1LXTA

Structure of phosphotransferase phosphoglucomutase from rabbit
Total Genus 181
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
181
sequence length
561
structure length
561
Chain Sequence
VKIVTVKTKAYPDQKPGTSGLRKRVKVFQSSTNYAENFIQSIISTVEPAQRQEATLVVGGDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKSGEHDFGAAFDGDGDRNMILGKHGFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQSVEDILKDHWHKFGRNFFTRYDYEEVEAEGATKMMKDLEALMFDRSFVGKQFSANDKVYTVEKADNFEYHDPVDGSVSKNQGLRLIFADGSRIIFRLSGTGSAGATIRLYIDSYEKDNAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Phosphotransferase
publication title Structure of rabbit muscle phosphoglucomutase refined at 2.4 A resolution.
pubmed doi rcsb
molecule keywords PHOSPHOGLUCOMUTASE (DEPHOSPHO FORM)
total genus 181
structure length 561
sequence length 561
chains with identical sequence B
ec nomenclature ec 5.4.2.2: Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent).
pdb deposition date 1996-07-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00408 PGM_PMM_IV Phosphoglucomutase/phosphomannomutase, C-terminal domain
A PF02878 PGM_PMM_I Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
A PF02879 PGM_PMM_II Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
A PF02880 PGM_PMM_III Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.310.50 Alpha Beta 2-Layer Sandwich TATA-Binding Protein Alpha-D-phosphohexomutase, C-terminal domain 1lxtA04
3.40.120.10 Alpha Beta 3-Layer(aba) Sandwich Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 1lxtA02
3.40.120.10 Alpha Beta 3-Layer(aba) Sandwich Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 1lxtA03
3.40.120.10 Alpha Beta 3-Layer(aba) Sandwich Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 1lxtA01
2H4LX 2Z0FA 3I3WA 1PCMX 1K35A 3PMGA 4HJHA 5KL0A 3ENOC 4WX8A 1LXTA 3NA5A 5BMNA 1WQAA 2FKFA 3PDKA 4IL8A 4BJUA 3BKQX 2DKAA 1K2YX 3RSMA 5JMVD 1C47A 2FUVA 4QG5A 1P5DX 2DKDA 5F9CA 5HSHA 1WJWA 1KFQA 1VKLA 2JPIA 2EHPA 1PCJX 2H5AX 4MRQA 3UW2A 2F7LA 2EIUA 1KFIA 3C04A 5JN5A 1C4GA 1P5GX 3ENCA 1TUOA 3OLPA 4WXAA 5BMPA 2DKCA 1JDYA 2FKMX 5EPCA
chains in the Genus database with same CATH superfamily
4B0AA 2H4LX 3I3WA 1KO9A 1NVPA 2Y8QA 3PMGA 2QR1A 2D0AA 1C9BB 5IYDP 2NOZA 1WQAA 2FKFA 3PDKA 2NOIA 2YA3A 4IL8A 3OCIA 4C7PA 3OH9A 1E42A 1C47A 3EAYA 2FUVA 3OGDA 1P5DX 2DKDA 5F9CA 3CVSA 1TGHA 1KY7A 2NOBA 1WJWA 2JPIA 2OOYA 1PCZA 2EHPA 1LWVA 3EIKA 4EAGA 1QN4A 2EIUA 3C04A 5IYBP 1TUOA 3RPJA 3OLPA 3SNSA 3DPTA 1VTOA 3D7QA 2QRDA 4TPSA 1KYDA 2D0BA 5BMPA 1QNEA 4EAKA 1VOKA 5EPCA 3OSMA 2EHBD 3HS9A 2HZSA 4EAIA 1W80A 3IH7A 2NOFA 2HZMA 1PCMX 4EALA 1YQLA 5KL0A 3ENOC 2NOLA 1TBAB 5IYCP 1QNAA 4PY5A 2HL8A 4EAJA 2NOEA 2QREA 1N3CA 2Z8UA 2FGTA 3RSMA 3OC3C 2NOHA 4QG5A 3T4NA 2G30A 1YQMA 1YQKA 1N39A 1N3AA 1YTBA 1Q9UA 1XSZA 3DPUA 2OOXA 4MRQA 1VOLB 2HKPA 2R5XA 3CWSA 3N89A 4EJYA 1M3QA 1KY6A 1KFIA 3I0XA 1B9KA 4D7RA 2D0CA 1QN5A 1UT4A 3ENCA 1VTLE 1CDWA 1UL7A 1MP9A 1JDYA 1QTSA 1LWWA 1DIZA 2JOIA 2Z0FA 1MPGA 1QN9A 2QRCA 3F10A 2ZFDB 2QLVA 4HJHA 4WZSD 1KYUA 1AISA 1KYFA 1QNBA 1QNCA 1LXTA 1YTFA 5BMNA 1HU0A 5AN4A 2NVMA 4BJUA 2V92A 3BKQX 2DKAA 1K2YX 5JMVD 3CWAA 4RODB 1RM1A 3HS8A 3D4VA 3KTUA 1KFQA 2MZ8A 1PCJX 1QN7A 3VN5A 1QTPA 2F7LA 3H1ZA 2IV8A 2V9JA 1JFIC 5JN5A 3CWUA 3ASMA 1D3UA 1TBPA 4WXAA 2DKCA 2NLVA 2VJ0A 1V5SA 2FKMX 3OSTA 4D7QA 1T6AA 1NH2A 1EBMA 1PVSA 2LAEA 3OH6A 4ROCB 2XHIA 1PZDA 1K35A 3CVTA 2JHJA 3KRMA 3I0WA 1R4XA 4WX8A 1NGMA 3NA5A 3CWTA 1EUVA 2O3OA 2V8QA 2Y8LA 1M3HA 3OSEA 4EJZA 3CW7A 2MJ7A 3TE5A 5HSHA 1FN7A 4Q11A 1QN8A 3TDHA 2NWVA 1VKLA 4CFFA 1J3MA 2H5AX 3UW2A 1UT7A 1M5Q1 1YQRA 1LWYA 1C4GA 1P5GX 3ULXA 2JHNA 2YH5A 4I8OA 4ROEB 1QN6A 2I5WA 2IV9A 4DULA 1QN3A 3F0ZA 2PWWA 2HL9A
chains in the Genus database with same CATH topology
2H4LX 2Z0FA 3I3WA 1PCMX 1K35A 3PMGA 4HJHA 5KL0A 3ENOC 4WX8A 1LXTA 3NA5A 5BMNA 1WQAA 2FKFA 3PDKA 4IL8A 4BJUA 3BKQX 2DKAA 1K2YX 3RSMA 5JMVD 1C47A 2FUVA 4QG5A 1P5DX 2DKDA 5F9CA 5HSHA 1WJWA 1KFQA 1VKLA 2JPIA 2EHPA 1PCJX 2H5AX 4MRQA 3UW2A 2F7LA 2EIUA 1KFIA 3C04A 5JN5A 1C4GA 1P5GX 3ENCA 1TUOA 3OLPA 4WXAA 5BMPA 2DKCA 1JDYA 2FKMX 5EPCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2H4L X;  2Z0F A;  3I3W A;  1PCM X;  1K35 A;  3PMG A;  4HJH A;  5KL0 A;  3ENO C;  4WX8 A;  1LXT A;  3NA5 A;  5BMN A;  1WQA A;  2FKF A;  3PDK A;  4IL8 A;  4BJU A;  3BKQ X;  2DKA A;  1K2Y X;  3RSM A;  5JMV D;  1C47 A;  2FUV A;  4QG5 A;  1P5D X;  2DKD A;  5F9C A;  5HSH A;  1WJW A;  1KFQ A;  1VKL A;  2JPI A;  2EHP A;  1PCJ X;  2H5A X;  4MRQ A;  3UW2 A;  2F7L A;  2EIU A;  1KFI A;  3C04 A;  5JN5 A;  1C4G A;  1P5G X;  3ENC A;  1TUO A;  3OLP A;  4WXA A;  5BMP A;  2DKC A;  1JDY A;  2FKM X;  5EPC A; 
#chains in the Genus database with same CATH topology
 4B0A A;  2H4L X;  3I3W A;  1KO9 A;  1NVP A;  2Y8Q A;  3PMG A;  2QR1 A;  2D0A A;  1C9B B;  5IYD P;  2NOZ A;  1WQA A;  2FKF A;  3PDK A;  2NOI A;  2YA3 A;  4IL8 A;  3OCI A;  4C7P A;  3OH9 A;  1E42 A;  1C47 A;  3EAY A;  2FUV A;  3OGD A;  1P5D X;  2DKD A;  5F9C A;  3CVS A;  1TGH A;  1KY7 A;  2NOB A;  1WJW A;  2JPI A;  2OOY A;  1PCZ A;  2EHP A;  1LWV A;  3EIK A;  4EAG A;  1QN4 A;  2EIU A;  3C04 A;  5IYB P;  1TUO A;  3RPJ A;  3OLP A;  3SNS A;  3DPT A;  1VTO A;  3D7Q A;  2QRD A;  4TPS A;  1KYD A;  2D0B A;  5BMP A;  1QNE A;  4EAK A;  1VOK A;  5EPC A;  3OSM A;  2EHB D;  3HS9 A;  2HZS A;  4EAI A;  1W80 A;  3IH7 A;  2NOF A;  2HZM A;  1PCM X;  4EAL A;  1YQL A;  5KL0 A;  3ENO C;  2NOL A;  1TBA B;  5IYC P;  1QNA A;  4PY5 A;  2HL8 A;  4EAJ A;  2NOE A;  2QRE A;  1N3C A;  2Z8U A;  2FGT A;  3RSM A;  3OC3 C;  2NOH A;  4QG5 A;  3T4N A;  2G30 A;  1YQM A;  1YQK A;  1N39 A;  1N3A A;  1YTB A;  1Q9U A;  1XSZ A;  3DPU A;  2OOX A;  4MRQ A;  1VOL B;  2HKP A;  2R5X A;  3CWS A;  3N89 A;  4EJY A;  1M3Q A;  1KY6 A;  1KFI A;  3I0X A;  1B9K A;  4D7R A;  2D0C A;  1QN5 A;  1UT4 A;  3ENC A;  1VTL E;  1CDW A;  1UL7 A;  1MP9 A;  1JDY A;  1QTS A;  1LWW A;  1DIZ A;  2JOI A;  2Z0F A;  1MPG A;  1QN9 A;  2QRC A;  3F10 A;  2ZFD B;  2QLV A;  4HJH A;  4WZS D;  1KYU A;  1AIS A;  1KYF A;  1QNB A;  1QNC A;  1LXT A;  1YTF A;  5BMN A;  1HU0 A;  5AN4 A;  2NVM A;  4BJU A;  2V92 A;  3BKQ X;  2DKA A;  1K2Y X;  5JMV D;  3CWA A;  4ROD B;  1RM1 A;  3HS8 A;  3D4V A;  3KTU A;  1KFQ A;  2MZ8 A;  1PCJ X;  1QN7 A;  3VN5 A;  1QTP A;  2F7L A;  3H1Z A;  2IV8 A;  2V9J A;  1JFI C;  5JN5 A;  3CWU A;  3ASM A;  1D3U A;  1TBP A;  4WXA A;  2DKC A;  2NLV A;  2VJ0 A;  1V5S A;  2FKM X;  3OST A;  4D7Q A;  1T6A A;  1NH2 A;  1EBM A;  1PVS A;  2LAE A;  3OH6 A;  4ROC B;  2XHI A;  1PZD A;  1K35 A;  3CVT A;  2JHJ A;  3KRM A;  3I0W A;  1R4X A;  4WX8 A;  1NGM A;  3NA5 A;  3CWT A;  1EUV A;  2O3O A;  2V8Q A;  2Y8L A;  1M3H A;  3OSE A;  4EJZ A;  3CW7 A;  2MJ7 A;  3TE5 A;  5HSH A;  1FN7 A;  4Q11 A;  1QN8 A;  3TDH A;  2NWV A;  1VKL A;  4CFF A;  1J3M A;  2H5A X;  3UW2 A;  1UT7 A;  1M5Q 1;  1YQR A;  1LWY A;  1C4G A;  1P5G X;  3ULX A;  2JHN A;  2YH5 A;  4I8O A;  4ROE B;  1QN6 A;  2I5W A;  2IV9 A;  4DUL A;  1QN3 A;  3F0Z A;  2PWW A;  2HL9 A; 
#chains in the Genus database with same CATH homology
 2H4L X;  2Z0F A;  3I3W A;  1PCM X;  1K35 A;  3PMG A;  4HJH A;  5KL0 A;  3ENO C;  4WX8 A;  1LXT A;  3NA5 A;  5BMN A;  1WQA A;  2FKF A;  3PDK A;  4IL8 A;  4BJU A;  3BKQ X;  2DKA A;  1K2Y X;  3RSM A;  5JMV D;  1C47 A;  2FUV A;  4QG5 A;  1P5D X;  2DKD A;  5F9C A;  5HSH A;  1WJW A;  1KFQ A;  1VKL A;  2JPI A;  2EHP A;  1PCJ X;  2H5A X;  4MRQ A;  3UW2 A;  2F7L A;  2EIU A;  1KFI A;  3C04 A;  5JN5 A;  1C4G A;  1P5G X;  3ENC A;  1TUO A;  3OLP A;  4WXA A;  5BMP A;  2DKC A;  1JDY A;  2FKM X;  5EPC A; 
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