1K8TA

Crystal structure of the adenylyl cyclase domain of anthrax edema factor (ef)
Total Genus 147
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
147
sequence length
509
structure length
498
Chain Sequence
DRIDVLKGEKALKASGLVPEHADAFKKIARELNTYILFRPVNKLATNLIKSGVATKGLNVHGKSSDWGPVAGYIPFDQDLSKKHGQQLAVEKGNLENKKSITEHEGEIGKIPLKLDHLRIEELKENGIILKGKKEIDNGKKYYLLESNNQVYEFRISDENNEVQYKTKEGKITVLGEKFNWRNIEVMAKNVEGVLKPLTADYDLFALAPSLTEIKKQIPQKEWDKVVNTPNSLEKQKGVTNLLIKYGIERKPDSTKGTLSNWQKQMLDRLNEAVKYTGYTGGDVVNHGTNEIFIINPEGEFILTKNWEMTGRFIEKNITGKDYLYYFNRSYNKIAPGNKAYIEWTDPITKAKINTIPTSAEFIKNLSSIRRSSNVGVYKDSGDKDEFAKKESVKKIAGYLSDYYNSANHIFSQEKKRKISIFRGIQAYNEIENVLKSKQIAPEYKNYFQYLKERITNQVQLLLTHQKSNIEFKLLYKQLNFTENETDNFEVFQKIIDE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Toxin,lyase
source organism Bacillus anthracis
publication title Structural basis for the activation of anthrax adenylyl cyclase exotoxin by calmodulin
pubmed doi rcsb
molecule keywords CALMODULIN-SENSITIVE ADENYLATE CYCLASE
total genus 147
structure length 498
sequence length 509
ec nomenclature ec 4.6.1.1: Adenylate cyclase.
pdb deposition date 2001-10-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03497 Anthrax_toxA Anthrax toxin LF subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.140.60 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A; domain 3 1k8tA03
3.90.1760.10 Alpha Beta Alpha-Beta Complex Adenylylcyclase toxin fold Anthrax toxin, edema factor, central domain 1k8tA02
1K93A 1XFZA 2COLA 1XFUA 1ZOTA 1K90A 1XFWA 1LVCA 1XFVA 1Y0VA 1S26A 1K8TA 1XFXA 1XFYA 1PK0A 1YRUA 1YRTA 1SK6A
chains in the Genus database with same CATH superfamily
2E0AA 4KSFA 4P79A 4MPCA 2R05A 1SIRA 3UBRA 4JEKA 1EGDA 3LG1A 2RF7A 4X28A 2VR0A 4HKRA 3UU9A 4V25A 1FS7A 2PO4A 3PFDA 4ZXVA 2YYMA 2D29A 2BU5A 2CJ6A 2CX9A 1GKZA 3B96A 4JIOA 4LQSB 4AKGA 3MXLA 2Z1QA 2HJNA 2VIGA 5GJWE 2IX5A 1XG2B 1XFZA 2EBHX 1GKXA 4Q1OA 1JQIA 4HKSA 2YYLA 1R3BA 2CJ8A 2OT4A 2A1TA 3R7KA 1RJ4A 4AKHA 2BU7A 2DVLA 1EGCA 4J1VA 2QR4A 1SC5A 1XFVA 4IRNA 2R0MA 4DOYA 4FF2A 2ZAFA 3CRKA 4F0XA 4FF4A 1FS8A 3D6BA 1Y8PA 3C3LA 2C0UA 2UXWA 1SIQA 4W9UA 1UKWA 1UDYA 5M4PA 1XFWA 3SWOA 1U8VA 3MDDA 4FZ4A 1XFXA 3TZ0A 1XFYA 2JBRA 2WBIA 4XVXA 3VADA 2RDZA 2RFQA 4FF1A 1X90A 1X91A 4Q4UA 1QDBA 4H81A 3OWAA 2FP1A 4N5FA 3GM6A 2JBTA 1X8ZA 4Q17A 5J6AA 2XS1A 1YRUA 3D9EA 4WJYA 3TORA 2OEVA 3OWMA 1Y8NA 3AFFA 4Q5BA 5K3JA 5M4NA 2YYIA 3TTBA 2ZDXA 5GJVE 1PK0A 3SCEA 4V26A 3CE2A 3C2PA 2COLA 1GJVA 2LFWA 3D9GA 5B6BA 1ZOTA 3TZ5A 4L38A 2Q8IA 2EC5A 3S7WA 1PI1A 2F6LA 1R2JA 1FS9A 1YRTA 2E80A 2XQRB 4H7QA 1JM6A 3LGQA 3VKGA 3X0XA 2IX6A 2BU6A 4KCFA 2XS8A 1RP3A 1K8TA 1IVHA 2GBBA 2PNRA 4E00A 2EBFX 4AI6A 4LQQB 3SXQA 3X29A 3MKHA 3N0RA 2R03A 1GU6A 2OEXA 3HWCA 1IS2A 4G5EA 4MP2A 4KS9A 1LVCA 2Q8GA 3FO3A 4ZYJA 4L3ZA 5BRMA 4MPNA 1EGEA 3EONA 4X28C 2ZO5A 1SK6A 2YGWA 4G97A 3GQTA 2FP2A 2JBSA 3KMLA 1K90A 2BU2A 4H85A 3CRLA 2R0NA 4KSAA 5K3IA 3M9VA 5B5WA 3F29A 3VKHA 5M4KA 2J7AA 3D9DA 3C46A 3MPJA 2E81A 4P13A 4E02A 1T9GA 2CJ4A 2YYGA 3Q24A 3Q0AA 1S26A 4HR3A 3MDEA 3P4TA 4L1FA 2YYKA 4QICA 2Q8HA 5BRKA 2CJ5A 2VF1A 2R02A 3FCJA 3D9FA 4M9AA 1BUCA 2YYJA 4NXLA 4OO2A 2CJ7A 2AO2A 2ZKJA 3BNJA 3Q22A 2REHA 3TZ2A 3BNHA 1OAHA 2BTZA 4FF3A 1RJ1A 3L1TA 4DZYA 2Q8FA 1Y0VA 4U83A 2EBAA 5B5VA 1RX0A 2OJQA 4IV6A 3SF6A 4E01A 3GNCA 3NF4A 2DDHA 2ZDYA 3BNGA 1K93A 4L3YA 2BU8A 1Y8OA 2C12A 4KTOA 3OIBA 2OR0A 5M4MA 2JIFA 3EOMA 5K3GA 4Q0TA 3MPIA 4O5MA 1XFUA 3D2RA 3TZ4A 3II9A 3Q23A 4AKIA 4L3XA 4RM7A 2PG0A 1WS9A 4MP7A 4Q5CA 3AFEA 2FONA 3MMOA 4JIZA 1W07A 5K3HA 2AZEA 3RKHA 5J71A 4MPEA 3X0YA 3D1IA 3BNFA
chains in the Genus database with same CATH topology
2VF1A 3VKGA 4KSFA 4P79A 1XFWA 2AO2A 1RP3A 1K8TA 1XFXA 1XFYA 2GBBA 4FZ4A 3Q22A 2EBFX 4HKRA 4AI6A 3X29A 4FF1A 4FF4A 2PO4A 3N0RA 4FF3A 2FP1A 4KS9A 1LVCA 1Y0VA 4AKGA 1YRUA 4G97A 1SK6A 2YGWA 5GJWE 1K93A 1XFZA 2FP2A 2EBHX 3KMLA 1K90A 4HKSA 5GJVE 1XFUA 1PK0A 4KSAA 3C2PA 3CE2A 3Q23A 4AKIA 4AKHA 2COLA 3VKHA 2QR4A 3C46A 2LFWA 1SC5A 1ZOTA 1XFVA 3Q24A 2EC5A 3Q0AA 2AZEA 1S26A 4F0XA 4FF2A 2F6LA 1YRTA 4QICA 3C3LA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1K93 A;  1XFZ A;  2COL A;  1XFU A;  1ZOT A;  1K90 A;  1XFW A;  1LVC A;  1XFV A;  1Y0V A;  1S26 A;  1K8T A;  1XFX A;  1XFY A;  1PK0 A;  1YRU A;  1YRT A;  1SK6 A; 
#chains in the Genus database with same CATH topology
 2E0A A;  4KSF A;  4P79 A;  4MPC A;  2R05 A;  1SIR A;  3UBR A;  4JEK A;  1EGD A;  3LG1 A;  2RF7 A;  4X28 A;  2VR0 A;  4HKR A;  3UU9 A;  4V25 A;  1FS7 A;  2PO4 A;  3PFD A;  4ZXV A;  2YYM A;  2D29 A;  2BU5 A;  2CJ6 A;  2CX9 A;  1GKZ A;  3B96 A;  4JIO A;  4LQS B;  4AKG A;  3MXL A;  2Z1Q A;  2HJN A;  2VIG A;  5GJW E;  2IX5 A;  1XG2 B;  1XFZ A;  2EBH X;  1GKX A;  4Q1O A;  1JQI A;  4HKS A;  2YYL A;  1R3B A;  2CJ8 A;  2OT4 A;  2A1T A;  3R7K A;  1RJ4 A;  4AKH A;  2BU7 A;  2DVL A;  1EGC A;  4J1V A;  2QR4 A;  1SC5 A;  1XFV A;  4IRN A;  2R0M A;  4DOY A;  4FF2 A;  2ZAF A;  3CRK A;  4F0X A;  4FF4 A;  1FS8 A;  3D6B A;  1Y8P A;  3C3L A;  2C0U A;  2UXW A;  1SIQ A;  4W9U A;  1UKW A;  1UDY A;  5M4P A;  1XFW A;  3SWO A;  1U8V A;  3MDD A;  4FZ4 A;  1XFX A;  3TZ0 A;  1XFY A;  2JBR A;  2WBI A;  4XVX A;  3VAD A;  2RDZ A;  2RFQ A;  4FF1 A;  1X90 A;  1X91 A;  4Q4U A;  1QDB A;  4H81 A;  3OWA A;  2FP1 A;  4N5F A;  3GM6 A;  2JBT A;  1X8Z A;  4Q17 A;  5J6A A;  2XS1 A;  1YRU A;  3D9E A;  4WJY A;  3TOR A;  2OEV A;  3OWM A;  1Y8N A;  3AFF A;  4Q5B A;  5K3J A;  5M4N A;  2YYI A;  3TTB A;  2ZDX A;  5GJV E;  1PK0 A;  3SCE A;  4V26 A;  3CE2 A;  3C2P A;  2COL A;  1GJV A;  2LFW A;  3D9G A;  5B6B A;  1ZOT A;  3TZ5 A;  4L38 A;  2Q8I A;  2EC5 A;  3S7W A;  1PI1 A;  2F6L A;  1R2J A;  1FS9 A;  1YRT A;  2E80 A;  2XQR B;  4H7Q A;  1JM6 A;  3LGQ A;  3VKG A;  3X0X A;  2IX6 A;  2BU6 A;  4KCF A;  2XS8 A;  1RP3 A;  1K8T A;  1IVH A;  2GBB A;  2PNR A;  4E00 A;  2EBF X;  4AI6 A;  4LQQ B;  3SXQ A;  3X29 A;  3MKH A;  3N0R A;  2R03 A;  1GU6 A;  2OEX A;  3HWC A;  1IS2 A;  4G5E A;  4MP2 A;  4KS9 A;  1LVC A;  2Q8G A;  3FO3 A;  4ZYJ A;  4L3Z A;  5BRM A;  4MPN A;  1EGE A;  3EON A;  4X28 C;  2ZO5 A;  1SK6 A;  2YGW A;  4G97 A;  3GQT A;  2FP2 A;  2JBS A;  3KML A;  1K90 A;  2BU2 A;  4H85 A;  3CRL A;  2R0N A;  4KSA A;  5K3I A;  3M9V A;  5B5W A;  3F29 A;  3VKH A;  5M4K A;  2J7A A;  3D9D A;  3C46 A;  3MPJ A;  2E81 A;  4P13 A;  4E02 A;  1T9G A;  2CJ4 A;  2YYG A;  3Q24 A;  3Q0A A;  1S26 A;  4HR3 A;  3MDE A;  3P4T A;  4L1F A;  2YYK A;  4QIC A;  2Q8H A;  5BRK A;  2CJ5 A;  2VF1 A;  2R02 A;  3FCJ A;  3D9F A;  4M9A A;  1BUC A;  2YYJ A;  4NXL A;  4OO2 A;  2CJ7 A;  2AO2 A;  2ZKJ A;  3BNJ A;  3Q22 A;  2REH A;  3TZ2 A;  3BNH A;  1OAH A;  2BTZ A;  4FF3 A;  1RJ1 A;  3L1T A;  4DZY A;  2Q8F A;  1Y0V A;  4U83 A;  2EBA A;  5B5V A;  1RX0 A;  2OJQ A;  4IV6 A;  3SF6 A;  4E01 A;  3GNC A;  3NF4 A;  2DDH A;  2ZDY A;  3BNG A;  1K93 A;  4L3Y A;  2BU8 A;  1Y8O A;  2C12 A;  4KTO A;  3OIB A;  2OR0 A;  5M4M A;  2JIF A;  3EOM A;  5K3G A;  4Q0T A;  3MPI A;  4O5M A;  1XFU A;  3D2R A;  3TZ4 A;  3II9 A;  3Q23 A;  4AKI A;  4L3X A;  4RM7 A;  2PG0 A;  1WS9 A;  4MP7 A;  4Q5C A;  3AFE A;  2FON A;  3MMO A;  4JIZ A;  1W07 A;  5K3H A;  2AZE A;  3RKH A;  5J71 A;  4MPE A;  3X0Y A;  3D1I A;  3BNF A; 
#chains in the Genus database with same CATH homology
 2VF1 A;  3VKG A;  4KSF A;  4P79 A;  1XFW A;  2AO2 A;  1RP3 A;  1K8T A;  1XFX A;  1XFY A;  2GBB A;  4FZ4 A;  3Q22 A;  2EBF X;  4HKR A;  4AI6 A;  3X29 A;  4FF1 A;  4FF4 A;  2PO4 A;  3N0R A;  4FF3 A;  2FP1 A;  4KS9 A;  1LVC A;  1Y0V A;  4AKG A;  1YRU A;  4G97 A;  1SK6 A;  2YGW A;  5GJW E;  1K93 A;  1XFZ A;  2FP2 A;  2EBH X;  3KML A;  1K90 A;  4HKS A;  5GJV E;  1XFU A;  1PK0 A;  4KSA A;  3C2P A;  3CE2 A;  3Q23 A;  4AKI A;  4AKH A;  2COL A;  3VKH A;  2QR4 A;  3C46 A;  2LFW A;  1SC5 A;  1ZOT A;  1XFV A;  3Q24 A;  2EC5 A;  3Q0A A;  2AZE A;  1S26 A;  4F0X A;  4FF2 A;  2F6L A;  1YRT A;  4QIC A;  3C3L A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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