1MHLC

Crystal structure of human myeloperoxidase isoform c crystallized in space group p2(1) at ph 5.5 and 20 deg c
Total Genus 150
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
150
sequence length
466
structure length
466
Chain Sequence
VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Myeloperoxidase
molecule keywords MYELOPEROXIDASE
publication title Structure of the green heme in myeloperoxidase.
pubmed doi rcsb
total genus 150
structure length 466
sequence length 466
chains with identical sequence D
ec nomenclature ec 1.11.2.2: Myeloperoxidase.
pdb deposition date 1995-06-09
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.640.10 Mainly Alpha Orthogonal Bundle Myeloperoxidase, subunit C Haem peroxidase domain superfamily, animal type 1mhlC00
3N8YB 3N8WB 3PGHA 5IKTA 4M11A 3ZS1C 3NTBA 3TGYA 2EFBA 5COXA 2IPSA 3HS7A 2R5LA 3N8YA 3N8WA 3F9PC 4GM7A 3OLTA 5JW1A 3N8VA 3N8XA 1D5LC 3BXIA 3TZIA 3N8FA 4IG5A 3UBAA 1EBVA 3GCLA 1EQHA 1HT8A 3OGWA 3OLUA 1D7WC 3ZS0C 5IKQA 2QQTA 4GN6A 2OYEP 5F19A 1MHLC 2PUMA 3RKEA 5JVZA 4RRWA 1DNWC 4OTYA 1CX2A 2NQXA 4NJBA 1U67A 3MQEA 5F1AA 2QRBA 4OTJA 2E9EA 3FNLA 4KSZA 3HS6A 1CXPC 3MDLA 1DIYA 1DNUC 2OJVA 5GH0A 2QPKA 5KIRA 4QJQA 3GCJA 4M10A 2IKCA 4E1GA 3NT1A 3KRKA 5B72A 4HHSA 4QYQA 2O86A 3S4FA 5FDQA 1PTHA 3QMOA 1HT5A 3NIUA 3NAKA 1D2VC 1PXXA 2GJMA 4RS0A 3LN0A 3KRQA 3NYHA 4NT3A 3Q9KA 5IKRA 3HS5A 4LJJA 1PGEA 4Z0LA 3ERIA 4Y55A 1IGXA 1IGZA 3N8ZA 5GLSA 4KVKA 4OEKA 4RRXA 3QF1A 4COXA 5JVYA 5FIWC 2PT3A 2OYUP 4N7AA 1CVUA 3Q7DA 3KK6A 5HPWA 4C1MC 4RUTA 2EHAA 5IKVA 4RRZA 3GC1A 3R5QA 3NTGA 3LN1A 4PNXA 4DL1C 3I6NA 4RRYA 3R4XA 2Z5ZA 1PRHA 1CQEA 1MYPC 3ERHA 4PH9A 3QH0A 4FM5A 5FF1A 4KVJA 3RR3A 1DDXA 3R55A 4O1ZA 3SXVA 1Q4GA 1EQGA 3QL6A 4KVLA 3V6QA 6COXA 3GCKA 2AYLA 3PY4A 3R5OA 3FAQA 1FE2A 4HHRA 4MSFA
chains in the Genus database with same CATH superfamily
3N8YB 3N8WB 3PGHA 5IKTA 4M11A 3ZS1C 3NTBA 3TGYA 2EFBA 5COXA 2IPSA 3HS7A 2R5LA 3N8YA 3N8WA 3F9PC 4GM7A 3OLTA 5JW1A 3N8VA 3N8XA 1D5LC 3BXIA 3TZIA 3N8FA 4IG5A 3UBAA 1EBVA 3GCLA 1EQHA 1HT8A 3OGWA 3OLUA 1D7WC 3ZS0C 5IKQA 2QQTA 4GN6A 2OYEP 5F19A 1MHLC 2PUMA 3RKEA 5JVZA 4RRWA 1DNWC 4OTYA 1CX2A 2NQXA 4NJBA 1U67A 3MQEA 5F1AA 2QRBA 4OTJA 2E9EA 3FNLA 4KSZA 3HS6A 1CXPC 3MDLA 1DIYA 1DNUC 2OJVA 5GH0A 2QPKA 5KIRA 4QJQA 3GCJA 4M10A 2IKCA 4E1GA 3NT1A 3KRKA 5B72A 4HHSA 4QYQA 2O86A 3S4FA 5FDQA 1PTHA 3QMOA 1HT5A 3NIUA 3NAKA 1D2VC 1PXXA 2GJMA 4RS0A 3LN0A 3KRQA 3NYHA 4NT3A 3Q9KA 5IKRA 3HS5A 4LJJA 1PGEA 4Z0LA 3ERIA 4Y55A 1IGXA 1IGZA 3N8ZA 5GLSA 4KVKA 4OEKA 4RRXA 3QF1A 4COXA 5JVYA 5FIWC 2PT3A 2OYUP 4N7AA 1CVUA 3Q7DA 3KK6A 5HPWA 4C1MC 4RUTA 2EHAA 5IKVA 4RRZA 3GC1A 3R5QA 3NTGA 3LN1A 4PNXA 4DL1C 3I6NA 4RRYA 3R4XA 2Z5ZA 1PRHA 1CQEA 1MYPC 3ERHA 4PH9A 3QH0A 4FM5A 5FF1A 4KVJA 3RR3A 1DDXA 3R55A 4O1ZA 3SXVA 1Q4GA 1EQGA 3QL6A 4KVLA 3V6QA 6COXA 3GCKA 2AYLA 3PY4A 3R5OA 3FAQA 1FE2A 4HHRA 4MSFA
chains in the Genus database with same CATH topology
3N8YB 3N8WB 3PGHA 5IKTA 4M11A 3ZS1C 3NTBA 3TGYA 2EFBA 5COXA 2IPSA 3HS7A 2R5LA 3N8YA 3N8WA 3F9PC 4GM7A 3OLTA 5JW1A 3N8VA 3N8XA 1D5LC 3BXIA 3TZIA 3N8FA 4IG5A 3UBAA 1EBVA 3GCLA 1EQHA 1HT8A 3OGWA 3OLUA 1D7WC 3ZS0C 5IKQA 2QQTA 4GN6A 2OYEP 5F19A 1MHLC 2PUMA 3RKEA 5JVZA 4RRWA 1DNWC 4OTYA 1CX2A 2NQXA 4NJBA 1U67A 3MQEA 5F1AA 2QRBA 4OTJA 2E9EA 3FNLA 4KSZA 3HS6A 1CXPC 3MDLA 1DIYA 1DNUC 2OJVA 5GH0A 2QPKA 5KIRA 4QJQA 3GCJA 4M10A 2IKCA 4E1GA 3NT1A 3KRKA 5B72A 4HHSA 4QYQA 2O86A 3S4FA 5FDQA 1PTHA 3QMOA 1HT5A 3NIUA 3NAKA 1D2VC 1PXXA 2GJMA 4RS0A 3LN0A 3KRQA 3NYHA 4NT3A 3Q9KA 5IKRA 3HS5A 4LJJA 1PGEA 4Z0LA 3ERIA 4Y55A 1IGXA 1IGZA 3N8ZA 5GLSA 4KVKA 4OEKA 4RRXA 3QF1A 4COXA 5JVYA 5FIWC 2PT3A 2OYUP 4N7AA 1CVUA 3Q7DA 3KK6A 5HPWA 4C1MC 4RUTA 2EHAA 5IKVA 4RRZA 3GC1A 3R5QA 3NTGA 3LN1A 4PNXA 4DL1C 3I6NA 4RRYA 3R4XA 2Z5ZA 1PRHA 1CQEA 1MYPC 3ERHA 4PH9A 3QH0A 4FM5A 5FF1A 4KVJA 3RR3A 1DDXA 3R55A 4O1ZA 3SXVA 1Q4GA 1EQGA 3QL6A 4KVLA 3V6QA 6COXA 3GCKA 2AYLA 3PY4A 3R5OA 3FAQA 1FE2A 4HHRA 4MSFA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3N8Y B;  3N8W B;  3PGH A;  5IKT A;  4M11 A;  3ZS1 C;  3NTB A;  3TGY A;  2EFB A;  5COX A;  2IPS A;  3HS7 A;  2R5L A;  3N8Y A;  3N8W A;  3F9P C;  4GM7 A;  3OLT A;  5JW1 A;  3N8V A;  3N8X A;  1D5L C;  3BXI A;  3TZI A;  3N8F A;  4IG5 A;  3UBA A;  1EBV A;  3GCL A;  1EQH A;  1HT8 A;  3OGW A;  3OLU A;  1D7W C;  3ZS0 C;  5IKQ A;  2QQT A;  4GN6 A;  2OYE P;  5F19 A;  1MHL C;  2PUM A;  3RKE A;  5JVZ A;  4RRW A;  1DNW C;  4OTY A;  1CX2 A;  2NQX A;  4NJB A;  1U67 A;  3MQE A;  5F1A A;  2QRB A;  4OTJ A;  2E9E A;  3FNL A;  4KSZ A;  3HS6 A;  1CXP C;  3MDL A;  1DIY A;  1DNU C;  2OJV A;  5GH0 A;  2QPK A;  5KIR A;  4QJQ A;  3GCJ A;  4M10 A;  2IKC A;  4E1G A;  3NT1 A;  3KRK A;  5B72 A;  4HHS A;  4QYQ A;  2O86 A;  3S4F A;  5FDQ A;  1PTH A;  3QMO A;  1HT5 A;  3NIU A;  3NAK A;  1D2V C;  1PXX A;  2GJM A;  4RS0 A;  3LN0 A;  3KRQ A;  3NYH A;  4NT3 A;  3Q9K A;  5IKR A;  3HS5 A;  4LJJ A;  1PGE A;  4Z0L A;  3ERI A;  4Y55 A;  1IGX A;  1IGZ A;  3N8Z A;  5GLS A;  4KVK A;  4OEK A;  4RRX A;  3QF1 A;  4COX A;  5JVY A;  5FIW C;  2PT3 A;  2OYU P;  4N7A A;  1CVU A;  3Q7D A;  3KK6 A;  5HPW A;  4C1M C;  4RUT A;  2EHA A;  5IKV A;  4RRZ A;  3GC1 A;  3R5Q A;  3NTG A;  3LN1 A;  4PNX A;  4DL1 C;  3I6N A;  4RRY A;  3R4X A;  2Z5Z A;  1PRH A;  1CQE A;  1MYP C;  3ERH A;  4PH9 A;  3QH0 A;  4FM5 A;  5FF1 A;  4KVJ A;  3RR3 A;  1DDX A;  3R55 A;  4O1Z A;  3SXV A;  1Q4G A;  1EQG A;  3QL6 A;  4KVL A;  3V6Q A;  6COX A;  3GCK A;  2AYL A;  3PY4 A;  3R5O A;  3FAQ A;  1FE2 A;  4HHR A;  4MSF A; 
#chains in the Genus database with same CATH topology
 3N8Y B;  3N8W B;  3PGH A;  5IKT A;  4M11 A;  3ZS1 C;  3NTB A;  3TGY A;  2EFB A;  5COX A;  2IPS A;  3HS7 A;  2R5L A;  3N8Y A;  3N8W A;  3F9P C;  4GM7 A;  3OLT A;  5JW1 A;  3N8V A;  3N8X A;  1D5L C;  3BXI A;  3TZI A;  3N8F A;  4IG5 A;  3UBA A;  1EBV A;  3GCL A;  1EQH A;  1HT8 A;  3OGW A;  3OLU A;  1D7W C;  3ZS0 C;  5IKQ A;  2QQT A;  4GN6 A;  2OYE P;  5F19 A;  1MHL C;  2PUM A;  3RKE A;  5JVZ A;  4RRW A;  1DNW C;  4OTY A;  1CX2 A;  2NQX A;  4NJB A;  1U67 A;  3MQE A;  5F1A A;  2QRB A;  4OTJ A;  2E9E A;  3FNL A;  4KSZ A;  3HS6 A;  1CXP C;  3MDL A;  1DIY A;  1DNU C;  2OJV A;  5GH0 A;  2QPK A;  5KIR A;  4QJQ A;  3GCJ A;  4M10 A;  2IKC A;  4E1G A;  3NT1 A;  3KRK A;  5B72 A;  4HHS A;  4QYQ A;  2O86 A;  3S4F A;  5FDQ A;  1PTH A;  3QMO A;  1HT5 A;  3NIU A;  3NAK A;  1D2V C;  1PXX A;  2GJM A;  4RS0 A;  3LN0 A;  3KRQ A;  3NYH A;  4NT3 A;  3Q9K A;  5IKR A;  3HS5 A;  4LJJ A;  1PGE A;  4Z0L A;  3ERI A;  4Y55 A;  1IGX A;  1IGZ A;  3N8Z A;  5GLS A;  4KVK A;  4OEK A;  4RRX A;  3QF1 A;  4COX A;  5JVY A;  5FIW C;  2PT3 A;  2OYU P;  4N7A A;  1CVU A;  3Q7D A;  3KK6 A;  5HPW A;  4C1M C;  4RUT A;  2EHA A;  5IKV A;  4RRZ A;  3GC1 A;  3R5Q A;  3NTG A;  3LN1 A;  4PNX A;  4DL1 C;  3I6N A;  4RRY A;  3R4X A;  2Z5Z A;  1PRH A;  1CQE A;  1MYP C;  3ERH A;  4PH9 A;  3QH0 A;  4FM5 A;  5FF1 A;  4KVJ A;  3RR3 A;  1DDX A;  3R55 A;  4O1Z A;  3SXV A;  1Q4G A;  1EQG A;  3QL6 A;  4KVL A;  3V6Q A;  6COX A;  3GCK A;  2AYL A;  3PY4 A;  3R5O A;  3FAQ A;  1FE2 A;  4HHR A;  4MSF A; 
#chains in the Genus database with same CATH homology
 3N8Y B;  3N8W B;  3PGH A;  5IKT A;  4M11 A;  3ZS1 C;  3NTB A;  3TGY A;  2EFB A;  5COX A;  2IPS A;  3HS7 A;  2R5L A;  3N8Y A;  3N8W A;  3F9P C;  4GM7 A;  3OLT A;  5JW1 A;  3N8V A;  3N8X A;  1D5L C;  3BXI A;  3TZI A;  3N8F A;  4IG5 A;  3UBA A;  1EBV A;  3GCL A;  1EQH A;  1HT8 A;  3OGW A;  3OLU A;  1D7W C;  3ZS0 C;  5IKQ A;  2QQT A;  4GN6 A;  2OYE P;  5F19 A;  1MHL C;  2PUM A;  3RKE A;  5JVZ A;  4RRW A;  1DNW C;  4OTY A;  1CX2 A;  2NQX A;  4NJB A;  1U67 A;  3MQE A;  5F1A A;  2QRB A;  4OTJ A;  2E9E A;  3FNL A;  4KSZ A;  3HS6 A;  1CXP C;  3MDL A;  1DIY A;  1DNU C;  2OJV A;  5GH0 A;  2QPK A;  5KIR A;  4QJQ A;  3GCJ A;  4M10 A;  2IKC A;  4E1G A;  3NT1 A;  3KRK A;  5B72 A;  4HHS A;  4QYQ A;  2O86 A;  3S4F A;  5FDQ A;  1PTH A;  3QMO A;  1HT5 A;  3NIU A;  3NAK A;  1D2V C;  1PXX A;  2GJM A;  4RS0 A;  3LN0 A;  3KRQ A;  3NYH A;  4NT3 A;  3Q9K A;  5IKR A;  3HS5 A;  4LJJ A;  1PGE A;  4Z0L A;  3ERI A;  4Y55 A;  1IGX A;  1IGZ A;  3N8Z A;  5GLS A;  4KVK A;  4OEK A;  4RRX A;  3QF1 A;  4COX A;  5JVY A;  5FIW C;  2PT3 A;  2OYU P;  4N7A A;  1CVU A;  3Q7D A;  3KK6 A;  5HPW A;  4C1M C;  4RUT A;  2EHA A;  5IKV A;  4RRZ A;  3GC1 A;  3R5Q A;  3NTG A;  3LN1 A;  4PNX A;  4DL1 C;  3I6N A;  4RRY A;  3R4X A;  2Z5Z A;  1PRH A;  1CQE A;  1MYP C;  3ERH A;  4PH9 A;  3QH0 A;  4FM5 A;  5FF1 A;  4KVJ A;  3RR3 A;  1DDX A;  3R55 A;  4O1Z A;  3SXV A;  1Q4G A;  1EQG A;  3QL6 A;  4KVL A;  3V6Q A;  6COX A;  3GCK A;  2AYL A;  3PY4 A;  3R5O A;  3FAQ A;  1FE2 A;  4HHR A;  4MSF A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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