1LXTA

Structure of phosphotransferase phosphoglucomutase from rabbit
Total Genus 181
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
181
sequence length
561
structure length
561
Chain Sequence
VKIVTVKTKAYPDQKPGTSGLRKRVKVFQSSTNYAENFIQSIISTVEPAQRQEATLVVGGDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKSGEHDFGAAFDGDGDRNMILGKHGFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQSVEDILKDHWHKFGRNFFTRYDYEEVEAEGATKMMKDLEALMFDRSFVGKQFSANDKVYTVEKADNFEYHDPVDGSVSKNQGLRLIFADGSRIIFRLSGTGSAGATIRLYIDSYEKDNAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords PHOSPHOGLUCOMUTASE (DEPHOSPHO FORM)
publication title Structure of rabbit muscle phosphoglucomutase refined at 2.4 A resolution.
pubmed doi rcsb
molecule tags Phosphotransferase
total genus 181
structure length 561
sequence length 561
chains with identical sequence B
ec nomenclature ec 5.4.2.2: Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent).
pdb deposition date 1996-07-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00408 PGM_PMM_IV Phosphoglucomutase/phosphomannomutase, C-terminal domain
A PF02878 PGM_PMM_I Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
A PF02879 PGM_PMM_II Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
A PF02880 PGM_PMM_III Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.310.50 Alpha Beta 2-Layer Sandwich TATA-Binding Protein Alpha-D-phosphohexomutase, C-terminal domain 1lxtA04
3.40.120.10 Alpha Beta 3-Layer(aba) Sandwich Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 1lxtA02
3.40.120.10 Alpha Beta 3-Layer(aba) Sandwich Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 1lxtA03
3.40.120.10 Alpha Beta 3-Layer(aba) Sandwich Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 1lxtA01
3RSMA 1C47A 3ENOC 2F7LA 1WJWA 2H5AX 1TUOA 1K35A 3BKQX 3PMGA 5F9CA 1JDYA 2DKCA 1K2YX 1P5GX 2FKMX 2DKDA 5JN5A 2H4LX 2EHPA 3OLPA 1LXTA 2DKAA 2Z0FA 1P5DX 1VKLA 1WQAA 3I3WA 4HJHA 4WXAA 5BMPA 4WX8A 1PCMX 2FUVA 4IL8A 1KFQA 3PDKA 2JPIA 3NA5A 4MRQA 3ENCA 4BJUA 3C04A 5BMNA 1C4GA 1KFIA 2EIUA 5KL0A 2FKFA 5HSHA 4QG5A 1PCJX 5JMVD 5EPCA 3UW2A
chains in the Genus database with same CATH superfamily
4EJYA 3CWTA 2F7LA 1WJWA 2OOXA 3BKQX 1LWWA 1JDYA 5IYBP 1K2YX 2JOIA 3I0WA 3DPUA 1M5Q1 2DKDA 3D7QA 2XHIA 1RM1A 1YQKA 3OLPA 1NVPA 1TBAB 1VKLA 1WQAA 2QRDA 3IH7A 4WXAA 3OH9A 2FGTA 3TDHA 1YQMA 1QN3A 2NOBA 4IL8A 3RPJA 1KYDA 1VTLE 2JPIA 1VTOA 1EBMA 3KRMA 1LWYA 5BMNA 1D3UA 1T6AA 2HZSA 1QTPA 3T4NA 1N3AA 5KL0A 1B9KA 2IV9A 2QR1A 3F10A 3UW2A 2LAEA 1NGMA 3EAYA 3F0ZA 1YQRA 1LWVA 2H5AX 1PCZA 5F9CA 1QN5A 3H1ZA 1KYFA 1R4XA 4EJZA 1YTFA 2Z8UA 3ASMA 2FKMX 3D4VA 3CWSA 1YQLA 2NOLA 3HS9A 4PY5A 2DKAA 1P5DX 2HL9A 1PVSA 1CDWA 1EUVA 2QRCA 2NOIA 3NA5A 3OCIA 3OSEA 3C04A 2D0AA 2NLVA 3VN5A 1C9BB 3OSTA 1KFIA 5AN4A 4ROEB 3TE5A 1MPGA 2D0CA 1QN7A 4WZSD 1MP9A 2I5WA 4Q11A 3EIKA 2FKFA 2NWVA 4QG5A 1PCJX 2IV8A 4TPSA 3I0XA 4D7RA 1Q9UA 2Y8LA 1UT4A 1TUOA 1YTBA 4C7PA 1XSZA 2G30A 2V8QA 1QN6A 4B0AA 3CWAA 1KY7A 1VOLB 1QN4A 2EHPA 2EHBD 3DPTA 1LXTA 4EAGA 4HJHA 1M3QA 1NH2A 4WX8A 4EALA 3KTUA 1KFQA 3PDKA 3OC3C 2JHJA 1KO9A 1W80A 2NVMA 4DULA 3ENCA 1KYUA 3HS8A 1QNCA 1C4GA 5IYCP 1QNBA 4EAIA 2NOZA 4I8OA 3OGDA 1M3HA 1QNAA 1V5SA 2D0BA 1QNEA 4D7QA 1QN8A 1TBPA 5HSHA 2ZFDB 1AISA 5JMVD 5EPCA 2OOYA 2EIUA 3OSMA 3RSMA 3CVTA 1C47A 3ENOC 2QLVA 1KY6A 3CW7A 4EAKA 1J3MA 1K35A 2O3OA 3PMGA 1HU0A 2DKCA 2V92A 1P5GX 1FN7A 4ROCB 4EAJA 5IYDP 1E42A 2HZMA 1UT7A 5JN5A 2H4LX 4CFFA 1QTSA 2VJ0A 2Z0FA 3I3WA 5BMPA 2HKPA 3SNSA 2NOHA 2QREA 2PWWA 1DIZA 1PCMX 2FUVA 2YA3A 3ULXA 4RODB 2MZ8A 1N39A 2V9JA 2NOFA 1TGHA 1N3CA 4MRQA 1UL7A 2HL8A 2R5XA 2YH5A 4BJUA 3OH6A 1JFIC 2MJ7A 1QN9A 2JHNA 3N89A 2NOEA 1PZDA 3CWUA 3CVSA 2Y8QA 1VOKA
chains in the Genus database with same CATH topology
3RSMA 1C47A 3ENOC 2F7LA 1WJWA 2H5AX 1TUOA 1K35A 3BKQX 3PMGA 5F9CA 1JDYA 2DKCA 1K2YX 1P5GX 2FKMX 2DKDA 5JN5A 2H4LX 2EHPA 3OLPA 1LXTA 2DKAA 2Z0FA 1P5DX 1VKLA 1WQAA 3I3WA 4HJHA 4WXAA 5BMPA 4WX8A 1PCMX 2FUVA 4IL8A 1KFQA 3PDKA 2JPIA 3NA5A 4MRQA 3ENCA 4BJUA 3C04A 5BMNA 1C4GA 1KFIA 2EIUA 5KL0A 2FKFA 5HSHA 4QG5A 1PCJX 5JMVD 5EPCA 3UW2A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3RSM A;  1C47 A;  3ENO C;  2F7L A;  1WJW A;  2H5A X;  1TUO A;  1K35 A;  3BKQ X;  3PMG A;  5F9C A;  1JDY A;  2DKC A;  1K2Y X;  1P5G X;  2FKM X;  2DKD A;  5JN5 A;  2H4L X;  2EHP A;  3OLP A;  1LXT A;  2DKA A;  2Z0F A;  1P5D X;  1VKL A;  1WQA A;  3I3W A;  4HJH A;  4WXA A;  5BMP A;  4WX8 A;  1PCM X;  2FUV A;  4IL8 A;  1KFQ A;  3PDK A;  2JPI A;  3NA5 A;  4MRQ A;  3ENC A;  4BJU A;  3C04 A;  5BMN A;  1C4G A;  1KFI A;  2EIU A;  5KL0 A;  2FKF A;  5HSH A;  4QG5 A;  1PCJ X;  5JMV D;  5EPC A;  3UW2 A; 
#chains in the Genus database with same CATH topology
 4EJY A;  3CWT A;  2F7L A;  1WJW A;  2OOX A;  3BKQ X;  1LWW A;  1JDY A;  5IYB P;  1K2Y X;  2JOI A;  3I0W A;  3DPU A;  1M5Q 1;  2DKD A;  3D7Q A;  2XHI A;  1RM1 A;  1YQK A;  3OLP A;  1NVP A;  1TBA B;  1VKL A;  1WQA A;  2QRD A;  3IH7 A;  4WXA A;  3OH9 A;  2FGT A;  3TDH A;  1YQM A;  1QN3 A;  2NOB A;  4IL8 A;  3RPJ A;  1KYD A;  1VTL E;  2JPI A;  1VTO A;  1EBM A;  3KRM A;  1LWY A;  5BMN A;  1D3U A;  1T6A A;  2HZS A;  1QTP A;  3T4N A;  1N3A A;  5KL0 A;  1B9K A;  2IV9 A;  2QR1 A;  3F10 A;  3UW2 A;  2LAE A;  1NGM A;  3EAY A;  3F0Z A;  1YQR A;  1LWV A;  2H5A X;  1PCZ A;  5F9C A;  1QN5 A;  3H1Z A;  1KYF A;  1R4X A;  4EJZ A;  1YTF A;  2Z8U A;  3ASM A;  2FKM X;  3D4V A;  3CWS A;  1YQL A;  2NOL A;  3HS9 A;  4PY5 A;  2DKA A;  1P5D X;  2HL9 A;  1PVS A;  1CDW A;  1EUV A;  2QRC A;  2NOI A;  3NA5 A;  3OCI A;  3OSE A;  3C04 A;  2D0A A;  2NLV A;  3VN5 A;  1C9B B;  3OST A;  1KFI A;  5AN4 A;  4ROE B;  3TE5 A;  1MPG A;  2D0C A;  1QN7 A;  4WZS D;  1MP9 A;  2I5W A;  4Q11 A;  3EIK A;  2FKF A;  2NWV A;  4QG5 A;  1PCJ X;  2IV8 A;  4TPS A;  3I0X A;  4D7R A;  1Q9U A;  2Y8L A;  1UT4 A;  1TUO A;  1YTB A;  4C7P A;  1XSZ A;  2G30 A;  2V8Q A;  1QN6 A;  4B0A A;  3CWA A;  1KY7 A;  1VOL B;  1QN4 A;  2EHP A;  2EHB D;  3DPT A;  1LXT A;  4EAG A;  4HJH A;  1M3Q A;  1NH2 A;  4WX8 A;  4EAL A;  3KTU A;  1KFQ A;  3PDK A;  3OC3 C;  2JHJ A;  1KO9 A;  1W80 A;  2NVM A;  4DUL A;  3ENC A;  1KYU A;  3HS8 A;  1QNC A;  1C4G A;  5IYC P;  1QNB A;  4EAI A;  2NOZ A;  4I8O A;  3OGD A;  1M3H A;  1QNA A;  1V5S A;  2D0B A;  1QNE A;  4D7Q A;  1QN8 A;  1TBP A;  5HSH A;  2ZFD B;  1AIS A;  5JMV D;  5EPC A;  2OOY A;  2EIU A;  3OSM A;  3RSM A;  3CVT A;  1C47 A;  3ENO C;  2QLV A;  1KY6 A;  3CW7 A;  4EAK A;  1J3M A;  1K35 A;  2O3O A;  3PMG A;  1HU0 A;  2DKC A;  2V92 A;  1P5G X;  1FN7 A;  4ROC B;  4EAJ A;  5IYD P;  1E42 A;  2HZM A;  1UT7 A;  5JN5 A;  2H4L X;  4CFF A;  1QTS A;  2VJ0 A;  2Z0F A;  3I3W A;  5BMP A;  2HKP A;  3SNS A;  2NOH A;  2QRE A;  2PWW A;  1DIZ A;  1PCM X;  2FUV A;  2YA3 A;  3ULX A;  4ROD B;  2MZ8 A;  1N39 A;  2V9J A;  2NOF A;  1TGH A;  1N3C A;  4MRQ A;  1UL7 A;  2HL8 A;  2R5X A;  2YH5 A;  4BJU A;  3OH6 A;  1JFI C;  2MJ7 A;  1QN9 A;  2JHN A;  3N89 A;  2NOE A;  1PZD A;  3CWU A;  3CVS A;  2Y8Q A;  1VOK A; 
#chains in the Genus database with same CATH homology
 3RSM A;  1C47 A;  3ENO C;  2F7L A;  1WJW A;  2H5A X;  1TUO A;  1K35 A;  3BKQ X;  3PMG A;  5F9C A;  1JDY A;  2DKC A;  1K2Y X;  1P5G X;  2FKM X;  2DKD A;  5JN5 A;  2H4L X;  2EHP A;  3OLP A;  1LXT A;  2DKA A;  2Z0F A;  1P5D X;  1VKL A;  1WQA A;  3I3W A;  4HJH A;  4WXA A;  5BMP A;  4WX8 A;  1PCM X;  2FUV A;  4IL8 A;  1KFQ A;  3PDK A;  2JPI A;  3NA5 A;  4MRQ A;  3ENC A;  4BJU A;  3C04 A;  5BMN A;  1C4G A;  1KFI A;  2EIU A;  5KL0 A;  2FKF A;  5HSH A;  4QG5 A;  1PCJ X;  5JMV D;  5EPC A;  3UW2 A; 
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