1K4OA

Crystal structure of 3,4-dihydroxy-2-butanone 4-phosphate synthase in complex with one manganese, and a glycerol
Total Genus 67
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
67
sequence length
216
structure length
216
Chain Sequence
FDAIPDVIQAFKNGEFVVVLDDPSRENEADLIIAAESVTTEQMAFMVRHSSGLICAPLTPERTTALDLPQMVTHNADPRGTAYTVSVDAEHPSTTTGISAHDRALACRMLAAPDAQPSHFRRPGHVFPLRAVAGGVRARRGHTEAGVELCRLAGKRPVAVISEIVDDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCTIEDMIAHVEKTEGKL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Isomerase
molecule keywords 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase
publication title Structural definition of the active site and catalytic mechanism of 3,4-dihydroxy-2-butanone-4-phosphate synthase.
pubmed doi rcsb
source organism Magnaporthe grisea
total genus 67
structure length 216
sequence length 216
ec nomenclature ec 4.1.99.12: 3,4-dihydroxy-2-butanone-4-phosphate synthase.
pdb deposition date 2001-10-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00926 DHBP_synthase 3,4-dihydroxy-2-butanone 4-phosphate synthase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.870.10 Alpha Beta Alpha-Beta Complex DHBP synthase DHBP synthase 1k4oA00
1IEZA 4P8EA 3LRJA 4E1BA 1K4IA 2RIUA 3L7VA 3MIOA 3LQUA 2MX1A 2RISA 1K4LA 1K4PA 3AJEA 4I14A 1PVYA 1TKSA 4FFJA 1K7JA 1G57A 4P8JA 4P6CA 1SNNA 1K4OA 1PVWA 4P6PA 2EQAA 4P6DA 1TKUA 1HRUA 1K49A 1KK9A 4P77A 1JCUA 3MGZA 3H07A 3LS6A 1G58A 3MK5A
chains in the Genus database with same CATH superfamily
1IEZA 4P8EA 3LRJA 3TTCA 4E1BA 1K4IA 3VEOA 2RIUA 3L7VA 3MIOA 3LQUA 2MX1A 2RISA 1K4LA 1K4PA 3VF2A 3VTIA 3VTHA 3AJEA 4I14A 3VESA 3TTDA 1PVYA 3TSQA 1TKSA 3VETA 4FFJA 1K7JA 1G57A 4P8JA 3VENA 3VF4A 3VEXA 4P6CA 1SNNA 1K4OA 1PVWA 3TTFA 3VERA 4P6PA 2EQAA 4P6DA 3VEWA 1TKUA 1HRUA 3VEZA 1K49A 1KK9A 4P77A 3TSUA 1JCUA 3TSPA 3MGZA 3H07A 3LS6A 1G58A 3MK5A
chains in the Genus database with same CATH topology
1IEZA 4P8EA 3LRJA 3TTCA 4E1BA 1K4IA 3VEOA 2RIUA 3L7VA 3MIOA 3LQUA 2MX1A 2RISA 1K4LA 1K4PA 3VF2A 3VTIA 3VTHA 3AJEA 4I14A 3VESA 3TTDA 1PVYA 3TSQA 1TKSA 3VETA 4FFJA 1K7JA 1G57A 4P8JA 3VENA 3VF4A 3VEXA 4P6CA 1SNNA 1K4OA 1PVWA 3TTFA 3VERA 4P6PA 2EQAA 4P6DA 3VEWA 1TKUA 1HRUA 3VEZA 1K49A 1KK9A 4P77A 3TSUA 1JCUA 3TSPA 3MGZA 3H07A 3LS6A 1G58A 3MK5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1IEZ A;  4P8E A;  3LRJ A;  4E1B A;  1K4I A;  2RIU A;  3L7V A;  3MIO A;  3LQU A;  2MX1 A;  2RIS A;  1K4L A;  1K4P A;  3AJE A;  4I14 A;  1PVY A;  1TKS A;  4FFJ A;  1K7J A;  1G57 A;  4P8J A;  4P6C A;  1SNN A;  1K4O A;  1PVW A;  4P6P A;  2EQA A;  4P6D A;  1TKU A;  1HRU A;  1K49 A;  1KK9 A;  4P77 A;  1JCU A;  3MGZ A;  3H07 A;  3LS6 A;  1G58 A;  3MK5 A; 
#chains in the Genus database with same CATH topology
 1IEZ A;  4P8E A;  3LRJ A;  3TTC A;  4E1B A;  1K4I A;  3VEO A;  2RIU A;  3L7V A;  3MIO A;  3LQU A;  2MX1 A;  2RIS A;  1K4L A;  1K4P A;  3VF2 A;  3VTI A;  3VTH A;  3AJE A;  4I14 A;  3VES A;  3TTD A;  1PVY A;  3TSQ A;  1TKS A;  3VET A;  4FFJ A;  1K7J A;  1G57 A;  4P8J A;  3VEN A;  3VF4 A;  3VEX A;  4P6C A;  1SNN A;  1K4O A;  1PVW A;  3TTF A;  3VER A;  4P6P A;  2EQA A;  4P6D A;  3VEW A;  1TKU A;  1HRU A;  3VEZ A;  1K49 A;  1KK9 A;  4P77 A;  3TSU A;  1JCU A;  3TSP A;  3MGZ A;  3H07 A;  3LS6 A;  1G58 A;  3MK5 A; 
#chains in the Genus database with same CATH homology
 1IEZ A;  4P8E A;  3LRJ A;  3TTC A;  4E1B A;  1K4I A;  3VEO A;  2RIU A;  3L7V A;  3MIO A;  3LQU A;  2MX1 A;  2RIS A;  1K4L A;  1K4P A;  3VF2 A;  3VTI A;  3VTH A;  3AJE A;  4I14 A;  3VES A;  3TTD A;  1PVY A;  3TSQ A;  1TKS A;  3VET A;  4FFJ A;  1K7J A;  1G57 A;  4P8J A;  3VEN A;  3VF4 A;  3VEX A;  4P6C A;  1SNN A;  1K4O A;  1PVW A;  3TTF A;  3VER A;  4P6P A;  2EQA A;  4P6D A;  3VEW A;  1TKU A;  1HRU A;  3VEZ A;  1K49 A;  1KK9 A;  4P77 A;  3TSU A;  1JCU A;  3TSP A;  3MGZ A;  3H07 A;  3LS6 A;  1G58 A;  3MK5 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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