1KNTA

The 1.6 angstroms structure of the kunitz-type domain from the alpha3 chain of the human type vi collagen
Total Genus 9
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
9
sequence length
55
structure length
55
Chain Sequence
TDICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVCA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Collagen type vi fragment
molecule keywords COLLAGEN TYPE VI
publication title The 1.6 A structure of Kunitz-type domain from the alpha 3 chain of human type VI collagen.
pubmed doi rcsb
source organism Homo sapiens
total genus 9
structure length 55
sequence length 55
ec nomenclature
pdb deposition date 1994-08-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00014 Kunitz_BPTI Kunitz/Bovine pancreatic trypsin inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
4.10.410.10 Few Secondary Structures Irregular Factor Xa Inhibitor Pancreatic trypsin inhibitor Kunitz domain 1kntA00
1CO7I 3AUHA 1YKTB 2ZVXA 1KTHA 4BNRI 1YLCB 2DDJA 4U32X 2ZJXA 1TCPA 1MTND 2JOTA 2KCRA 1OA65 1P2OB 1P2KI 1LD6A 3BTFI 4NTXB 3T62D 1G6XA 3TGJI 2PTCI 1BZ5A 2DDIA 1FAKI 3TGKI 1LD5A 3AUBA 5JB5A 1CA0D 4TPII 1PITA 2UUYB 1TOCR 8PTIA 2TPII 3TGII 3BTKI 2M01A 3TPII 4NTYB 2IJOI 1BRCI 1UUBA 3BTDI 3U1JE 3BTHI 4Y11I 1JV9A 3BTQI 3CI7A 1ADZA 1IRHA 4WXVC 3LDMA 1JC6A 1ZR0B 1Y62A 1BF0A 4BQDA 1KNTA 1ZJDB 1D0DA 1DEMA 2W8XA 1FANA 3P95E 7PTIA 2LFLA 1YLDB 1TPAI 2CA7A 2FI3I 3GYMI 3P92E 1EAWB 1BPIA 3AUDA 5JB4A 1SHPA 1BPTA 1D0DB 4WWYC 2FTLI 1AAPA 1JV8A 3FP6I 4DTGK 1YC0I 3BYBA 1BIKA 3FP7J 1BZXI 4ISNB 4Y0YI 4DG4C 1DENA 1CBWD 5PTIA 2FTMB 2HEXA 1KIGI 3AUGA 1TAWB 2M99A 3BTWI 1BHCA 2ODYE 3L33E 1NAGA 1K6UA 2R9PE 4NTWB 1BUNB 2KAII 1UUAA 3LDIA 1T7CB 1F5RI 1DTKA 4ISLB 3AUIA 1B0CA 2J6DA 1TFXC 2TGPI 4Y10I 4PTIA 2KNTA 3BTGI 1T8MB 1DTXA 3WNYA 2FI5I 4BD9B 3BTMI 2FI4I 1AALA 3OFWA 3BTEI 4ISOB 1P2NB 3BTTI 1P2QB 4U30W 1OA55 5JB7A 1F7ZI 1QLQA 1EJMB 1BRBI 5JB6A 2UUXA 1TAPA 3AUCA 1BTHP 1T8NB 5C67C 1P2JI 3D65I 2LFKA 1P2II 1T8OB 1P2MB 6PTIA 1FY8I 9PTIA 3L3TE 3AUEA 2RA3C 3M7QB 3FP8I 3OTJI 3UIRC 3LDJA 3UOUB 1BTIA 1T8LB 4Y0ZI 1KUNA
chains in the Genus database with same CATH superfamily
1CO7I 3AUHA 1YKTB 2ZVXA 1KTHA 4BNRI 1YLCB 2DDJA 4U32X 2ZJXA 1TCPA 1MTND 2JOTA 2KCRA 1OA65 1P2OB 1P2KI 1LD6A 3BTFI 4NTXB 3T62D 1G6XA 3TGJI 2PTCI 1BZ5A 2DDIA 1FAKI 3TGKI 1LD5A 3AUBA 5JB5A 1CA0D 4TPII 1PITA 2UUYB 1TOCR 8PTIA 2TPII 3TGII 3BTKI 2M01A 3TPII 4NTYB 2IJOI 1BRCI 1UUBA 3BTDI 3U1JE 3BTHI 4Y11I 1JV9A 3BTQI 3CI7A 1ADZA 1IRHA 4WXVC 3LDMA 1JC6A 1ZR0B 1Y62A 1BF0A 4BQDA 1KNTA 1ZJDB 1D0DA 1DEMA 2W8XA 1FANA 3P95E 7PTIA 2LFLA 1YLDB 1TPAI 2CA7A 2FI3I 3GYMI 3P92E 1EAWB 1BPIA 3AUDA 5JB4A 1SHPA 1BPTA 1D0DB 4WWYC 2FTLI 1AAPA 1JV8A 3FP6I 4DTGK 1YC0I 3BYBA 1BIKA 3FP7J 1BZXI 4ISNB 4Y0YI 4DG4C 1DENA 1CBWD 5PTIA 2FTMB 2HEXA 1KIGI 3AUGA 1TAWB 2M99A 3BTWI 1BHCA 2ODYE 3L33E 1NAGA 1K6UA 2R9PE 4NTWB 1BUNB 2KAII 1UUAA 3LDIA 1T7CB 1F5RI 1DTKA 4ISLB 3AUIA 1B0CA 2J6DA 1TFXC 2TGPI 4Y10I 4PTIA 2KNTA 3BTGI 1T8MB 1DTXA 3WNYA 2FI5I 4BD9B 3BTMI 2FI4I 1AALA 3OFWA 3BTEI 4ISOB 1P2NB 3BTTI 1P2QB 4U30W 1OA55 5JB7A 1F7ZI 1QLQA 1EJMB 1BRBI 5JB6A 2UUXA 1TAPA 3AUCA 1BTHP 1T8NB 5C67C 1P2JI 3D65I 2LFKA 1P2II 1T8OB 1P2MB 6PTIA 1FY8I 9PTIA 3L3TE 3AUEA 2RA3C 3M7QB 3FP8I 3OTJI 3UIRC 3LDJA 3UOUB 1BTIA 1T8LB 4Y0ZI 1KUNA
chains in the Genus database with same CATH topology
1CO7I 3AUHA 1YKTB 2ZVXA 1KTHA 4BNRI 1YLCB 2DDJA 4U32X 2ZJXA 1TCPA 1MTND 2JOTA 2KCRA 1OA65 1P2OB 1P2KI 1LD6A 3BTFI 4NTXB 3T62D 1G6XA 3TGJI 2PTCI 1BZ5A 2DDIA 1FAKI 3TGKI 1LD5A 3AUBA 5JB5A 1CA0D 4TPII 1PITA 2UUYB 1TOCR 8PTIA 2TPII 3TGII 3BTKI 2M01A 3TPII 4NTYB 2IJOI 1BRCI 1UUBA 3BTDI 3U1JE 3BTHI 4Y11I 1JV9A 3BTQI 3CI7A 1ADZA 1IRHA 4WXVC 3LDMA 1JC6A 1ZR0B 1Y62A 1BF0A 4BQDA 1KNTA 1ZJDB 1D0DA 1DEMA 2W8XA 1FANA 3P95E 7PTIA 2LFLA 1YLDB 1TPAI 2CA7A 2FI3I 3GYMI 3P92E 1EAWB 1BPIA 3AUDA 5JB4A 1SHPA 1BPTA 1D0DB 4WWYC 2FTLI 1AAPA 1JV8A 3FP6I 4DTGK 1YC0I 3BYBA 1BIKA 3FP7J 1BZXI 4ISNB 4Y0YI 4DG4C 1DENA 1CBWD 5PTIA 2FTMB 2HEXA 1KIGI 3AUGA 1TAWB 2M99A 3BTWI 1BHCA 2ODYE 3L33E 1NAGA 1K6UA 2R9PE 4NTWB 1BUNB 2KAII 1UUAA 3LDIA 1T7CB 1F5RI 1DTKA 4ISLB 3AUIA 1B0CA 2J6DA 1TFXC 2TGPI 4Y10I 4PTIA 2KNTA 3BTGI 1T8MB 1DTXA 3WNYA 2FI5I 4BD9B 3BTMI 2FI4I 1AALA 3OFWA 3BTEI 4ISOB 1P2NB 3BTTI 1P2QB 4U30W 1OA55 5JB7A 1F7ZI 1QLQA 1EJMB 1BRBI 5JB6A 2UUXA 1TAPA 3AUCA 1BTHP 1T8NB 5C67C 1P2JI 3D65I 2LFKA 1P2II 1T8OB 1P2MB 6PTIA 1FY8I 9PTIA 3L3TE 3AUEA 2RA3C 3M7QB 3FP8I 3OTJI 3UIRC 3LDJA 3UOUB 1BTIA 1T8LB 4Y0ZI 1KUNA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1CO7 I;  3AUH A;  1YKT B;  2ZVX A;  1KTH A;  4BNR I;  1YLC B;  2DDJ A;  4U32 X;  2ZJX A;  1TCP A;  1MTN D;  2JOT A;  2KCR A;  1OA6 5;  1P2O B;  1P2K I;  1LD6 A;  3BTF I;  4NTX B;  3T62 D;  1G6X A;  3TGJ I;  2PTC I;  1BZ5 A;  2DDI A;  1FAK I;  3TGK I;  1LD5 A;  3AUB A;  5JB5 A;  1CA0 D;  4TPI I;  1PIT A;  2UUY B;  1TOC R;  8PTI A;  2TPI I;  3TGI I;  3BTK I;  2M01 A;  3TPI I;  4NTY B;  2IJO I;  1BRC I;  1UUB A;  3BTD I;  3U1J E;  3BTH I;  4Y11 I;  1JV9 A;  3BTQ I;  3CI7 A;  1ADZ A;  1IRH A;  4WXV C;  3LDM A;  1JC6 A;  1ZR0 B;  1Y62 A;  1BF0 A;  4BQD A;  1KNT A;  1ZJD B;  1D0D A;  1DEM A;  2W8X A;  1FAN A;  3P95 E;  7PTI A;  2LFL A;  1YLD B;  1TPA I;  2CA7 A;  2FI3 I;  3GYM I;  3P92 E;  1EAW B;  1BPI A;  3AUD A;  5JB4 A;  1SHP A;  1BPT A;  1D0D B;  4WWY C;  2FTL I;  1AAP A;  1JV8 A;  3FP6 I;  4DTG K;  1YC0 I;  3BYB A;  1BIK A;  3FP7 J;  1BZX I;  4ISN B;  4Y0Y I;  4DG4 C;  1DEN A;  1CBW D;  5PTI A;  2FTM B;  2HEX A;  1KIG I;  3AUG A;  1TAW B;  2M99 A;  3BTW I;  1BHC A;  2ODY E;  3L33 E;  1NAG A;  1K6U A;  2R9P E;  4NTW B;  1BUN B;  2KAI I;  1UUA A;  3LDI A;  1T7C B;  1F5R I;  1DTK A;  4ISL B;  3AUI A;  1B0C A;  2J6D A;  1TFX C;  2TGP I;  4Y10 I;  4PTI A;  2KNT A;  3BTG I;  1T8M B;  1DTX A;  3WNY A;  2FI5 I;  4BD9 B;  3BTM I;  2FI4 I;  1AAL A;  3OFW A;  3BTE I;  4ISO B;  1P2N B;  3BTT I;  1P2Q B;  4U30 W;  1OA5 5;  5JB7 A;  1F7Z I;  1QLQ A;  1EJM B;  1BRB I;  5JB6 A;  2UUX A;  1TAP A;  3AUC A;  1BTH P;  1T8N B;  5C67 C;  1P2J I;  3D65 I;  2LFK A;  1P2I I;  1T8O B;  1P2M B;  6PTI A;  1FY8 I;  9PTI A;  3L3T E;  3AUE A;  2RA3 C;  3M7Q B;  3FP8 I;  3OTJ I;  3UIR C;  3LDJ A;  3UOU B;  1BTI A;  1T8L B;  4Y0Z I;  1KUN A; 
#chains in the Genus database with same CATH topology
 1CO7 I;  3AUH A;  1YKT B;  2ZVX A;  1KTH A;  4BNR I;  1YLC B;  2DDJ A;  4U32 X;  2ZJX A;  1TCP A;  1MTN D;  2JOT A;  2KCR A;  1OA6 5;  1P2O B;  1P2K I;  1LD6 A;  3BTF I;  4NTX B;  3T62 D;  1G6X A;  3TGJ I;  2PTC I;  1BZ5 A;  2DDI A;  1FAK I;  3TGK I;  1LD5 A;  3AUB A;  5JB5 A;  1CA0 D;  4TPI I;  1PIT A;  2UUY B;  1TOC R;  8PTI A;  2TPI I;  3TGI I;  3BTK I;  2M01 A;  3TPI I;  4NTY B;  2IJO I;  1BRC I;  1UUB A;  3BTD I;  3U1J E;  3BTH I;  4Y11 I;  1JV9 A;  3BTQ I;  3CI7 A;  1ADZ A;  1IRH A;  4WXV C;  3LDM A;  1JC6 A;  1ZR0 B;  1Y62 A;  1BF0 A;  4BQD A;  1KNT A;  1ZJD B;  1D0D A;  1DEM A;  2W8X A;  1FAN A;  3P95 E;  7PTI A;  2LFL A;  1YLD B;  1TPA I;  2CA7 A;  2FI3 I;  3GYM I;  3P92 E;  1EAW B;  1BPI A;  3AUD A;  5JB4 A;  1SHP A;  1BPT A;  1D0D B;  4WWY C;  2FTL I;  1AAP A;  1JV8 A;  3FP6 I;  4DTG K;  1YC0 I;  3BYB A;  1BIK A;  3FP7 J;  1BZX I;  4ISN B;  4Y0Y I;  4DG4 C;  1DEN A;  1CBW D;  5PTI A;  2FTM B;  2HEX A;  1KIG I;  3AUG A;  1TAW B;  2M99 A;  3BTW I;  1BHC A;  2ODY E;  3L33 E;  1NAG A;  1K6U A;  2R9P E;  4NTW B;  1BUN B;  2KAI I;  1UUA A;  3LDI A;  1T7C B;  1F5R I;  1DTK A;  4ISL B;  3AUI A;  1B0C A;  2J6D A;  1TFX C;  2TGP I;  4Y10 I;  4PTI A;  2KNT A;  3BTG I;  1T8M B;  1DTX A;  3WNY A;  2FI5 I;  4BD9 B;  3BTM I;  2FI4 I;  1AAL A;  3OFW A;  3BTE I;  4ISO B;  1P2N B;  3BTT I;  1P2Q B;  4U30 W;  1OA5 5;  5JB7 A;  1F7Z I;  1QLQ A;  1EJM B;  1BRB I;  5JB6 A;  2UUX A;  1TAP A;  3AUC A;  1BTH P;  1T8N B;  5C67 C;  1P2J I;  3D65 I;  2LFK A;  1P2I I;  1T8O B;  1P2M B;  6PTI A;  1FY8 I;  9PTI A;  3L3T E;  3AUE A;  2RA3 C;  3M7Q B;  3FP8 I;  3OTJ I;  3UIR C;  3LDJ A;  3UOU B;  1BTI A;  1T8L B;  4Y0Z I;  1KUN A; 
#chains in the Genus database with same CATH homology
 1CO7 I;  3AUH A;  1YKT B;  2ZVX A;  1KTH A;  4BNR I;  1YLC B;  2DDJ A;  4U32 X;  2ZJX A;  1TCP A;  1MTN D;  2JOT A;  2KCR A;  1OA6 5;  1P2O B;  1P2K I;  1LD6 A;  3BTF I;  4NTX B;  3T62 D;  1G6X A;  3TGJ I;  2PTC I;  1BZ5 A;  2DDI A;  1FAK I;  3TGK I;  1LD5 A;  3AUB A;  5JB5 A;  1CA0 D;  4TPI I;  1PIT A;  2UUY B;  1TOC R;  8PTI A;  2TPI I;  3TGI I;  3BTK I;  2M01 A;  3TPI I;  4NTY B;  2IJO I;  1BRC I;  1UUB A;  3BTD I;  3U1J E;  3BTH I;  4Y11 I;  1JV9 A;  3BTQ I;  3CI7 A;  1ADZ A;  1IRH A;  4WXV C;  3LDM A;  1JC6 A;  1ZR0 B;  1Y62 A;  1BF0 A;  4BQD A;  1KNT A;  1ZJD B;  1D0D A;  1DEM A;  2W8X A;  1FAN A;  3P95 E;  7PTI A;  2LFL A;  1YLD B;  1TPA I;  2CA7 A;  2FI3 I;  3GYM I;  3P92 E;  1EAW B;  1BPI A;  3AUD A;  5JB4 A;  1SHP A;  1BPT A;  1D0D B;  4WWY C;  2FTL I;  1AAP A;  1JV8 A;  3FP6 I;  4DTG K;  1YC0 I;  3BYB A;  1BIK A;  3FP7 J;  1BZX I;  4ISN B;  4Y0Y I;  4DG4 C;  1DEN A;  1CBW D;  5PTI A;  2FTM B;  2HEX A;  1KIG I;  3AUG A;  1TAW B;  2M99 A;  3BTW I;  1BHC A;  2ODY E;  3L33 E;  1NAG A;  1K6U A;  2R9P E;  4NTW B;  1BUN B;  2KAI I;  1UUA A;  3LDI A;  1T7C B;  1F5R I;  1DTK A;  4ISL B;  3AUI A;  1B0C A;  2J6D A;  1TFX C;  2TGP I;  4Y10 I;  4PTI A;  2KNT A;  3BTG I;  1T8M B;  1DTX A;  3WNY A;  2FI5 I;  4BD9 B;  3BTM I;  2FI4 I;  1AAL A;  3OFW A;  3BTE I;  4ISO B;  1P2N B;  3BTT I;  1P2Q B;  4U30 W;  1OA5 5;  5JB7 A;  1F7Z I;  1QLQ A;  1EJM B;  1BRB I;  5JB6 A;  2UUX A;  1TAP A;  3AUC A;  1BTH P;  1T8N B;  5C67 C;  1P2J I;  3D65 I;  2LFK A;  1P2I I;  1T8O B;  1P2M B;  6PTI A;  1FY8 I;  9PTI A;  3L3T E;  3AUE A;  2RA3 C;  3M7Q B;  3FP8 I;  3OTJ I;  3UIR C;  3LDJ A;  3UOU B;  1BTI A;  1T8L B;  4Y0Z I;  1KUN A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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