1KDXA

Kix domain of mouse cbp (creb binding protein) in complex with phosphorylated kinase inducible domain (pkid) of rat creb (cyclic amp response element binding protein), nmr 17 structures
Total Genus 32
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
32
sequence length
81
structure length
81
Chain Sequence
GVRKGWHEHVTQDLRSHLVHKLVQAIFPTPDPAALKDRRMENLVAYAKKVEGDMYESANSRDEYYHLLAEKIYKIQKELEE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transcription regulation complex
molecule keywords CBP
publication title Solution structure of the KIX domain of CBP bound to the transactivation domain of CREB: a model for activator:coactivator interactions.
pubmed doi rcsb
source organism Mus musculus
total genus 32
structure length 81
sequence length 81
ec nomenclature ec 2.3.1.48: Histone acetyltransferase.
pdb deposition date 1997-09-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02172 KIX KIX domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.20 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Coactivator CBP, KIX domain 1kdxA00
2AGHB 2GUTA 1SB0A 4D7XA 2LXTA 4I9OA 2LQHA 2LXSA 2KWFA 2LQIA 2K0NA 1KDXA
chains in the Genus database with same CATH superfamily
1AO6A 1IJGA 2BXOA 4LA0A 4J2VA 1E7GA 4LUFA 1HK2A 4FJCB 4DM0A 4S1YA 1JNBA 4ZC6A 1UORA 1TXUA 3CX9A 3V03A 3NMUA 3JQZA 2QHBA 3FWBC 2VUEA 3LU6A 5FUOA 2BXGA 5DBYA 1KXPD 3A73A 2KBZA 4G04A 1KDXA 3BPJA 4BKEA 5B5TA 4L9QA 3JRYA 5IJFA 3V08A 1BKEA 5GIPA 2YDFA 2XVQA 4GG2A 3B9MA 1TF0A 2JUHA 2XW0A 4NAWB 2I2ZA 1GNJA 2BXHA 4OTTA 1LOTA 4IW1A 2QMCA 2BXBA 4K71A 4LB9A 2K0NA 2BXDA 3GA9L 4K2CA 3UIVA 2OZBB 4JK4A 2GUTA 1E7FA 1SB0A 3W1SA 2XVWA 1MUHA 5BPKA 2BXEA 2XVVA 2QM6A 3KJLA 4C31B 1MM8A 2XW1A 4OR0A 3VQIA 3FNMA 1E78A 3NVMA 5GHKA 4HGKA 3SIUB 2CKXA 1MUSA 1BM0A 2LXTA 2DBUA 4I9OA 5IFOA 3M99C 2LQIA 4OT2A 4F5TA 3GQUA 3PLAA 1J7EA 1MIYA 2BXCA 4G01A 4EMXA 5IJEA 4TQ0A 2DYOA 5D7GA 2LQHA 3WHSA 3MHHB 1HK4A 4N0UD 4MBEC 5DQFA 4DHXB 2OT3A 2Z8KA 3LU7A 4WA6B 2NQOA 2LXSA 4F5VA 2BX8A 4FIPB 1HK5A 1FOUA 4OTUA 4ZCGA 4E99A 4PO0A 4TQ1A 2EFEA 4L8UA 2BXFA 1E7BA 4F5SA 4BY9C 2VDBA 3FWCC 3KIKA 4LUHA 4N3ZA 5ID7A 2I30A 1H9ZA 1HK1A 5IIXA 2BXPA 2XVUA 2Z8IA 4IW2A 2BXNA 1E7CA 1NT2B 3ICXA 3A75A 4FK5B 4ZBQA 3SIVB 2BXMA 2VUFA 1VZSA 2DG5A 2AGHB 4F5UA 5GIOA 4W4UB 2EFHA 3GQXA 3NVIA 4G03A 2V36A 2NNWA 5GINA 2XSIA 2EFCA 1GNIA 5IJ5A 2BXLA 5ID9A 2DBWA 4GDXA 2BXIA 2LOQA 1E7HA 1MIVA 2E0YA 4ZBKA 3LU8A 1KW2A 1H5WA 1LNSA 4HGMB 4LB2A 4ZUXV 4GDLB 2DBXA 1BJ5A 3H37A 1HA2A 3B9LA 5HOZA 3TDLA 4Z69A 1N5UA 4M70B 3V09A 1E7EA 3NVKA 3ECPA 3G9KD 1MA9A 1HK3A 2KWFA 2ROHA 2AJEA 2XMOA 1E7IA 5IIUA 1J78A 2BXKA 2EFDA 4D7XA 2DYMA 1O9XA 4ZBRA 2Z8JA 1MIWA 2BXAA 2BXQA 4Z9OA 3WHRA 3SQJA 3MHSB 1E7AA 5IIHA 3H3AA 4GDKB 3WHQA 4L9KA 2E0XA 1VFIA 4N0FD
chains in the Genus database with same CATH topology
2AGHB 2GUTA 1SB0A 4D7XA 2LXTA 4I9OA 2LQHA 2LXSA 2KWFA 2LQIA 2K0NA 1KDXA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2AGH B;  2GUT A;  1SB0 A;  4D7X A;  2LXT A;  4I9O A;  2LQH A;  2LXS A;  2KWF A;  2LQI A;  2K0N A;  1KDX A; 
#chains in the Genus database with same CATH topology
 1AO6 A;  1IJG A;  2BXO A;  4LA0 A;  4J2V A;  1E7G A;  4LUF A;  1HK2 A;  4FJC B;  4DM0 A;  4S1Y A;  1JNB A;  4ZC6 A;  1UOR A;  1TXU A;  3CX9 A;  3V03 A;  3NMU A;  3JQZ A;  2QHB A;  3FWB C;  2VUE A;  3LU6 A;  5FUO A;  2BXG A;  5DBY A;  1KXP D;  3A73 A;  2KBZ A;  4G04 A;  1KDX A;  3BPJ A;  4BKE A;  5B5T A;  4L9Q A;  3JRY A;  5IJF A;  3V08 A;  1BKE A;  5GIP A;  2YDF A;  2XVQ A;  4GG2 A;  3B9M A;  1TF0 A;  2JUH A;  2XW0 A;  4NAW B;  2I2Z A;  1GNJ A;  2BXH A;  4OTT A;  1LOT A;  4IW1 A;  2QMC A;  2BXB A;  4K71 A;  4LB9 A;  2K0N A;  2BXD A;  3GA9 L;  4K2C A;  3UIV A;  2OZB B;  4JK4 A;  2GUT A;  1E7F A;  1SB0 A;  3W1S A;  2XVW A;  1MUH A;  5BPK A;  2BXE A;  2XVV A;  2QM6 A;  3KJL A;  4C31 B;  1MM8 A;  2XW1 A;  4OR0 A;  3VQI A;  3FNM A;  1E78 A;  3NVM A;  5GHK A;  4HGK A;  3SIU B;  2CKX A;  1MUS A;  1BM0 A;  2LXT A;  2DBU A;  4I9O A;  5IFO A;  3M99 C;  2LQI A;  4OT2 A;  4F5T A;  3GQU A;  3PLA A;  1J7E A;  1MIY A;  2BXC A;  4G01 A;  4EMX A;  5IJE A;  4TQ0 A;  2DYO A;  5D7G A;  2LQH A;  3WHS A;  3MHH B;  1HK4 A;  4N0U D;  4MBE C;  5DQF A;  4DHX B;  2OT3 A;  2Z8K A;  3LU7 A;  4WA6 B;  2NQO A;  2LXS A;  4F5V A;  2BX8 A;  4FIP B;  1HK5 A;  1FOU A;  4OTU A;  4ZCG A;  4E99 A;  4PO0 A;  4TQ1 A;  2EFE A;  4L8U A;  2BXF A;  1E7B A;  4F5S A;  4BY9 C;  2VDB A;  3FWC C;  3KIK A;  4LUH A;  4N3Z A;  5ID7 A;  2I30 A;  1H9Z A;  1HK1 A;  5IIX A;  2BXP A;  2XVU A;  2Z8I A;  4IW2 A;  2BXN A;  1E7C A;  1NT2 B;  3ICX A;  3A75 A;  4FK5 B;  4ZBQ A;  3SIV B;  2BXM A;  2VUF A;  1VZS A;  2DG5 A;  2AGH B;  4F5U A;  5GIO A;  4W4U B;  2EFH A;  3GQX A;  3NVI A;  4G03 A;  2V36 A;  2NNW A;  5GIN A;  2XSI A;  2EFC A;  1GNI A;  5IJ5 A;  2BXL A;  5ID9 A;  2DBW A;  4GDX A;  2BXI A;  2LOQ A;  1E7H A;  1MIV A;  2E0Y A;  4ZBK A;  3LU8 A;  1KW2 A;  1H5W A;  1LNS A;  4HGM B;  4LB2 A;  4ZUX V;  4GDL B;  2DBX A;  1BJ5 A;  3H37 A;  1HA2 A;  3B9L A;  5HOZ A;  3TDL A;  4Z69 A;  1N5U A;  4M70 B;  3V09 A;  1E7E A;  3NVK A;  3ECP A;  3G9K D;  1MA9 A;  1HK3 A;  2KWF A;  2ROH A;  2AJE A;  2XMO A;  1E7I A;  5IIU A;  1J78 A;  2BXK A;  2EFD A;  4D7X A;  2DYM A;  1O9X A;  4ZBR A;  2Z8J A;  1MIW A;  2BXA A;  2BXQ A;  4Z9O A;  3WHR A;  3SQJ A;  3MHS B;  1E7A A;  5IIH A;  3H3A A;  4GDK B;  3WHQ A;  4L9K A;  2E0X A;  1VFI A;  4N0F D; 
#chains in the Genus database with same CATH homology
 2AGH B;  2GUT A;  1SB0 A;  4D7X A;  2LXT A;  4I9O A;  2LQH A;  2LXS A;  2KWF A;  2LQI A;  2K0N A;  1KDX A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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