1MCXA

Structure of full-length annexin a1 in the presence of calcium
Total Genus 118
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
118
sequence length
304
structure length
304
Chain Sequence
TFNPSSDVEALHKAITVKGVDEATIIEILTKRTNAQRQQIKAAYLQEKGKPLDEALKKALTGHLEEVALALLKTPAQFDADELRAAMKGLGTDEDTLNEILASRTNREIREINRVYKEELKRDLAKDITSDTSGDYQKALLSLAKGDRSEDLAINDDLADTDARALYEAGERRKGTDLNVFITILTTRSYPHLRRVFQKYSKYSKHDMNKVLDLELKGDIENCLTVVVKCATSKPMFFAEKLHQAMKGIGTRHKTLIRIMVSRSEIDMNDIKACYQKLYGISLCQAILDETKGDYEKILVALCG
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Metal binding protein
molecule keywords ANNEXIN I
publication title A Calcium-driven Conformational Switch of the N-terminaland Core Domains of Annexin A1
pubmed doi rcsb
source organism Sus scrofa
total genus 118
structure length 304
sequence length 304
ec nomenclature
pdb deposition date 2002-08-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00191 Annexin Annexin
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 1mcxA04
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 1mcxA01
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 1mcxA02
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 1mcxA03
1BC0A 2XO2A 2RANA 4MDVA 1I4AA 1N41A 2II2A 1W7BA 1ANWA 1SAVA 2XO3A 1MCXA 4EVHA 1BCZA 4X9PA 1BC1A 2ZHJA 1AEIA 1HAKA 2H0LA 1HVDA 1XJLA 2Q4CA 1AVHA 1BO9A 2HYVA 1AOWA 1AVRA 1HM6A 1N44A 1DM5A 2IICA 2ZOCA 3BRXA 2IE7A 1DK5A 2IE6A 1AXNA 1HVFA 2ZHIA 2H0MA 1YJ0A 1W3WA 1YCNA 1ANXA 2H0KA 2HYUA 1HVGA 1M9IA 4HREA 1W45A 1AVCA 1A8AA 1A8BA 1HVEA 1N00A 1N42A 1BCWA 1BC3A 1ALAA 4EVFA 1AIIA 1G5NA 2HYWA 1ANNA 4MDUA 1YIIA 1BCYA
chains in the Genus database with same CATH superfamily
1XSZA 2RANA 1N41A 1S9DE 1XT0B 2ZHJA 2H0LA 4A4PA 1AVHA 4JMIA 4Q2SA 1N44A 1DM5A 2IICA 2ZOCA 2IE7A 2IE6A 1BC9A 4JMOA 1R8QE 1ANXA 2H0KA 3L8NA 1A8AA 1AVCA 2R0DA 1BCWA 2HSNA 1AIIA 3ABOA 3AO0A 4FHRB 2K6XA 4MDUA 1SAVA 2XO3A 3AJCA 4EVHA 4Z21A 4KN4X 3SOHB 1AOWA 1AVRA 4JXHA 1PBVA 4FQ0C 4HREA 1M9IA 1UPTB 4JWLA 1HVEA 2R09A 3TW5A 1N42A 3USYA 4JK1X 1RE0B 4MDVA 1I4AA 2II2A 4KN7X 1C1KA 1W7BA 1R4AE 3SWVA 1ANWA 1LKVX 1MCXA 4C0AA 1BC1A 4C7PA 1XJLA 2Q4CA 2HYVA 1HM6A 3ABRA 3BRXA 1DK5A 1HVFA 2QEZA 2ZHIA 2H0MA 1W3WA 1YCNA 2HYUA 1HVGA 4D7RA 4KMUX 3USWA 1KU1A 4EVFA 1G5NA 2HYWA 3ABSA 1ANNA 1YGMA 1BC0A 2XO2A 3HJLA 1BCZA 4X9PA 1AEIA 4OIYA 1HAKA 1HVDA 3LTLA 1BO9A 2VXGA 1Q8DA 3ABQA 4L5MA 1AXNA 2OY9A 1YJ0A 4D7QA 1W45A 1A8BA 1N00A 1R8ME 1BC3A 1ALAA 1QC7A 1R8SE 3ANYA 1YIIA 1BCYA
chains in the Genus database with same CATH topology
1BC0A 2XO2A 2RANA 4MDVA 1I4AA 1N41A 2II2A 1W7BA 1ANWA 1SAVA 2XO3A 1MCXA 4EVHA 1BCZA 4X9PA 1BC1A 2ZHJA 1AEIA 1HAKA 2H0LA 1HVDA 1XJLA 2Q4CA 1AVHA 1BO9A 2HYVA 1AOWA 1AVRA 1HM6A 1N44A 1DM5A 2IICA 2ZOCA 3BRXA 2IE7A 1DK5A 2IE6A 1AXNA 1HVFA 2ZHIA 2H0MA 1YJ0A 1W3WA 1YCNA 1ANXA 2H0KA 2HYUA 1HVGA 1M9IA 4HREA 1W45A 1AVCA 1A8AA 1A8BA 1HVEA 1N00A 1N42A 1BCWA 1BC3A 1ALAA 4EVFA 1AIIA 1G5NA 2HYWA 1ANNA 4MDUA 1YIIA 1BCYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1BC0 A;  2XO2 A;  2RAN A;  4MDV A;  1I4A A;  1N41 A;  2II2 A;  1W7B A;  1ANW A;  1SAV A;  2XO3 A;  1MCX A;  4EVH A;  1BCZ A;  4X9P A;  1BC1 A;  2ZHJ A;  1AEI A;  1HAK A;  2H0L A;  1HVD A;  1XJL A;  2Q4C A;  1AVH A;  1BO9 A;  2HYV A;  1AOW A;  1AVR A;  1HM6 A;  1N44 A;  1DM5 A;  2IIC A;  2ZOC A;  3BRX A;  2IE7 A;  1DK5 A;  2IE6 A;  1AXN A;  1HVF A;  2ZHI A;  2H0M A;  1YJ0 A;  1W3W A;  1YCN A;  1ANX A;  2H0K A;  2HYU A;  1HVG A;  1M9I A;  4HRE A;  1W45 A;  1AVC A;  1A8A A;  1A8B A;  1HVE A;  1N00 A;  1N42 A;  1BCW A;  1BC3 A;  1ALA A;  4EVF A;  1AII A;  1G5N A;  2HYW A;  1ANN A;  4MDU A;  1YII A;  1BCY A; 
#chains in the Genus database with same CATH topology
 1XSZ A;  2RAN A;  1N41 A;  1S9D E;  1XT0 B;  2ZHJ A;  2H0L A;  4A4P A;  1AVH A;  4JMI A;  4Q2S A;  1N44 A;  1DM5 A;  2IIC A;  2ZOC A;  2IE7 A;  2IE6 A;  1BC9 A;  4JMO A;  1R8Q E;  1ANX A;  2H0K A;  3L8N A;  1A8A A;  1AVC A;  2R0D A;  1BCW A;  2HSN A;  1AII A;  3ABO A;  3AO0 A;  4FHR B;  2K6X A;  4MDU A;  1SAV A;  2XO3 A;  3AJC A;  4EVH A;  4Z21 A;  4KN4 X;  3SOH B;  1AOW A;  1AVR A;  4JXH A;  1PBV A;  4FQ0 C;  4HRE A;  1M9I A;  1UPT B;  4JWL A;  1HVE A;  2R09 A;  3TW5 A;  1N42 A;  3USY A;  4JK1 X;  1RE0 B;  4MDV A;  1I4A A;  2II2 A;  4KN7 X;  1C1K A;  1W7B A;  1R4A E;  3SWV A;  1ANW A;  1LKV X;  1MCX A;  4C0A A;  1BC1 A;  4C7P A;  1XJL A;  2Q4C A;  2HYV A;  1HM6 A;  3ABR A;  3BRX A;  1DK5 A;  1HVF A;  2QEZ A;  2ZHI A;  2H0M A;  1W3W A;  1YCN A;  2HYU A;  1HVG A;  4D7R A;  4KMU X;  3USW A;  1KU1 A;  4EVF A;  1G5N A;  2HYW A;  3ABS A;  1ANN A;  1YGM A;  1BC0 A;  2XO2 A;  3HJL A;  1BCZ A;  4X9P A;  1AEI A;  4OIY A;  1HAK A;  1HVD A;  3LTL A;  1BO9 A;  2VXG A;  1Q8D A;  3ABQ A;  4L5M A;  1AXN A;  2OY9 A;  1YJ0 A;  4D7Q A;  1W45 A;  1A8B A;  1N00 A;  1R8M E;  1BC3 A;  1ALA A;  1QC7 A;  1R8S E;  3ANY A;  1YII A;  1BCY A; 
#chains in the Genus database with same CATH homology
 1BC0 A;  2XO2 A;  2RAN A;  4MDV A;  1I4A A;  1N41 A;  2II2 A;  1W7B A;  1ANW A;  1SAV A;  2XO3 A;  1MCX A;  4EVH A;  1BCZ A;  4X9P A;  1BC1 A;  2ZHJ A;  1AEI A;  1HAK A;  2H0L A;  1HVD A;  1XJL A;  2Q4C A;  1AVH A;  1BO9 A;  2HYV A;  1AOW A;  1AVR A;  1HM6 A;  1N44 A;  1DM5 A;  2IIC A;  2ZOC A;  3BRX A;  2IE7 A;  1DK5 A;  2IE6 A;  1AXN A;  1HVF A;  2ZHI A;  2H0M A;  1YJ0 A;  1W3W A;  1YCN A;  1ANX A;  2H0K A;  2HYU A;  1HVG A;  1M9I A;  4HRE A;  1W45 A;  1AVC A;  1A8A A;  1A8B A;  1HVE A;  1N00 A;  1N42 A;  1BCW A;  1BC3 A;  1ALA A;  4EVF A;  1AII A;  1G5N A;  2HYW A;  1ANN A;  4MDU A;  1YII A;  1BCY A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...