1K8TA

Crystal structure of the adenylyl cyclase domain of anthrax edema factor (ef)
Total Genus 147
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
147
sequence length
509
structure length
498
Chain Sequence
DRIDVLKGEKALKASGLVPEHADAFKKIARELNTYILFRPVNKLATNLIKSGVATKGLNVHGKSSDWGPVAGYIPFDQDLSKKHGQQLAVEKGNLENKKSITEHEGEIGKIPLKLDHLRIEELKENGIILKGKKEIDNGKKYYLLESNNQVYEFRISDENNEVQYKTKEGKITVLGEKFNWRNIEVMAKNVEGVLKPLTADYDLFALAPSLTEIKKQIPQKEWDKVVNTPNSLEKQKGVTNLLIKYGIERKPDSTKGTLSNWQKQMLDRLNEAVKYTGYTGGDVVNHGTNEIFIINPEGEFILTKNWEMTGRFIEKNITGKDYLYYFNRSYNKIAPGNKAYIEWTDPITKAKINTIPTSAEFIKNLSSIRRSSNVGVYKDSGDKDEFAKKESVKKIAGYLSDYYNSANHIFSQEKKRKISIFRGIQAYNEIENVLKSKQIAPEYKNYFQYLKERITNQVQLLLTHQKSNIEFKLLYKQLNFTENETDNFEVFQKIIDE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis for the activation of anthrax adenylyl cyclase exotoxin by calmodulin
pubmed doi rcsb
molecule keywords CALMODULIN-SENSITIVE ADENYLATE CYCLASE
source organism Bacillus anthracis
molecule tags Toxin,lyase
total genus 147
structure length 498
sequence length 509
ec nomenclature ec 4.6.1.1: Adenylate cyclase.
pdb deposition date 2001-10-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03497 Anthrax_toxA Anthrax toxin LF subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.140.60 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A; domain 3 1k8tA03
3.90.1760.10 Alpha Beta Alpha-Beta Complex Adenylylcyclase toxin fold Anthrax toxin, edema factor, central domain 1k8tA02
1Y0VA 1ZOTA 1LVCA 1K90A 1XFZA 1PK0A 1K93A 1XFXA 1XFVA 1YRUA 1XFYA 1XFWA 1S26A 1XFUA 1YRTA 1SK6A 1K8TA 2COLA
chains in the Genus database with same CATH superfamily
4M9AA 2LFWA 5M4NA 1FS8A 2E81A 3SF6A 1YRUA 3Q23A 4JIOA 4H85A 2REHA 4ZXVA 2EBFX 3TTBA 1FS9A 3MDDA 4HR3A 2RDZA 4KSAA 3LGQA 4HKSA 2YYKA 2PG0A 3TZ0A 2XS8A 2Z1QA 2BTZA 1Y0VA 2CJ7A 3II9A 3OWAA 2YYJA 1Y8PA 2VR0A 3D6BA 3GM6A 3SCEA 1R3BA 3L1TA 3OIBA 5BRKA 1XFWA 1S26A 1Y8OA 2E0AA 2OEVA 1GKXA 2QR4A 3AFFA 4IRNA 2COLA 2VIGA 1UDYA 1W07A 4X28C 3P4TA 4L3YA 5B5VA 5J6AA 3CE2A 3GNCA 3M9VA 2D29A 4WJYA 3FO3A 3VADA 3TORA 3MKHA 2GBBA 2R03A 3CRLA 2OJQA 1WS9A 5B5WA 3LG1A 1UKWA 1EGEA 2JBRA 2AO2A 2EC5A 4JIZA 4N5FA 1XFYA 5GJVE 3SXQA 2F6LA 4DOYA 5K3IA 4Q5CA 2FP2A 2OEXA 4HKRA 1RX0A 4P13A 3TZ5A 3VKGA 4XVXA 4H81A 3C46A 2R0NA 2JIFA 2A1TA 2PNRA 2WBIA 4U83A 4FF2A 5M4KA 2AZEA 2DDHA 2EBHX 2YYMA 5J71A 2BU8A 4G97A 3SWOA 4ZYJA 1OAHA 3NF4A 3KMLA 2Q8GA 1XG2B 2E80A 1X90A 4L38A 1JM6A 4NXLA 3TZ2A 3CRKA 2RFQA 3Q0AA 4FF4A 3B96A 2CJ4A 3MPIA 3C2PA 3D1IA 2JBTA 3RKHA 4MP2A 5BRMA 4KCFA 3MDEA 4JEKA 5K3JA 4E02A 1XFVA 3OWMA 4E01A 1LVCA 5K3GA 4Q5BA 1BUCA 4W9UA 1RJ1A 2ZDYA 4LQQB 5GJWE 5K3HA 3Q22A 4FZ4A 2Q8IA 1SIRA 2R0MA 1QDBA 2YYIA 5M4MA 2CJ6A 3D9GA 4V26A 2R02A 1GKZA 2RF7A 1FS7A 2ZO5A 4X28A 3VKHA 1ZOTA 2FONA 4Q0TA 1IVHA 1EGCA 3TZ4A 4LQSB 1X8ZA 3UU9A 4Q17A 2R05A 1SK6A 2IX6A 3Q24A 3FCJA 4MP7A 4V25A 3S7WA 1Y8NA 4FF1A 2BU5A 1PI1A 3BNGA 2YYGA 3D9EA 4O5MA 5M4PA 2C12A 2BU6A 4J1VA 4AI6A 3D2RA 4L1FA 4MPCA 4Q4UA 2XQRB 1GJVA 3D9FA 3EONA 3MXLA 2CJ8A 2FP1A 3BNFA 1K93A 1JQIA 3AFEA 4AKHA 4H7QA 1T9GA 4MPNA 4AKIA 2DVLA 3MPJA 2YYLA 4OO2A 1GU6A 2HJNA 4KSFA 2Q8HA 4L3XA 2BU7A 1U8VA 2XS1A 2IX5A 3D9DA 1IS2A 3PFDA 4KTOA 4Q1OA 1XFUA 1YRTA 2JBSA 1RP3A 2OR0A 1SIQA 3BNHA 4P79A 3R7KA 3C3LA 3BNJA 4AKGA 3X29A 2UXWA 1PK0A 3N0RA 1RJ4A 2J7AA 2ZAFA 4FF3A 4QICA 4MPEA 2Q8FA 5B6BA 3F29A 2CJ5A 4DZYA 2PO4A 2CX9A 3EOMA 1XFXA 3MMOA 4E00A 1EGDA 2EBAA 1XFZA 4G5EA 4L3ZA 4F0XA 3UBRA 1K8TA 4KS9A 1R2JA 1SC5A 2ZDXA 2ZKJA 2C0UA 1K90A 3GQTA 4RM7A 3HWCA 3X0YA 4IV6A 1X91A 2BU2A 2YGWA 3X0XA 2VF1A 2OT4A
chains in the Genus database with same CATH topology
1LVCA 4AKIA 2GBBA 4KSFA 2LFWA 5GJWE 4FZ4A 5GJVE 3Q22A 2AO2A 2EC5A 3VKGA 3Q23A 1XFYA 1YRUA 1XFUA 2F6LA 1YRTA 2FP2A 1RP3A 4HKRA 4P79A 2EBFX 4AKGA 3C3LA 3VKHA 1ZOTA 3C46A 4KSAA 3X29A 1PK0A 3N0RA 4FF2A 4HKSA 2AZEA 4FF3A 2EBHX 4QICA 1SK6A 4G97A 1Y0VA 3Q24A 3KMLA 2PO4A 4FF1A 4FF4A 1XFXA 3Q0AA 1XFZA 1XFWA 1S26A 4F0XA 4AI6A 1K8TA 2QR4A 4KS9A 1SC5A 2COLA 1K90A 3C2PA 2FP1A 3CE2A 2YGWA 1K93A 4AKHA 2VF1A 1XFVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1Y0V A;  1ZOT A;  1LVC A;  1K90 A;  1XFZ A;  1PK0 A;  1K93 A;  1XFX A;  1XFV A;  1YRU A;  1XFY A;  1XFW A;  1S26 A;  1XFU A;  1YRT A;  1SK6 A;  1K8T A;  2COL A; 
#chains in the Genus database with same CATH topology
 4M9A A;  2LFW A;  5M4N A;  1FS8 A;  2E81 A;  3SF6 A;  1YRU A;  3Q23 A;  4JIO A;  4H85 A;  2REH A;  4ZXV A;  2EBF X;  3TTB A;  1FS9 A;  3MDD A;  4HR3 A;  2RDZ A;  4KSA A;  3LGQ A;  4HKS A;  2YYK A;  2PG0 A;  3TZ0 A;  2XS8 A;  2Z1Q A;  2BTZ A;  1Y0V A;  2CJ7 A;  3II9 A;  3OWA A;  2YYJ A;  1Y8P A;  2VR0 A;  3D6B A;  3GM6 A;  3SCE A;  1R3B A;  3L1T A;  3OIB A;  5BRK A;  1XFW A;  1S26 A;  1Y8O A;  2E0A A;  2OEV A;  1GKX A;  2QR4 A;  3AFF A;  4IRN A;  2COL A;  2VIG A;  1UDY A;  1W07 A;  4X28 C;  3P4T A;  4L3Y A;  5B5V A;  5J6A A;  3CE2 A;  3GNC A;  3M9V A;  2D29 A;  4WJY A;  3FO3 A;  3VAD A;  3TOR A;  3MKH A;  2GBB A;  2R03 A;  3CRL A;  2OJQ A;  1WS9 A;  5B5W A;  3LG1 A;  1UKW A;  1EGE A;  2JBR A;  2AO2 A;  2EC5 A;  4JIZ A;  4N5F A;  1XFY A;  5GJV E;  3SXQ A;  2F6L A;  4DOY A;  5K3I A;  4Q5C A;  2FP2 A;  2OEX A;  4HKR A;  1RX0 A;  4P13 A;  3TZ5 A;  3VKG A;  4XVX A;  4H81 A;  3C46 A;  2R0N A;  2JIF A;  2A1T A;  2PNR A;  2WBI A;  4U83 A;  4FF2 A;  5M4K A;  2AZE A;  2DDH A;  2EBH X;  2YYM A;  5J71 A;  2BU8 A;  4G97 A;  3SWO A;  4ZYJ A;  1OAH A;  3NF4 A;  3KML A;  2Q8G A;  1XG2 B;  2E80 A;  1X90 A;  4L38 A;  1JM6 A;  4NXL A;  3TZ2 A;  3CRK A;  2RFQ A;  3Q0A A;  4FF4 A;  3B96 A;  2CJ4 A;  3MPI A;  3C2P A;  3D1I A;  2JBT A;  3RKH A;  4MP2 A;  5BRM A;  4KCF A;  3MDE A;  4JEK A;  5K3J A;  4E02 A;  1XFV A;  3OWM A;  4E01 A;  1LVC A;  5K3G A;  4Q5B A;  1BUC A;  4W9U A;  1RJ1 A;  2ZDY A;  4LQQ B;  5GJW E;  5K3H A;  3Q22 A;  4FZ4 A;  2Q8I A;  1SIR A;  2R0M A;  1QDB A;  2YYI A;  5M4M A;  2CJ6 A;  3D9G A;  4V26 A;  2R02 A;  1GKZ A;  2RF7 A;  1FS7 A;  2ZO5 A;  4X28 A;  3VKH A;  1ZOT A;  2FON A;  4Q0T A;  1IVH A;  1EGC A;  3TZ4 A;  4LQS B;  1X8Z A;  3UU9 A;  4Q17 A;  2R05 A;  1SK6 A;  2IX6 A;  3Q24 A;  3FCJ A;  4MP7 A;  4V25 A;  3S7W A;  1Y8N A;  4FF1 A;  2BU5 A;  1PI1 A;  3BNG A;  2YYG A;  3D9E A;  4O5M A;  5M4P A;  2C12 A;  2BU6 A;  4J1V A;  4AI6 A;  3D2R A;  4L1F A;  4MPC A;  4Q4U A;  2XQR B;  1GJV A;  3D9F A;  3EON A;  3MXL A;  2CJ8 A;  2FP1 A;  3BNF A;  1K93 A;  1JQI A;  3AFE A;  4AKH A;  4H7Q A;  1T9G A;  4MPN A;  4AKI A;  2DVL A;  3MPJ A;  2YYL A;  4OO2 A;  1GU6 A;  2HJN A;  4KSF A;  2Q8H A;  4L3X A;  2BU7 A;  1U8V A;  2XS1 A;  2IX5 A;  3D9D A;  1IS2 A;  3PFD A;  4KTO A;  4Q1O A;  1XFU A;  1YRT A;  2JBS A;  1RP3 A;  2OR0 A;  1SIQ A;  3BNH A;  4P79 A;  3R7K A;  3C3L A;  3BNJ A;  4AKG A;  3X29 A;  2UXW A;  1PK0 A;  3N0R A;  1RJ4 A;  2J7A A;  2ZAF A;  4FF3 A;  4QIC A;  4MPE A;  2Q8F A;  5B6B A;  3F29 A;  2CJ5 A;  4DZY A;  2PO4 A;  2CX9 A;  3EOM A;  1XFX A;  3MMO A;  4E00 A;  1EGD A;  2EBA A;  1XFZ A;  4G5E A;  4L3Z A;  4F0X A;  3UBR A;  1K8T A;  4KS9 A;  1R2J A;  1SC5 A;  2ZDX A;  2ZKJ A;  2C0U A;  1K90 A;  3GQT A;  4RM7 A;  3HWC A;  3X0Y A;  4IV6 A;  1X91 A;  2BU2 A;  2YGW A;  3X0X A;  2VF1 A;  2OT4 A; 
#chains in the Genus database with same CATH homology
 1LVC A;  4AKI A;  2GBB A;  4KSF A;  2LFW A;  5GJW E;  4FZ4 A;  5GJV E;  3Q22 A;  2AO2 A;  2EC5 A;  3VKG A;  3Q23 A;  1XFY A;  1YRU A;  1XFU A;  2F6L A;  1YRT A;  2FP2 A;  1RP3 A;  4HKR A;  4P79 A;  2EBF X;  4AKG A;  3C3L A;  3VKH A;  1ZOT A;  3C46 A;  4KSA A;  3X29 A;  1PK0 A;  3N0R A;  4FF2 A;  4HKS A;  2AZE A;  4FF3 A;  2EBH X;  4QIC A;  1SK6 A;  4G97 A;  1Y0V A;  3Q24 A;  3KML A;  2PO4 A;  4FF1 A;  4FF4 A;  1XFX A;  3Q0A A;  1XFZ A;  1XFW A;  1S26 A;  4F0X A;  4AI6 A;  1K8T A;  2QR4 A;  4KS9 A;  1SC5 A;  2COL A;  1K90 A;  3C2P A;  2FP1 A;  3CE2 A;  2YGW A;  1K93 A;  4AKH A;  2VF1 A;  1XFV A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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