1MO8A

Atpase
Total Genus 29
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
29
sequence length
213
structure length
213
Chain Sequence
QNPMTVAHMWFDNQIHEADTTENQSGVSFDKTSATWFALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIEVCCGSVMEMREKYTKIVEIPFNSTNKYQLSIHKNPNASEPKHLLVMKGAPERILDRCSSILLHGKEQPLDEELKDAFQNAYLELGGLGERVLGFCHLLLPDEQFPEGFQFDTDEVNFPVDNLCFVGLISMIDPP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords Sodium/Potassium-Transporting ATPase alpha-1
publication title ATP-induced conformational changes of the nucleotide-binding domain of Na,K-ATPase
pubmed doi rcsb
source organism Rattus norvegicus
total genus 29
structure length 213
sequence length 213
ec nomenclature ec 7.2.2.13: Na(+)/K(+)-exchanging ATPase.
pdb deposition date 2002-09-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF13246 Cation_ATPase Cation transport ATPase (P-type)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1110.10 Alpha Beta 3-Layer(aba) Sandwich Calcium-transporting ATPase, cytoplasmic domain N Calcium-transporting ATPase, cytoplasmic domain N 1mo8A00
4KYTA 5AW6A 4BYGA 4BEWA 5AVQA 1T5SA 3J7TA 3B9RA 2A29A 3BA6A 2KMXA 1IWOA 2EARA 5AVXA 3GWIA 2OA0A 5AVRA 2ZBEA 4XE5A 2EAUA 3A3YA 5AW2A 5AVUA 5AVVA 3N5KA 2YJ5A 4BBJA 3AR2A 1SVJA 1U7QA 3NAMA 3AR5A 5A3SA 4YCNA 1XP5A 3KDPA 3FPBA 5AW5A 5AW3A 1WPGA 3W5DA 3WGVA 1T5TA 5A3RA 2C8LA 3RFUA 3AR3A 3NANA 2YJ6A 3AR4A 5AVTA 2EATA 2DQSA 3AR7A 5AW9A 2YJ3A 3AR8A 3N8GA 4XOUA 3SKXA 4Y3UA 2ZBDA 3W5AA 2ARFA 2KMVA 5AW1A 5A3QA 3B9BA 3FPSA 4RETA 1SU4A 4UU0A 3TLMA 2A00A 3A1EA 2B8EA 4YCMA 3AR6A 5AVYA 3W5BA 5AVSA 1MO8A 1MO7A 2ZBGA 3A1CA 4RESA 2IYEA 4YCLA 5AW8A 3W5CA 4UU1A 5AVWA 2BY4A 5AW0A 2AGVA 3AR9A 5AVZA 3WGUA 2ZBFA 4J2TA 2YFYA 4H1WA 3B8EA 4BEVA 2YJ4A 4HYTA 2ZXEA 1Q3IA 4UMVA 2C9MA 2O9JA 1VFPA 2C88A 3A1DA 3FGOA 3NALA 5AW7A 4NABA 5AW4A 2C8KA 3SKYA
chains in the Genus database with same CATH superfamily
4KYTA 5AW6A 4BYGA 4BEWA 5AVQA 1T5SA 3J7TA 3B9RA 2A29A 3BA6A 2KMXA 1IWOA 2EARA 5AVXA 3GWIA 2OA0A 5AVRA 2ZBEA 4XE5A 2EAUA 3A3YA 5AW2A 5AVUA 5AVVA 3N5KA 2YJ5A 4BBJA 3AR2A 1SVJA 1U7QA 3NAMA 3AR5A 5A3SA 4YCNA 1XP5A 3KDPA 3FPBA 5AW5A 5AW3A 1WPGA 3W5DA 3WGVA 1T5TA 5A3RA 2C8LA 3RFUA 3AR3A 3NANA 2YJ6A 3AR4A 5AVTA 2EATA 2DQSA 3AR7A 5AW9A 2YJ3A 3AR8A 3N8GA 4XOUA 3SKXA 4Y3UA 2ZBDA 3W5AA 2ARFA 2KMVA 5AW1A 5A3QA 3B9BA 3FPSA 4RETA 1SU4A 4UU0A 3TLMA 2A00A 3A1EA 2B8EA 4YCMA 3AR6A 5AVYA 3W5BA 5AVSA 1MO8A 1MO7A 2ZBGA 3A1CA 4RESA 2IYEA 4YCLA 5AW8A 3W5CA 4UU1A 5AVWA 2BY4A 5AW0A 2AGVA 3AR9A 5AVZA 3WGUA 2ZBFA 4J2TA 2YFYA 4H1WA 3B8EA 4BEVA 2YJ4A 4HYTA 2ZXEA 1Q3IA 4UMVA 2C9MA 2O9JA 1VFPA 2C88A 3A1DA 3FGOA 3NALA 5AW7A 4NABA 5AW4A 2C8KA 3SKYA
chains in the Genus database with same CATH topology
4KYTA 5AW6A 4BYGA 4BEWA 5AVQA 1T5SA 3J7TA 3B9RA 2A29A 3BA6A 2KMXA 1IWOA 2EARA 5AVXA 3GWIA 2OA0A 5AVRA 2ZBEA 4XE5A 2EAUA 3A3YA 5AW2A 5AVUA 5AVVA 3N5KA 2YJ5A 4BBJA 3AR2A 1SVJA 1U7QA 3NAMA 3AR5A 5A3SA 4YCNA 1XP5A 3KDPA 3FPBA 5AW5A 5AW3A 1WPGA 3W5DA 3WGVA 1T5TA 5A3RA 2C8LA 3RFUA 3AR3A 3NANA 2YJ6A 3AR4A 5AVTA 2EATA 2DQSA 3AR7A 5AW9A 2YJ3A 3AR8A 3N8GA 4XOUA 3SKXA 4Y3UA 2ZBDA 3W5AA 2ARFA 2KMVA 5AW1A 5A3QA 3B9BA 3FPSA 4RETA 1SU4A 4UU0A 3TLMA 2A00A 3A1EA 2B8EA 4YCMA 3AR6A 5AVYA 3W5BA 5AVSA 1MO8A 1MO7A 2ZBGA 3A1CA 4RESA 2IYEA 4YCLA 5AW8A 3W5CA 4UU1A 5AVWA 2BY4A 5AW0A 2AGVA 3AR9A 5AVZA 3WGUA 2ZBFA 4J2TA 2YFYA 4H1WA 3B8EA 4BEVA 2YJ4A 4HYTA 2ZXEA 1Q3IA 4UMVA 2C9MA 2O9JA 1VFPA 2C88A 3A1DA 3FGOA 3NALA 5AW7A 4NABA 5AW4A 2C8KA 3SKYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4KYT A;  5AW6 A;  4BYG A;  4BEW A;  5AVQ A;  1T5S A;  3J7T A;  3B9R A;  2A29 A;  3BA6 A;  2KMX A;  1IWO A;  2EAR A;  5AVX A;  3GWI A;  2OA0 A;  5AVR A;  2ZBE A;  4XE5 A;  2EAU A;  3A3Y A;  5AW2 A;  5AVU A;  5AVV A;  3N5K A;  2YJ5 A;  4BBJ A;  3AR2 A;  1SVJ A;  1U7Q A;  3NAM A;  3AR5 A;  5A3S A;  4YCN A;  1XP5 A;  3KDP A;  3FPB A;  5AW5 A;  5AW3 A;  1WPG A;  3W5D A;  3WGV A;  1T5T A;  5A3R A;  2C8L A;  3RFU A;  3AR3 A;  3NAN A;  2YJ6 A;  3AR4 A;  5AVT A;  2EAT A;  2DQS A;  3AR7 A;  5AW9 A;  2YJ3 A;  3AR8 A;  3N8G A;  4XOU A;  3SKX A;  4Y3U A;  2ZBD A;  3W5A A;  2ARF A;  2KMV A;  5AW1 A;  5A3Q A;  3B9B A;  3FPS A;  4RET A;  1SU4 A;  4UU0 A;  3TLM A;  2A00 A;  3A1E A;  2B8E A;  4YCM A;  3AR6 A;  5AVY A;  3W5B A;  5AVS A;  1MO8 A;  1MO7 A;  2ZBG A;  3A1C A;  4RES A;  2IYE A;  4YCL A;  5AW8 A;  3W5C A;  4UU1 A;  5AVW A;  2BY4 A;  5AW0 A;  2AGV A;  3AR9 A;  5AVZ A;  3WGU A;  2ZBF A;  4J2T A;  2YFY A;  4H1W A;  3B8E A;  4BEV A;  2YJ4 A;  4HYT A;  2ZXE A;  1Q3I A;  4UMV A;  2C9M A;  2O9J A;  1VFP A;  2C88 A;  3A1D A;  3FGO A;  3NAL A;  5AW7 A;  4NAB A;  5AW4 A;  2C8K A;  3SKY A; 
#chains in the Genus database with same CATH topology
 4KYT A;  5AW6 A;  4BYG A;  4BEW A;  5AVQ A;  1T5S A;  3J7T A;  3B9R A;  2A29 A;  3BA6 A;  2KMX A;  1IWO A;  2EAR A;  5AVX A;  3GWI A;  2OA0 A;  5AVR A;  2ZBE A;  4XE5 A;  2EAU A;  3A3Y A;  5AW2 A;  5AVU A;  5AVV A;  3N5K A;  2YJ5 A;  4BBJ A;  3AR2 A;  1SVJ A;  1U7Q A;  3NAM A;  3AR5 A;  5A3S A;  4YCN A;  1XP5 A;  3KDP A;  3FPB A;  5AW5 A;  5AW3 A;  1WPG A;  3W5D A;  3WGV A;  1T5T A;  5A3R A;  2C8L A;  3RFU A;  3AR3 A;  3NAN A;  2YJ6 A;  3AR4 A;  5AVT A;  2EAT A;  2DQS A;  3AR7 A;  5AW9 A;  2YJ3 A;  3AR8 A;  3N8G A;  4XOU A;  3SKX A;  4Y3U A;  2ZBD A;  3W5A A;  2ARF A;  2KMV A;  5AW1 A;  5A3Q A;  3B9B A;  3FPS A;  4RET A;  1SU4 A;  4UU0 A;  3TLM A;  2A00 A;  3A1E A;  2B8E A;  4YCM A;  3AR6 A;  5AVY A;  3W5B A;  5AVS A;  1MO8 A;  1MO7 A;  2ZBG A;  3A1C A;  4RES A;  2IYE A;  4YCL A;  5AW8 A;  3W5C A;  4UU1 A;  5AVW A;  2BY4 A;  5AW0 A;  2AGV A;  3AR9 A;  5AVZ A;  3WGU A;  2ZBF A;  4J2T A;  2YFY A;  4H1W A;  3B8E A;  4BEV A;  2YJ4 A;  4HYT A;  2ZXE A;  1Q3I A;  4UMV A;  2C9M A;  2O9J A;  1VFP A;  2C88 A;  3A1D A;  3FGO A;  3NAL A;  5AW7 A;  4NAB A;  5AW4 A;  2C8K A;  3SKY A; 
#chains in the Genus database with same CATH homology
 4KYT A;  5AW6 A;  4BYG A;  4BEW A;  5AVQ A;  1T5S A;  3J7T A;  3B9R A;  2A29 A;  3BA6 A;  2KMX A;  1IWO A;  2EAR A;  5AVX A;  3GWI A;  2OA0 A;  5AVR A;  2ZBE A;  4XE5 A;  2EAU A;  3A3Y A;  5AW2 A;  5AVU A;  5AVV A;  3N5K A;  2YJ5 A;  4BBJ A;  3AR2 A;  1SVJ A;  1U7Q A;  3NAM A;  3AR5 A;  5A3S A;  4YCN A;  1XP5 A;  3KDP A;  3FPB A;  5AW5 A;  5AW3 A;  1WPG A;  3W5D A;  3WGV A;  1T5T A;  5A3R A;  2C8L A;  3RFU A;  3AR3 A;  3NAN A;  2YJ6 A;  3AR4 A;  5AVT A;  2EAT A;  2DQS A;  3AR7 A;  5AW9 A;  2YJ3 A;  3AR8 A;  3N8G A;  4XOU A;  3SKX A;  4Y3U A;  2ZBD A;  3W5A A;  2ARF A;  2KMV A;  5AW1 A;  5A3Q A;  3B9B A;  3FPS A;  4RET A;  1SU4 A;  4UU0 A;  3TLM A;  2A00 A;  3A1E A;  2B8E A;  4YCM A;  3AR6 A;  5AVY A;  3W5B A;  5AVS A;  1MO8 A;  1MO7 A;  2ZBG A;  3A1C A;  4RES A;  2IYE A;  4YCL A;  5AW8 A;  3W5C A;  4UU1 A;  5AVW A;  2BY4 A;  5AW0 A;  2AGV A;  3AR9 A;  5AVZ A;  3WGU A;  2ZBF A;  4J2T A;  2YFY A;  4H1W A;  3B8E A;  4BEV A;  2YJ4 A;  4HYT A;  2ZXE A;  1Q3I A;  4UMV A;  2C9M A;  2O9J A;  1VFP A;  2C88 A;  3A1D A;  3FGO A;  3NAL A;  5AW7 A;  4NAB A;  5AW4 A;  2C8K A;  3SKY A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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