1KP0A

The crystal structure analysis of creatine amidinohydrolase from actinobacillus
Total Genus 138
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
138
sequence length
402
structure length
402
Chain Sequence
b'AAMIXTXKYHNGXKKYTPFSXAEMTRRXXRLRAWMAKSXIDAVLFTSYHNINYYSGWLYCYFGRKYAXVIXXVKAVTISKGIDGGMPWRRSFGXNIVYTDWKRDNFYSAVKKLVKGAKXIGIEHDHVTLXHRRXLXKALPGTEFVDVGXPVMWXRVIKSSEEXXLIRXGARISDIGGAATAAAISAGVPEYEVAIATTXAMVRXIARXFPYVELMDTWIWFQSGINTDGAHNPVTXRVVXRGDILSLNCFPMIFGYYTALERTLFLXXVXDASLXIWXKNTAVHRRGLXLIKPGARCKDIASELNXMYRXWDLLRYRTFGYGHSFGVLXHYYGREAGVELREDIXTVLEPGMVVSMEPMVMXPEGEPGAGGYREHDILVIKENXTENITGFPFGPEHNIIKA'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords CREATINE AMIDINOHYDROLASE
publication title Structure of creatine amidinohydrolase from Actinobacillus.
pubmed doi rcsb
molecule tags Hydrolase
total genus 138
structure length 402
sequence length 402
chains with identical sequence B
ec nomenclature ec 3.5.3.3: Creatinase.
pdb deposition date 2001-12-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
A PF01321 Creatinase_N Creatinase/Prolidase N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 1kp0A01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 1kp0A02
4ZNGA 1WL6A 5CDLA 2GU7A 2GU6A 2NQ7A 4ZWPA 3IU7A 4U76A 2EA4A 1W2MA 4RZYA 3IU9A 1M35A 3BIPA 4R60A 2OKNA 2GA2A 5CLSA 3L24A 4IKUA 2B3KA 4EGEA 1C22A 1WBQA 5CIKA 5JHUA 1XGNA 1BOAA 2GG5A 1A16A 3I7MA 2IW2A 3S6BA 2V3XA 4ZWOA 1QXZA 2BHBA 1B59A 4U6JA 2HOWA 4RGZ1 5CNXA 2DFIA 4A6WA 4S2TP 3BIQA 1WY2A 4U73A 2V3ZA 4IU6A 5JFRA 4U6CA 4PV4A 2Q8KA 1KP0A 2GU4A 2GG8A 2BN7A 2P9AA 2EVMA 2GG0A 2ZSGA 1WN1A 4FLKA 3PN9A 1R5GA 1CHMA 1YW9A 4MATA 5CDVA 1C23A 2EVOA 3QOCA 2GTXA 3L7GA 2BHCA 4U6ZA 3RVAA 4S00A 4FLJA 5D6EA 3D27A 1PV9A 2Q92A 4IPAA 3CTZA 4FKCA 4S2RP 1Y1NA 2OAZA 3IL0A 2Q96A 3FMRA 4IKRA 2P98A 2NQ6A 2EVCA 2BWYA 2BWTA 4KM3A 2V3YA 4FO7A 1WL9A 3BITA 1KQ0A 2GG9A 3IU8A 1B6AA 4IKSA 2BWVA 4ZWUA 3OOOA 4U70A 1WLRA 4QR8A 3TB5A 5D6FA 4IF7A 3MR1A 3MATA 4IDYA 4OOKA 2BB7A 2BHAA 2ADUA 2B3LA 4IECA 4U6EA 2Q94A 1N51A 1XGOA 1W7VA 3FM3A 4U71A 4Z7MA 3PKBA 2GG2A 3PKCA 2BWSA 1C21A 3RORA 5FCFA 2BH3A 4HXXA 3CB5A 1XGMA 2BWWA 1QXWA 5JI6A 4FLLA 2P99A 4PNCA 5E2CA 2G6PA 3PKEA 5CDEA 3TAVA 4FO8A 1QZYA 2Q93A 1R58A 3PEBA 4S01A 2GZ5A 1QXYA 4JUQA 2GU5A 2V6CA 1WKMA 1XGSA 4A6VA 4U6WA 4B28A 3MX6A 1YVMA 2GG3A 5E5BA 1YJ3A 1KQ9A 3O5VA 1C27A 1O0XA 1BN5A 4U75A 3Q6DA 4FLIA 1R5HA 2GGCA 1MATA 1YW7A 5CE6A 3FMQA 1YW8A 1XNZA 2BWUA 3IG4A 3OVKA 2EA2A 2GG7A 4U69A 3PKAA 2BHDA 2GGBA 4U1BA 2B3HA 2BWXA 1C24A 1JAWA 3PKDA 4RZZA 4FUKA 2MATA 5FCHA 4IKTA 2Q95A 3CB6A
chains in the Genus database with same CATH superfamily
4ZNGA 1WL6A 5CDLA 2GU7A 2GU6A 2NQ7A 4ZWPA 3IU7A 4U76A 2EA4A 1W2MA 4RZYA 3IU9A 1M35A 3BIPA 4R60A 2OKNA 2GA2A 5CLSA 3L24A 4IKUA 2B3KA 4EGEA 1C22A 1WBQA 5CIKA 5JHUA 1XGNA 1BOAA 2GG5A 1A16A 3I7MA 2IW2A 3S6BA 2V3XA 4ZWOA 1QXZA 2BHBA 1B59A 4U6JA 2HOWA 4RGZ1 5CNXA 2DFIA 4A6WA 4S2TP 3BIQA 1WY2A 4U73A 2V3ZA 4IU6A 5JFRA 4U6CA 4PV4A 2Q8KA 1KP0A 2GU4A 2GG8A 2BN7A 2P9AA 2EVMA 2GG0A 2ZSGA 1WN1A 4FLKA 3PN9A 1R5GA 1CHMA 1YW9A 4MATA 5CDVA 1C23A 2EVOA 3QOCA 2GTXA 3L7GA 2BHCA 4U6ZA 3RVAA 4S00A 4FLJA 5D6EA 3D27A 1PV9A 2Q92A 4IPAA 3CTZA 4FKCA 4S2RP 1Y1NA 2OAZA 3IL0A 2Q96A 3FMRA 4IKRA 2P98A 2NQ6A 2EVCA 2BWYA 2BWTA 4KM3A 2V3YA 4FO7A 1WL9A 3BITA 1KQ0A 2GG9A 3IU8A 1B6AA 4IKSA 2BWVA 4ZWUA 3OOOA 4U70A 1WLRA 4QR8A 3TB5A 5D6FA 4IF7A 3MR1A 3MATA 4IDYA 4OOKA 2BB7A 2BHAA 2ADUA 2B3LA 4IECA 4U6EA 2Q94A 1N51A 1XGOA 1W7VA 3FM3A 4U71A 4Z7MA 3PKBA 2GG2A 3PKCA 2BWSA 1C21A 3RORA 5FCFA 2BH3A 4HXXA 3CB5A 1XGMA 2BWWA 1QXWA 5JI6A 4FLLA 2P99A 4PNCA 5E2CA 2G6PA 3PKEA 5CDEA 3TAVA 4FO8A 1QZYA 2Q93A 1R58A 3PEBA 4S01A 2GZ5A 1QXYA 4JUQA 2GU5A 2V6CA 1WKMA 1XGSA 4A6VA 4U6WA 4B28A 3MX6A 1YVMA 2GG3A 5E5BA 1YJ3A 1KQ9A 3O5VA 1C27A 1O0XA 1BN5A 4U75A 3Q6DA 4FLIA 1R5HA 2GGCA 1MATA 1YW7A 5CE6A 3FMQA 1YW8A 1XNZA 2BWUA 3IG4A 3OVKA 2EA2A 2GG7A 4U69A 3PKAA 2BHDA 2GGBA 4U1BA 2B3HA 2BWXA 1C24A 1JAWA 3PKDA 4RZZA 4FUKA 2MATA 5FCHA 4IKTA 2Q95A 3CB6A
chains in the Genus database with same CATH topology
4ZNGA 1WL6A 5CDLA 2GU7A 2GU6A 2NQ7A 4ZWPA 3IU7A 4U76A 2EA4A 1W2MA 4RZYA 3IU9A 1M35A 3BIPA 4R60A 2OKNA 2GA2A 5CLSA 3L24A 4IKUA 2B3KA 4EGEA 1C22A 1WBQA 5CIKA 5JHUA 1XGNA 1BOAA 2GG5A 1A16A 3I7MA 2IW2A 3S6BA 2V3XA 4ZWOA 1QXZA 2BHBA 1B59A 4U6JA 2HOWA 4RGZ1 5CNXA 2DFIA 4A6WA 4S2TP 3BIQA 1WY2A 4U73A 2V3ZA 4IU6A 5JFRA 4U6CA 4PV4A 2Q8KA 1KP0A 2GU4A 2GG8A 2BN7A 2P9AA 2EVMA 2GG0A 2ZSGA 1WN1A 4FLKA 3PN9A 1R5GA 1CHMA 1YW9A 4MATA 5CDVA 1C23A 2EVOA 3QOCA 2GTXA 3L7GA 2BHCA 4U6ZA 3RVAA 4S00A 4FLJA 5D6EA 3D27A 1PV9A 2Q92A 4IPAA 3CTZA 4FKCA 4S2RP 1Y1NA 2OAZA 3IL0A 2Q96A 3FMRA 4IKRA 2P98A 2NQ6A 2EVCA 2BWYA 2BWTA 4KM3A 2V3YA 4FO7A 1WL9A 3BITA 1KQ0A 2GG9A 3IU8A 1B6AA 4IKSA 2BWVA 4ZWUA 3OOOA 4U70A 1WLRA 4QR8A 3TB5A 5D6FA 4IF7A 3MR1A 3MATA 4IDYA 4OOKA 2BB7A 2BHAA 2ADUA 2B3LA 4IECA 4U6EA 2Q94A 1N51A 1XGOA 1W7VA 3FM3A 4U71A 4Z7MA 3PKBA 2GG2A 3PKCA 2BWSA 1C21A 3RORA 5FCFA 2BH3A 4HXXA 3CB5A 1XGMA 2BWWA 1QXWA 5JI6A 4FLLA 2P99A 4PNCA 5E2CA 2G6PA 3PKEA 5CDEA 3TAVA 4FO8A 1QZYA 2Q93A 1R58A 3PEBA 4S01A 2GZ5A 1QXYA 4JUQA 2GU5A 2V6CA 1WKMA 1XGSA 4A6VA 4U6WA 4B28A 3MX6A 1YVMA 2GG3A 5E5BA 1YJ3A 1KQ9A 3O5VA 1C27A 1O0XA 1BN5A 4U75A 3Q6DA 4FLIA 1R5HA 2GGCA 1MATA 1YW7A 5CE6A 3FMQA 1YW8A 1XNZA 2BWUA 3IG4A 3OVKA 2EA2A 2GG7A 4U69A 3PKAA 2BHDA 2GGBA 4U1BA 2B3HA 2BWXA 1C24A 1JAWA 3PKDA 4RZZA 4FUKA 2MATA 5FCHA 4IKTA 2Q95A 3CB6A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4ZNG A;  1WL6 A;  5CDL A;  2GU7 A;  2GU6 A;  2NQ7 A;  4ZWP A;  3IU7 A;  4U76 A;  2EA4 A;  1W2M A;  4RZY A;  3IU9 A;  1M35 A;  3BIP A;  4R60 A;  2OKN A;  2GA2 A;  5CLS A;  3L24 A;  4IKU A;  2B3K A;  4EGE A;  1C22 A;  1WBQ A;  5CIK A;  5JHU A;  1XGN A;  1BOA A;  2GG5 A;  1A16 A;  3I7M A;  2IW2 A;  3S6B A;  2V3X A;  4ZWO A;  1QXZ A;  2BHB A;  1B59 A;  4U6J A;  2HOW A;  4RGZ 1;  5CNX A;  2DFI A;  4A6W A;  4S2T P;  3BIQ A;  1WY2 A;  4U73 A;  2V3Z A;  4IU6 A;  5JFR A;  4U6C A;  4PV4 A;  2Q8K A;  1KP0 A;  2GU4 A;  2GG8 A;  2BN7 A;  2P9A A;  2EVM A;  2GG0 A;  2ZSG A;  1WN1 A;  4FLK A;  3PN9 A;  1R5G A;  1CHM A;  1YW9 A;  4MAT A;  5CDV A;  1C23 A;  2EVO A;  3QOC A;  2GTX A;  3L7G A;  2BHC A;  4U6Z A;  3RVA A;  4S00 A;  4FLJ A;  5D6E A;  3D27 A;  1PV9 A;  2Q92 A;  4IPA A;  3CTZ A;  4FKC A;  4S2R P;  1Y1N A;  2OAZ A;  3IL0 A;  2Q96 A;  3FMR A;  4IKR A;  2P98 A;  2NQ6 A;  2EVC A;  2BWY A;  2BWT A;  4KM3 A;  2V3Y A;  4FO7 A;  1WL9 A;  3BIT A;  1KQ0 A;  2GG9 A;  3IU8 A;  1B6A A;  4IKS A;  2BWV A;  4ZWU A;  3OOO A;  4U70 A;  1WLR A;  4QR8 A;  3TB5 A;  5D6F A;  4IF7 A;  3MR1 A;  3MAT A;  4IDY A;  4OOK A;  2BB7 A;  2BHA A;  2ADU A;  2B3L A;  4IEC A;  4U6E A;  2Q94 A;  1N51 A;  1XGO A;  1W7V A;  3FM3 A;  4U71 A;  4Z7M A;  3PKB A;  2GG2 A;  3PKC A;  2BWS A;  1C21 A;  3ROR A;  5FCF A;  2BH3 A;  4HXX A;  3CB5 A;  1XGM A;  2BWW A;  1QXW A;  5JI6 A;  4FLL A;  2P99 A;  4PNC A;  5E2C A;  2G6P A;  3PKE A;  5CDE A;  3TAV A;  4FO8 A;  1QZY A;  2Q93 A;  1R58 A;  3PEB A;  4S01 A;  2GZ5 A;  1QXY A;  4JUQ A;  2GU5 A;  2V6C A;  1WKM A;  1XGS A;  4A6V A;  4U6W A;  4B28 A;  3MX6 A;  1YVM A;  2GG3 A;  5E5B A;  1YJ3 A;  1KQ9 A;  3O5V A;  1C27 A;  1O0X A;  1BN5 A;  4U75 A;  3Q6D A;  4FLI A;  1R5H A;  2GGC A;  1MAT A;  1YW7 A;  5CE6 A;  3FMQ A;  1YW8 A;  1XNZ A;  2BWU A;  3IG4 A;  3OVK A;  2EA2 A;  2GG7 A;  4U69 A;  3PKA A;  2BHD A;  2GGB A;  4U1B A;  2B3H A;  2BWX A;  1C24 A;  1JAW A;  3PKD A;  4RZZ A;  4FUK A;  2MAT A;  5FCH A;  4IKT A;  2Q95 A;  3CB6 A; 
#chains in the Genus database with same CATH topology
 4ZNG A;  1WL6 A;  5CDL A;  2GU7 A;  2GU6 A;  2NQ7 A;  4ZWP A;  3IU7 A;  4U76 A;  2EA4 A;  1W2M A;  4RZY A;  3IU9 A;  1M35 A;  3BIP A;  4R60 A;  2OKN A;  2GA2 A;  5CLS A;  3L24 A;  4IKU A;  2B3K A;  4EGE A;  1C22 A;  1WBQ A;  5CIK A;  5JHU A;  1XGN A;  1BOA A;  2GG5 A;  1A16 A;  3I7M A;  2IW2 A;  3S6B A;  2V3X A;  4ZWO A;  1QXZ A;  2BHB A;  1B59 A;  4U6J A;  2HOW A;  4RGZ 1;  5CNX A;  2DFI A;  4A6W A;  4S2T P;  3BIQ A;  1WY2 A;  4U73 A;  2V3Z A;  4IU6 A;  5JFR A;  4U6C A;  4PV4 A;  2Q8K A;  1KP0 A;  2GU4 A;  2GG8 A;  2BN7 A;  2P9A A;  2EVM A;  2GG0 A;  2ZSG A;  1WN1 A;  4FLK A;  3PN9 A;  1R5G A;  1CHM A;  1YW9 A;  4MAT A;  5CDV A;  1C23 A;  2EVO A;  3QOC A;  2GTX A;  3L7G A;  2BHC A;  4U6Z A;  3RVA A;  4S00 A;  4FLJ A;  5D6E A;  3D27 A;  1PV9 A;  2Q92 A;  4IPA A;  3CTZ A;  4FKC A;  4S2R P;  1Y1N A;  2OAZ A;  3IL0 A;  2Q96 A;  3FMR A;  4IKR A;  2P98 A;  2NQ6 A;  2EVC A;  2BWY A;  2BWT A;  4KM3 A;  2V3Y A;  4FO7 A;  1WL9 A;  3BIT A;  1KQ0 A;  2GG9 A;  3IU8 A;  1B6A A;  4IKS A;  2BWV A;  4ZWU A;  3OOO A;  4U70 A;  1WLR A;  4QR8 A;  3TB5 A;  5D6F A;  4IF7 A;  3MR1 A;  3MAT A;  4IDY A;  4OOK A;  2BB7 A;  2BHA A;  2ADU A;  2B3L A;  4IEC A;  4U6E A;  2Q94 A;  1N51 A;  1XGO A;  1W7V A;  3FM3 A;  4U71 A;  4Z7M A;  3PKB A;  2GG2 A;  3PKC A;  2BWS A;  1C21 A;  3ROR A;  5FCF A;  2BH3 A;  4HXX A;  3CB5 A;  1XGM A;  2BWW A;  1QXW A;  5JI6 A;  4FLL A;  2P99 A;  4PNC A;  5E2C A;  2G6P A;  3PKE A;  5CDE A;  3TAV A;  4FO8 A;  1QZY A;  2Q93 A;  1R58 A;  3PEB A;  4S01 A;  2GZ5 A;  1QXY A;  4JUQ A;  2GU5 A;  2V6C A;  1WKM A;  1XGS A;  4A6V A;  4U6W A;  4B28 A;  3MX6 A;  1YVM A;  2GG3 A;  5E5B A;  1YJ3 A;  1KQ9 A;  3O5V A;  1C27 A;  1O0X A;  1BN5 A;  4U75 A;  3Q6D A;  4FLI A;  1R5H A;  2GGC A;  1MAT A;  1YW7 A;  5CE6 A;  3FMQ A;  1YW8 A;  1XNZ A;  2BWU A;  3IG4 A;  3OVK A;  2EA2 A;  2GG7 A;  4U69 A;  3PKA A;  2BHD A;  2GGB A;  4U1B A;  2B3H A;  2BWX A;  1C24 A;  1JAW A;  3PKD A;  4RZZ A;  4FUK A;  2MAT A;  5FCH A;  4IKT A;  2Q95 A;  3CB6 A; 
#chains in the Genus database with same CATH homology
 4ZNG A;  1WL6 A;  5CDL A;  2GU7 A;  2GU6 A;  2NQ7 A;  4ZWP A;  3IU7 A;  4U76 A;  2EA4 A;  1W2M A;  4RZY A;  3IU9 A;  1M35 A;  3BIP A;  4R60 A;  2OKN A;  2GA2 A;  5CLS A;  3L24 A;  4IKU A;  2B3K A;  4EGE A;  1C22 A;  1WBQ A;  5CIK A;  5JHU A;  1XGN A;  1BOA A;  2GG5 A;  1A16 A;  3I7M A;  2IW2 A;  3S6B A;  2V3X A;  4ZWO A;  1QXZ A;  2BHB A;  1B59 A;  4U6J A;  2HOW A;  4RGZ 1;  5CNX A;  2DFI A;  4A6W A;  4S2T P;  3BIQ A;  1WY2 A;  4U73 A;  2V3Z A;  4IU6 A;  5JFR A;  4U6C A;  4PV4 A;  2Q8K A;  1KP0 A;  2GU4 A;  2GG8 A;  2BN7 A;  2P9A A;  2EVM A;  2GG0 A;  2ZSG A;  1WN1 A;  4FLK A;  3PN9 A;  1R5G A;  1CHM A;  1YW9 A;  4MAT A;  5CDV A;  1C23 A;  2EVO A;  3QOC A;  2GTX A;  3L7G A;  2BHC A;  4U6Z A;  3RVA A;  4S00 A;  4FLJ A;  5D6E A;  3D27 A;  1PV9 A;  2Q92 A;  4IPA A;  3CTZ A;  4FKC A;  4S2R P;  1Y1N A;  2OAZ A;  3IL0 A;  2Q96 A;  3FMR A;  4IKR A;  2P98 A;  2NQ6 A;  2EVC A;  2BWY A;  2BWT A;  4KM3 A;  2V3Y A;  4FO7 A;  1WL9 A;  3BIT A;  1KQ0 A;  2GG9 A;  3IU8 A;  1B6A A;  4IKS A;  2BWV A;  4ZWU A;  3OOO A;  4U70 A;  1WLR A;  4QR8 A;  3TB5 A;  5D6F A;  4IF7 A;  3MR1 A;  3MAT A;  4IDY A;  4OOK A;  2BB7 A;  2BHA A;  2ADU A;  2B3L A;  4IEC A;  4U6E A;  2Q94 A;  1N51 A;  1XGO A;  1W7V A;  3FM3 A;  4U71 A;  4Z7M A;  3PKB A;  2GG2 A;  3PKC A;  2BWS A;  1C21 A;  3ROR A;  5FCF A;  2BH3 A;  4HXX A;  3CB5 A;  1XGM A;  2BWW A;  1QXW A;  5JI6 A;  4FLL A;  2P99 A;  4PNC A;  5E2C A;  2G6P A;  3PKE A;  5CDE A;  3TAV A;  4FO8 A;  1QZY A;  2Q93 A;  1R58 A;  3PEB A;  4S01 A;  2GZ5 A;  1QXY A;  4JUQ A;  2GU5 A;  2V6C A;  1WKM A;  1XGS A;  4A6V A;  4U6W A;  4B28 A;  3MX6 A;  1YVM A;  2GG3 A;  5E5B A;  1YJ3 A;  1KQ9 A;  3O5V A;  1C27 A;  1O0X A;  1BN5 A;  4U75 A;  3Q6D A;  4FLI A;  1R5H A;  2GGC A;  1MAT A;  1YW7 A;  5CE6 A;  3FMQ A;  1YW8 A;  1XNZ A;  2BWU A;  3IG4 A;  3OVK A;  2EA2 A;  2GG7 A;  4U69 A;  3PKA A;  2BHD A;  2GGB A;  4U1B A;  2B3H A;  2BWX A;  1C24 A;  1JAW A;  3PKD A;  4RZZ A;  4FUK A;  2MAT A;  5FCH A;  4IKT A;  2Q95 A;  3CB6 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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