1MU4A

Crystal structure at 1.8 angstroms of the bacillus subtilis catabolite repression histidine containing protein (crh)
Total Genus 18
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
18
sequence length
86
structure length
86
Chain Sequence
MVQQKVEVRLKTGLQARPAALFVQEANRFTSDVFLEKDGKKVNAKSIMGLMSLAVSTGTEVTLIAQGEDEQEALEKLAAYVQEEVL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
molecule keywords HPr-like protein crh
publication title Dimerization of Crh by reversible 3D Domain Swapping Induces Structural Adjustments to its monomeric homologue HPR
pubmed doi rcsb
source organism Bacillus subtilis
total genus 18
structure length 86
sequence length 86
chains with identical sequence B
ec nomenclature
pdb deposition date 2002-09-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00381 PTS-HPr PTS HPr component phosphorylation site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1340.10 Alpha Beta 2-Layer Sandwich Histidine-containing Protein; Chain: A; HPr-like 1mu4A00
2RLZA 3CCDA 1Y4YA 2LRKD 3EZEB 1RZRL 1KKLH 5T1OA 3OQMD 3OQND 1GGRB 1K1CA 2FEPS 1SPHA 2JELP 1PCHA 3IHSA 3LNWA 3EZBB 1QR5A 1MO1A 2LRLD 1PTFA 3LFGA 3EZAB 1TXEA 2NZUL 2HIDA 3OQOD 5T1NA 2HPRA 1JEMA 1MO1B 2NZVL 1J6TB 5T17A 1MU4A 3LE1A 1KKMH 1Y51A 3LE3A 2OENL 1ZVVJ 1CM3A 1VRCC 1Y50A 1POHA 4XWJB 1OPDA 1QFRA 1CM2A 3LE5A 1KA5A 1HDNA 1PFHA 2XDFC 2AK7A 1FU0A
chains in the Genus database with same CATH superfamily
2RLZA 3CCDA 1Y4YA 2LRKD 3EZEB 1RZRL 1KKLH 5T1OA 3OQMD 3OQND 1GGRB 1K1CA 1J5YA 2FEPS 1SPHA 2JELP 1PCHA 3IHSA 3LNWA 3EZBB 1QR5A 1MO1A 2LRLD 1PTFA 3LFGA 3EZAB 1TXEA 2NZUL 2HIDA 3OQOD 5T1NA 2HPRA 1JEMA 1MO1B 2NZVL 1J6TB 5T17A 1MU4A 3LE1A 1KKMH 1Y51A 3LE3A 2OENL 1ZVVJ 1CM3A 1VRCC 1Y50A 1POHA 4XWJB 1OPDA 1QFRA 1CM2A 3LE5A 1KA5A 1HDNA 1PFHA 2XDFC 2AK7A 1FU0A
chains in the Genus database with same CATH topology
2RLZA 3CCDA 1Y4YA 2LRKD 3EZEB 1RZRL 1KKLH 5T1OA 3OQMD 3OQND 1GGRB 1K1CA 2FEPS 1SPHA 2JELP 1PCHA 3IHSA 3LNWA 3EZBB 1QR5A 1MO1A 2LRLD 1PTFA 3LFGA 3EZAB 1TXEA 2NZUL 2HIDA 3OQOD 5T1NA 2HPRA 1JEMA 1MO1B 2NZVL 1J6TB 5T17A 1MU4A 3LE1A 1KKMH 1Y51A 3LE3A 2OENL 1ZVVJ 1CM3A 1VRCC 1Y50A 1POHA 4XWJB 1OPDA 1QFRA 1CM2A 3LE5A 1KA5A 1HDNA 1PFHA 2XDFC 2AK7A 1FU0A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2RLZ A;  3CCD A;  1Y4Y A;  2LRK D;  3EZE B;  1RZR L;  1KKL H;  5T1O A;  3OQM D;  3OQN D;  1GGR B;  1K1C A;  2FEP S;  1SPH A;  2JEL P;  1PCH A;  3IHS A;  3LNW A;  3EZB B;  1QR5 A;  1MO1 A;  2LRL D;  1PTF A;  3LFG A;  3EZA B;  1TXE A;  2NZU L;  2HID A;  3OQO D;  5T1N A;  2HPR A;  1JEM A;  1MO1 B;  2NZV L;  1J6T B;  5T17 A;  1MU4 A;  3LE1 A;  1KKM H;  1Y51 A;  3LE3 A;  2OEN L;  1ZVV J;  1CM3 A;  1VRC C;  1Y50 A;  1POH A;  4XWJ B;  1OPD A;  1QFR A;  1CM2 A;  3LE5 A;  1KA5 A;  1HDN A;  1PFH A;  2XDF C;  2AK7 A;  1FU0 A; 
#chains in the Genus database with same CATH topology
 2RLZ A;  3CCD A;  1Y4Y A;  2LRK D;  3EZE B;  1RZR L;  1KKL H;  5T1O A;  3OQM D;  3OQN D;  1GGR B;  1K1C A;  1J5Y A;  2FEP S;  1SPH A;  2JEL P;  1PCH A;  3IHS A;  3LNW A;  3EZB B;  1QR5 A;  1MO1 A;  2LRL D;  1PTF A;  3LFG A;  3EZA B;  1TXE A;  2NZU L;  2HID A;  3OQO D;  5T1N A;  2HPR A;  1JEM A;  1MO1 B;  2NZV L;  1J6T B;  5T17 A;  1MU4 A;  3LE1 A;  1KKM H;  1Y51 A;  3LE3 A;  2OEN L;  1ZVV J;  1CM3 A;  1VRC C;  1Y50 A;  1POH A;  4XWJ B;  1OPD A;  1QFR A;  1CM2 A;  3LE5 A;  1KA5 A;  1HDN A;  1PFH A;  2XDF C;  2AK7 A;  1FU0 A; 
#chains in the Genus database with same CATH homology
 2RLZ A;  3CCD A;  1Y4Y A;  2LRK D;  3EZE B;  1RZR L;  1KKL H;  5T1O A;  3OQM D;  3OQN D;  1GGR B;  1K1C A;  2FEP S;  1SPH A;  2JEL P;  1PCH A;  3IHS A;  3LNW A;  3EZB B;  1QR5 A;  1MO1 A;  2LRL D;  1PTF A;  3LFG A;  3EZA B;  1TXE A;  2NZU L;  2HID A;  3OQO D;  5T1N A;  2HPR A;  1JEM A;  1MO1 B;  2NZV L;  1J6T B;  5T17 A;  1MU4 A;  3LE1 A;  1KKM H;  1Y51 A;  3LE3 A;  2OEN L;  1ZVV J;  1CM3 A;  1VRC C;  1Y50 A;  1POH A;  4XWJ B;  1OPD A;  1QFR A;  1CM2 A;  3LE5 A;  1KA5 A;  1HDN A;  1PFH A;  2XDF C;  2AK7 A;  1FU0 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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