1KPFA

Pkci-substrate analog
Total Genus 24
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
24
sequence length
111
structure length
111
Chain Sequence
DTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Protein kinase inhibitor
molecule keywords PROTEIN KINASE C INTERACTING PROTEIN
publication title Structure-based analysis of catalysis and substrate definition in the HIT protein family.
pubmed doi rcsb
source organism Homo sapiens
total genus 24
structure length 111
sequence length 111
ec nomenclature
pdb deposition date 1997-09-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01230 HIT HIT domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.428.10 Alpha Beta 2-Layer Sandwich HIT family, subunit A HIT-like 1kpfA00
5ED3A 5ED6A 4EQHA 2OIKA 5I2EA 6RHNA 1EMSA 3N1SA 4INCA 3O0MA 1GUQA 3RHNA 4QEBA 4NDGA 1FITA 3P0TA 2FITA 2FHIA 3OMFA 4XBAA 5IPEA 3QGZA 3WO5A 3O1XA 2Q4HA 4NJZA 4ZKLA 3FITA 3SP4A 1XMMA 1Y23A 6FITA 4EQGA 3KSVA 5IPBA 2EO4A 1XMLA 4QDVA 3LB5A 2H39A 3L7XA 1AV5A 3SZQA 3NRDA 5IPDA 5FITA 3BL9A 1KPBA 4NDFA 1ST4A 4QDEA 1KPFA 5I2FA 1VLRA 3OHEA 1ST0A 3BLAA 1Z84A 3SPLA 3R6FA 1KPAA 3N1TA 3BL7A 3O1CA 3OJ7A 5BV3A 4NJXA 3TW2A 4NK0A 4EQEA 4YKLB 3I4SA 3O1ZA 3SPDA 1ZWJA 1HXPA 5IPCA 1KPCA 3ANOA 3OXKA 4INIA 4EGUA 5EMTA 4NDHA 1GUPA 1HXQA 3I24A 5IN3A 1KPEA 5CS2A 4ZGLA 1FHIA 4RHNA 3IMIA 2Q4LA 4NJYA 5RHNA 4NDIA 4ZKVA 1RZYA 4FITA
chains in the Genus database with same CATH superfamily
5ED3A 4I5TA 5ED6A 4EQHA 2R7JA 2OIKA 5I2EA 2R8FA 6RHNA 1EMSA 3N1SA 1L9VA 4INCA 3O0MA 1GUQA 3RHNA 4QEBA 2R7PA 4NDGA 1FITA 3P0TA 2FITA 2FHIA 3OMFA 4XBAA 5IPEA 3QGZA 2LJWA 3WO5A 3O1XA 2Q4HA 4NJZA 4ZKLA 3FITA 3SP4A 1XMMA 1Y23A 6FITA 4EQGA 3KSVA 5IPBA 2EO4A 1XMLA 4QDVA 3LB5A 2H39A 3L7XA 1AV5A 3SZQA 4I5WA 3NRDA 5IPDA 5FITA 2POFA 3BL9A 1KPBA 4NDFA 1ST4A 4QDEA 1KPFA 5I2FA 1VLRA 4G0AA 3OHEA 1ST0A 3BLAA 1Z84A 3SPLA 3R6FA 1KPAA 3N1TA 3BL7A 3O1CA 3OJ7A 5BV3A 4NJXA 3TW2A 4NK0A 4EQEA 4YKLB 3I4SA 3O1ZA 3SPDA 1ZWJA 1HXPA 5IPCA 4G0JA 1KPCA 3ANOA 3OXKA 4I5VA 4INIA 4EGUA 5EMTA 4NDHA 2GU0A 1GUPA 1HXQA 3I24A 5IN3A 1KPEA 5CS2A 4ZGLA 1FHIA 4RHNA 3IMIA 2Q4LA 4NJYA 5RHNA 4NDIA 4ZKVA 1RZYA 4FITA 2R7CA
chains in the Genus database with same CATH topology
5ED3A 5ED6A 4EQHA 2OIKA 5I2EA 6RHNA 1EMSA 3N1SA 4INCA 3O0MA 1GUQA 3RHNA 4QEBA 4NDGA 1FITA 3P0TA 2FITA 2FHIA 3OMFA 4XBAA 5IPEA 3QGZA 3WO5A 3O1XA 2Q4HA 4NJZA 4ZKLA 3FITA 3SP4A 1XMMA 1Y23A 6FITA 4EQGA 3KSVA 5IPBA 2EO4A 1XMLA 4QDVA 3LB5A 2H39A 3L7XA 1AV5A 3SZQA 3NRDA 5IPDA 5FITA 3BL9A 1KPBA 4NDFA 1ST4A 4QDEA 1KPFA 5I2FA 1VLRA 3OHEA 1ST0A 3BLAA 1Z84A 3SPLA 3R6FA 1KPAA 3N1TA 3BL7A 3O1CA 3OJ7A 5BV3A 4NJXA 3TW2A 4NK0A 4EQEA 4YKLB 3I4SA 3O1ZA 3SPDA 1ZWJA 1HXPA 5IPCA 1KPCA 3ANOA 3OXKA 4INIA 4EGUA 5EMTA 4NDHA 1GUPA 1HXQA 3I24A 5IN3A 1KPEA 5CS2A 4ZGLA 1FHIA 4RHNA 3IMIA 2Q4LA 4NJYA 5RHNA 4NDIA 4ZKVA 1RZYA 4FITA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5ED3 A;  5ED6 A;  4EQH A;  2OIK A;  5I2E A;  6RHN A;  1EMS A;  3N1S A;  4INC A;  3O0M A;  1GUQ A;  3RHN A;  4QEB A;  4NDG A;  1FIT A;  3P0T A;  2FIT A;  2FHI A;  3OMF A;  4XBA A;  5IPE A;  3QGZ A;  3WO5 A;  3O1X A;  2Q4H A;  4NJZ A;  4ZKL A;  3FIT A;  3SP4 A;  1XMM A;  1Y23 A;  6FIT A;  4EQG A;  3KSV A;  5IPB A;  2EO4 A;  1XML A;  4QDV A;  3LB5 A;  2H39 A;  3L7X A;  1AV5 A;  3SZQ A;  3NRD A;  5IPD A;  5FIT A;  3BL9 A;  1KPB A;  4NDF A;  1ST4 A;  4QDE A;  1KPF A;  5I2F A;  1VLR A;  3OHE A;  1ST0 A;  3BLA A;  1Z84 A;  3SPL A;  3R6F A;  1KPA A;  3N1T A;  3BL7 A;  3O1C A;  3OJ7 A;  5BV3 A;  4NJX A;  3TW2 A;  4NK0 A;  4EQE A;  4YKL B;  3I4S A;  3O1Z A;  3SPD A;  1ZWJ A;  1HXP A;  5IPC A;  1KPC A;  3ANO A;  3OXK A;  4INI A;  4EGU A;  5EMT A;  4NDH A;  1GUP A;  1HXQ A;  3I24 A;  5IN3 A;  1KPE A;  5CS2 A;  4ZGL A;  1FHI A;  4RHN A;  3IMI A;  2Q4L A;  4NJY A;  5RHN A;  4NDI A;  4ZKV A;  1RZY A;  4FIT A; 
#chains in the Genus database with same CATH topology
 5ED3 A;  4I5T A;  5ED6 A;  4EQH A;  2R7J A;  2OIK A;  5I2E A;  2R8F A;  6RHN A;  1EMS A;  3N1S A;  1L9V A;  4INC A;  3O0M A;  1GUQ A;  3RHN A;  4QEB A;  2R7P A;  4NDG A;  1FIT A;  3P0T A;  2FIT A;  2FHI A;  3OMF A;  4XBA A;  5IPE A;  3QGZ A;  2LJW A;  3WO5 A;  3O1X A;  2Q4H A;  4NJZ A;  4ZKL A;  3FIT A;  3SP4 A;  1XMM A;  1Y23 A;  6FIT A;  4EQG A;  3KSV A;  5IPB A;  2EO4 A;  1XML A;  4QDV A;  3LB5 A;  2H39 A;  3L7X A;  1AV5 A;  3SZQ A;  4I5W A;  3NRD A;  5IPD A;  5FIT A;  2POF A;  3BL9 A;  1KPB A;  4NDF A;  1ST4 A;  4QDE A;  1KPF A;  5I2F A;  1VLR A;  4G0A A;  3OHE A;  1ST0 A;  3BLA A;  1Z84 A;  3SPL A;  3R6F A;  1KPA A;  3N1T A;  3BL7 A;  3O1C A;  3OJ7 A;  5BV3 A;  4NJX A;  3TW2 A;  4NK0 A;  4EQE A;  4YKL B;  3I4S A;  3O1Z A;  3SPD A;  1ZWJ A;  1HXP A;  5IPC A;  4G0J A;  1KPC A;  3ANO A;  3OXK A;  4I5V A;  4INI A;  4EGU A;  5EMT A;  4NDH A;  2GU0 A;  1GUP A;  1HXQ A;  3I24 A;  5IN3 A;  1KPE A;  5CS2 A;  4ZGL A;  1FHI A;  4RHN A;  3IMI A;  2Q4L A;  4NJY A;  5RHN A;  4NDI A;  4ZKV A;  1RZY A;  4FIT A;  2R7C A; 
#chains in the Genus database with same CATH homology
 5ED3 A;  5ED6 A;  4EQH A;  2OIK A;  5I2E A;  6RHN A;  1EMS A;  3N1S A;  4INC A;  3O0M A;  1GUQ A;  3RHN A;  4QEB A;  4NDG A;  1FIT A;  3P0T A;  2FIT A;  2FHI A;  3OMF A;  4XBA A;  5IPE A;  3QGZ A;  3WO5 A;  3O1X A;  2Q4H A;  4NJZ A;  4ZKL A;  3FIT A;  3SP4 A;  1XMM A;  1Y23 A;  6FIT A;  4EQG A;  3KSV A;  5IPB A;  2EO4 A;  1XML A;  4QDV A;  3LB5 A;  2H39 A;  3L7X A;  1AV5 A;  3SZQ A;  3NRD A;  5IPD A;  5FIT A;  3BL9 A;  1KPB A;  4NDF A;  1ST4 A;  4QDE A;  1KPF A;  5I2F A;  1VLR A;  3OHE A;  1ST0 A;  3BLA A;  1Z84 A;  3SPL A;  3R6F A;  1KPA A;  3N1T A;  3BL7 A;  3O1C A;  3OJ7 A;  5BV3 A;  4NJX A;  3TW2 A;  4NK0 A;  4EQE A;  4YKL B;  3I4S A;  3O1Z A;  3SPD A;  1ZWJ A;  1HXP A;  5IPC A;  1KPC A;  3ANO A;  3OXK A;  4INI A;  4EGU A;  5EMT A;  4NDH A;  1GUP A;  1HXQ A;  3I24 A;  5IN3 A;  1KPE A;  5CS2 A;  4ZGL A;  1FHI A;  4RHN A;  3IMI A;  2Q4L A;  4NJY A;  5RHN A;  4NDI A;  4ZKV A;  1RZY A;  4FIT A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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