1MUNA

Catalytic domain of muty from escherichia coli d138n mutant
Total Genus 74
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
74
sequence length
225
structure length
225
Chain Sequence
MQASQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILNGNVKRVLARCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNGCIAAANNSWALYPGKKPK
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords ADENINE GLYCOSYLASE
publication title MutY catalytic core, mutant and bound adenine structures define specificity for DNA repair enzyme superfamily.
pubmed doi rcsb
source organism Escherichia coli
molecule tags Dna repair
total genus 74
structure length 225
sequence length 225
ec nomenclature ec 3.2.2.31: Adenine glycosylase.
pdb deposition date 1998-08-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00633 HHH Helix-hairpin-helix motif
A PF00730 HhH-GPD HhH-GPD superfamily base excision DNA repair protein
A PF10576 EndIII_4Fe-2S Iron-sulfur binding domain of endonuclease III
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.340.30 Mainly Alpha Orthogonal Bundle Endonuclease III; domain 1 Hypothetical protein; domain 2 1munA02
1.10.1670.10 Mainly Alpha Orthogonal Bundle Endonuclease Iii, domain 2 Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) 1munA01
4E9GA 1ORNA 4AI5A 2JHNA 4B21A 3CVTA 3OH6A 3FSPA 1LWWA 1WEGA 2XHIA 1P7MA 2YG9A 1N39A 2OFIA 4UNFA 3IH7A 1MUYA 1LWYA 1XQPA 1P59A 4EW4A 1KG6A 4UOBA 3CWUA 4OFAA 3CWAA 4B22A 4AIAA 1YQKA 1KEAA 4B23A 1PVSA 1YQMA 2NOIA 4E9HA 1WEFA 2OFKA 3FHFA 1PU6A 2JG6A 4EA4A 3OH9A 1MUDA 4EVVA 1XG7A 1KG4A 1VRLA 1MUNA 1RRSA 3KTUA 3CWSA 1XQOA 4YPHA 3CVSA 1KG3A 3OGDA 1EBMA 5KN9A 3F0ZA 4EW0A 1LWVA 3N0UA 1RRQA 4EJZA 3G0QA 5DPKA 1KG2A 3N5NX 2JHJA 2NOBA 1N3CA 4OFHA 3KNTA 3CWTA 4E9EA 3IHOA 2H56A 4OFEA 5AN4A 4YPRA 1NGNA 5CHZA 3D4VA 1YQRA 2NOFA 1NKUA 4EA5A 4HSBA 1YQLA 2ABKA 3S6IA 4B24A 1KG5A 4AI4A 1KQJA 1MPGA 2NOEA 1ORPA 4EJYA 3I0WA 3FHGA 4PIIA 2NOLA 4DK9A 3F10A 1KG7A 2I5WA 1WEIA 1KO9A 2NOHA 3I0XA 3CW7A 4E9FA 1PU8A 1DIZA 5KN8A 1M3HA 2NOZA 2YG8A 1HU0A 1N3AA 4YOQA 1FN7A 1M3QA 1LMZA 1PU7A
chains in the Genus database with same CATH superfamily
4BE2A 2W04A 4E9GA 1ORNA 4AI5A 5FRNA 2JHNA 4B21A 4E7LA 3CVTA 3LCNA 3OH6A 3FSPA 1LWWA 4ZTJA 5FRMA 1WEGA 3OY9A 2XHIA 1P7MA 2YG9A 1N39A 2OFIA 4UNFA 3OYMA 3IH7A 1MUYA 4E7KA 1LWYA 3OYKA 3OYDA 1XQPA 4BDZA 1P59A 4EW4A 1KG6A 4UOBA 3CWUA 3OS0A 4OFAA 4BE1A 3OYNA 3CWAA 4B22A 4AIAA 1YQKA 1KEAA 4B23A 1PVSA 4ZTFA 1YQMA 2NOIA 4E9HA 1WEFA 2OFKA 3FHFA 1PU6A 3L2VA 3OYAA 2JG6A 4EA4A 3OYGA 3OH9A 1MUDA 4EVVA 3L2RA 1XG7A 4IKFA 1KG4A 1VRLA 1MUNA 3S3NA 1RRSA 3KTUA 3CWSA 1XQOA 4YPHA 3CVSA 1KG3A 2V75A 3OGDA 1EBMA 5KN9A 3F0ZA 4EW0A 1LWVA 3N0UA 2W03A 1U84A 1RRQA 3OYJA 4BE0A 4EJZA 3G0QA 5DPKA 1KG2A 3N5NX 2JHJA 2NOBA 1N3CA 4OFHA 3KNTA 3S3OA 3OYCA 3CWTA 3L2WA 4E9EA 3IHOA 2H56A 4OFEA 4E7IA 3VW4A 5AN4A 4YPRA 1NGNA 5CHZA 4E7JA 3D4VA 1YQRA 2NOFA 1NKUA 4EA5A 3OYLA 4HSBA 1YQLA 3S3MA 3OYIA 2ABKA 4BDYA 3S6IA 3OYEA 4E7HA 4B24A 1KG5A 3R2XC 4AI4A 1KQJA 1MPGA 2NOEA 1ORPA 4EJYA 3I0WA 3FHGA 4PIIA 3OYFA 2NOLA 3OYBA 4DK9A 3F10A 1KG7A 3OS1A 4BACA 2JPSA 2I5WA 1WEIA 1KO9A 2NOHA 3I0XA 3CW7A 5FROA 4E9FA 1PU8A 1DIZA 5KN8A 1M3HA 2NOZA 3OYHA 3L2UA 2YG8A 1HU0A 3OS2A 1N3AA 4NZGA 4YOQA 1FN7A 1M3QA 1LMZA 3NNQA 3L2QA 1PU7A
chains in the Genus database with same CATH topology
4E9GA 1ORNA 4AI5A 2JHNA 4B21A 3CVTA 3OH6A 3FSPA 1LWWA 1WEGA 2XHIA 1P7MA 2YG9A 1N39A 2OFIA 4UNFA 3IH7A 1MUYA 1LWYA 1XQPA 1P59A 4EW4A 1KG6A 4UOBA 3CWUA 4OFAA 3CWAA 4B22A 4AIAA 1YQKA 1KEAA 4B23A 1PVSA 1YQMA 2NOIA 4E9HA 1WEFA 2OFKA 3FHFA 1PU6A 2JG6A 4EA4A 3OH9A 1MUDA 4EVVA 1XG7A 1KG4A 1VRLA 1MUNA 1RRSA 3KTUA 3CWSA 1XQOA 4YPHA 3CVSA 1KG3A 3OGDA 1EBMA 5KN9A 3F0ZA 4EW0A 1LWVA 3N0UA 1RRQA 4EJZA 3G0QA 5DPKA 1KG2A 3N5NX 2JHJA 2NOBA 1N3CA 4OFHA 3KNTA 3CWTA 4E9EA 3IHOA 2H56A 4OFEA 5AN4A 4YPRA 1NGNA 5CHZA 3D4VA 1YQRA 2NOFA 1NKUA 4EA5A 4HSBA 1YQLA 2ABKA 3S6IA 4B24A 1KG5A 4AI4A 1KQJA 1MPGA 2NOEA 1ORPA 4EJYA 3I0WA 3FHGA 4PIIA 2NOLA 4DK9A 3F10A 1KG7A 2I5WA 1WEIA 1KO9A 2NOHA 3I0XA 3CW7A 4E9FA 1PU8A 1DIZA 5KN8A 1M3HA 2NOZA 2YG8A 1HU0A 1N3AA 4YOQA 1FN7A 1M3QA 1LMZA 1PU7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4E9G A;  1ORN A;  4AI5 A;  2JHN A;  4B21 A;  3CVT A;  3OH6 A;  3FSP A;  1LWW A;  1WEG A;  2XHI A;  1P7M A;  2YG9 A;  1N39 A;  2OFI A;  4UNF A;  3IH7 A;  1MUY A;  1LWY A;  1XQP A;  1P59 A;  4EW4 A;  1KG6 A;  4UOB A;  3CWU A;  4OFA A;  3CWA A;  4B22 A;  4AIA A;  1YQK A;  1KEA A;  4B23 A;  1PVS A;  1YQM A;  2NOI A;  4E9H A;  1WEF A;  2OFK A;  3FHF A;  1PU6 A;  2JG6 A;  4EA4 A;  3OH9 A;  1MUD A;  4EVV A;  1XG7 A;  1KG4 A;  1VRL A;  1MUN A;  1RRS A;  3KTU A;  3CWS A;  1XQO A;  4YPH A;  3CVS A;  1KG3 A;  3OGD A;  1EBM A;  5KN9 A;  3F0Z A;  4EW0 A;  1LWV A;  3N0U A;  1RRQ A;  4EJZ A;  3G0Q A;  5DPK A;  1KG2 A;  3N5N X;  2JHJ A;  2NOB A;  1N3C A;  4OFH A;  3KNT A;  3CWT A;  4E9E A;  3IHO A;  2H56 A;  4OFE A;  5AN4 A;  4YPR A;  1NGN A;  5CHZ A;  3D4V A;  1YQR A;  2NOF A;  1NKU A;  4EA5 A;  4HSB A;  1YQL A;  2ABK A;  3S6I A;  4B24 A;  1KG5 A;  4AI4 A;  1KQJ A;  1MPG A;  2NOE A;  1ORP A;  4EJY A;  3I0W A;  3FHG A;  4PII A;  2NOL A;  4DK9 A;  3F10 A;  1KG7 A;  2I5W A;  1WEI A;  1KO9 A;  2NOH A;  3I0X A;  3CW7 A;  4E9F A;  1PU8 A;  1DIZ A;  5KN8 A;  1M3H A;  2NOZ A;  2YG8 A;  1HU0 A;  1N3A A;  4YOQ A;  1FN7 A;  1M3Q A;  1LMZ A;  1PU7 A; 
#chains in the Genus database with same CATH topology
 4BE2 A;  2W04 A;  4E9G A;  1ORN A;  4AI5 A;  5FRN A;  2JHN A;  4B21 A;  4E7L A;  3CVT A;  3LCN A;  3OH6 A;  3FSP A;  1LWW A;  4ZTJ A;  5FRM A;  1WEG A;  3OY9 A;  2XHI A;  1P7M A;  2YG9 A;  1N39 A;  2OFI A;  4UNF A;  3OYM A;  3IH7 A;  1MUY A;  4E7K A;  1LWY A;  3OYK A;  3OYD A;  1XQP A;  4BDZ A;  1P59 A;  4EW4 A;  1KG6 A;  4UOB A;  3CWU A;  3OS0 A;  4OFA A;  4BE1 A;  3OYN A;  3CWA A;  4B22 A;  4AIA A;  1YQK A;  1KEA A;  4B23 A;  1PVS A;  4ZTF A;  1YQM A;  2NOI A;  4E9H A;  1WEF A;  2OFK A;  3FHF A;  1PU6 A;  3L2V A;  3OYA A;  2JG6 A;  4EA4 A;  3OYG A;  3OH9 A;  1MUD A;  4EVV A;  3L2R A;  1XG7 A;  4IKF A;  1KG4 A;  1VRL A;  1MUN A;  3S3N A;  1RRS A;  3KTU A;  3CWS A;  1XQO A;  4YPH A;  3CVS A;  1KG3 A;  2V75 A;  3OGD A;  1EBM A;  5KN9 A;  3F0Z A;  4EW0 A;  1LWV A;  3N0U A;  2W03 A;  1U84 A;  1RRQ A;  3OYJ A;  4BE0 A;  4EJZ A;  3G0Q A;  5DPK A;  1KG2 A;  3N5N X;  2JHJ A;  2NOB A;  1N3C A;  4OFH A;  3KNT A;  3S3O A;  3OYC A;  3CWT A;  3L2W A;  4E9E A;  3IHO A;  2H56 A;  4OFE A;  4E7I A;  3VW4 A;  5AN4 A;  4YPR A;  1NGN A;  5CHZ A;  4E7J A;  3D4V A;  1YQR A;  2NOF A;  1NKU A;  4EA5 A;  3OYL A;  4HSB A;  1YQL A;  3S3M A;  3OYI A;  2ABK A;  4BDY A;  3S6I A;  3OYE A;  4E7H A;  4B24 A;  1KG5 A;  3R2X C;  4AI4 A;  1KQJ A;  1MPG A;  2NOE A;  1ORP A;  4EJY A;  3I0W A;  3FHG A;  4PII A;  3OYF A;  2NOL A;  3OYB A;  4DK9 A;  3F10 A;  1KG7 A;  3OS1 A;  4BAC A;  2JPS A;  2I5W A;  1WEI A;  1KO9 A;  2NOH A;  3I0X A;  3CW7 A;  5FRO A;  4E9F A;  1PU8 A;  1DIZ A;  5KN8 A;  1M3H A;  2NOZ A;  3OYH A;  3L2U A;  2YG8 A;  1HU0 A;  3OS2 A;  1N3A A;  4NZG A;  4YOQ A;  1FN7 A;  1M3Q A;  1LMZ A;  3NNQ A;  3L2Q A;  1PU7 A; 
#chains in the Genus database with same CATH homology
 4E9G A;  1ORN A;  4AI5 A;  2JHN A;  4B21 A;  3CVT A;  3OH6 A;  3FSP A;  1LWW A;  1WEG A;  2XHI A;  1P7M A;  2YG9 A;  1N39 A;  2OFI A;  4UNF A;  3IH7 A;  1MUY A;  1LWY A;  1XQP A;  1P59 A;  4EW4 A;  1KG6 A;  4UOB A;  3CWU A;  4OFA A;  3CWA A;  4B22 A;  4AIA A;  1YQK A;  1KEA A;  4B23 A;  1PVS A;  1YQM A;  2NOI A;  4E9H A;  1WEF A;  2OFK A;  3FHF A;  1PU6 A;  2JG6 A;  4EA4 A;  3OH9 A;  1MUD A;  4EVV A;  1XG7 A;  1KG4 A;  1VRL A;  1MUN A;  1RRS A;  3KTU A;  3CWS A;  1XQO A;  4YPH A;  3CVS A;  1KG3 A;  3OGD A;  1EBM A;  5KN9 A;  3F0Z A;  4EW0 A;  1LWV A;  3N0U A;  1RRQ A;  4EJZ A;  3G0Q A;  5DPK A;  1KG2 A;  3N5N X;  2JHJ A;  2NOB A;  1N3C A;  4OFH A;  3KNT A;  3CWT A;  4E9E A;  3IHO A;  2H56 A;  4OFE A;  5AN4 A;  4YPR A;  1NGN A;  5CHZ A;  3D4V A;  1YQR A;  2NOF A;  1NKU A;  4EA5 A;  4HSB A;  1YQL A;  2ABK A;  3S6I A;  4B24 A;  1KG5 A;  4AI4 A;  1KQJ A;  1MPG A;  2NOE A;  1ORP A;  4EJY A;  3I0W A;  3FHG A;  4PII A;  2NOL A;  4DK9 A;  3F10 A;  1KG7 A;  2I5W A;  1WEI A;  1KO9 A;  2NOH A;  3I0X A;  3CW7 A;  4E9F A;  1PU8 A;  1DIZ A;  5KN8 A;  1M3H A;  2NOZ A;  2YG8 A;  1HU0 A;  1N3A A;  4YOQ A;  1FN7 A;  1M3Q A;  1LMZ A;  1PU7 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...