1NVIE

Orthorhombic crystal form of molybdopterin synthase
Total Genus 39
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
39
sequence length
149
structure length
142
Chain Sequence
AETKIVVGPQPFSVGEEYPWLAERDEDGAVVTFTGKVRVNALTLEHYPGMTEKALAEIVDEARNRWPLGRVTVIHRIGELWPGDEIVFVGVTSAHRSSAFEAGQFIMDYLKTRAPFWKREATPEGDRWVEARESDQQAAKRW
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Molybdopterin converting factor subunit 1
publication title Structural Studies of Molybdopterin Synthase Provide Insights into its Catalytic Mechanism
pubmed doi rcsb
source organism Escherichia coli
total genus 39
structure length 142
sequence length 149
ec nomenclature ec 2.8.1.12: Molybdopterin synthase.
pdb deposition date 2003-02-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
E PF02391 MoaE MoaE protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.1170.40 Alpha Beta Alpha-Beta Complex Aldehyde Oxidoreductase; domain 3 Molybdopterin biosynthesis MoaE subunit 1nviE00
2QIEA 4AP8A 5MPOC 3RPFA 2Q5WE 1FMAE 1NVJA 3BIIE 2OMDA 1FM0E 2WP4A 1NVIE
chains in the Genus database with same CATH superfamily
2DSJA 2JBMA 3NVYC 3CF5J 1YTDA 1YTKA 1SB3A 1KQSH 5MLCO 1QAPA 3CCUH 1O4UA 4LHMA 5AN9F 1QVGH 4KWWA 3RPFA 4C80A 4X46A 1FMAE 5HUPA 4UY8M 1JRPB 1FFUB 3SR6C 3CCVH 5EY3A 2QIEA 2TPTA 2B7NA 5AYYA 2QA4H 1NVJA 1N61B 1FIQC 1QPNA 1QPRA 1V97A 4WF9J 3PIOJ 5AYXA 4US8A 3GNNA 3CC4H 3CCQH 4EAFA 5GAGN 1VLBA 2W55B 3NRZC 1FM0E 2W3SB 5AYZA 3H5QA 2ZJRJ 1VQ5H 3OW2H 4GA6A 3G71H 1N60B 3C2OA 1YITH 1VQ4H 3NVWC 3CD6H 4YEKA 2E3TA 4GA5A 2OTLH 1RM6A 1Q81J 3L0GA 2B7QA 4US9A 1Q82J 3NVVC 2WK6A 3G6EH 1NVIE 4IOAJ 1VQLH 1QPQA 1YI2H 4C7ZA 4AP8A 1N63B 2J0FA 5MPOC 1OTPA 1VQPH 1VQ6H 2WK5A 4U67J 3AM9A 1X1OA 1JJ2H 3DLLJ 4USAA 1Y69K 1VQ9H 1VDVA 3NVZC 3L4PA 5GAHN 1N8RJ 3CCMH 3BIIE 3CCEH 1KD1J 1QPOA 5HUOA 3CMEH 3NS1C 3B9JC 1SIJA 3TQVA 4EADA 5GADN 3J7ZM 4WFAJ 4IO9J 2OMDA 3CC2H 4XR5A 3C2RA 1NJIJ 5HL7J 3CMAH 1FFVB 1N5XA 3AN1A 4GA4A 4C7YA 1YJNH 1W2BH 2Q5WE 1K8AJ 1M1KJ 2PA2A 1VQNH 3PAJA 2ZJQJ 4WFBJ 1YJWH 1DGJA 1KC8J 1ZXIB 4KWVA 3CXCH 3ETRC 3CCLH 5DM6J 1WKIA 3WO0A 4ZOHA 1UOUA 5JVGJ 2W54B 3C2VA 4IOCJ 1JROB 1YIJH 4WFNJ 2I14A 1Q7YJ 2ZJPJ 3CCRH 3CCJH 1YHQH 3CC7H 1QVFH 2W3RB 4WCEJ 1YTEA 3FC4A 5HULA 5H1SO 1WYGA 1VQ7H 4YYYA 3WO1A 3EUB4 1VQ8H 3WNZA 2OTJH 1BRWA 1VQMH 2B7PA 1YJ9H 2QEXH 5JVHJ 3C2FA 3CPWH 1AZYA 1FO4A 2WP4A 5EP8A 1Q86J 3PIPJ 3VMMA 3I56H 3AMZA 1N62B 1N5WB 4I9AA 5DM7J 3I55H 1S72H 2I1OA 5GAEN 1VQOH 3C2EA 3FAHA 1M90J 1VQKH 1K73J 1K9MJ 3CCSH 3G4SH
chains in the Genus database with same CATH topology
2QIEA 4AP8A 5MPOC 3RPFA 2Q5WE 1FMAE 1NVJA 3BIIE 2OMDA 1FM0E 2WP4A 1NVIE
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2QIE A;  4AP8 A;  5MPO C;  3RPF A;  2Q5W E;  1FMA E;  1NVJ A;  3BII E;  2OMD A;  1FM0 E;  2WP4 A;  1NVI E; 
#chains in the Genus database with same CATH topology
 2DSJ A;  2JBM A;  3NVY C;  3CF5 J;  1YTD A;  1YTK A;  1SB3 A;  1KQS H;  5MLC O;  1QAP A;  3CCU H;  1O4U A;  4LHM A;  5AN9 F;  1QVG H;  4KWW A;  3RPF A;  4C80 A;  4X46 A;  1FMA E;  5HUP A;  4UY8 M;  1JRP B;  1FFU B;  3SR6 C;  3CCV H;  5EY3 A;  2QIE A;  2TPT A;  2B7N A;  5AYY A;  2QA4 H;  1NVJ A;  1N61 B;  1FIQ C;  1QPN A;  1QPR A;  1V97 A;  4WF9 J;  3PIO J;  5AYX A;  4US8 A;  3GNN A;  3CC4 H;  3CCQ H;  4EAF A;  5GAG N;  1VLB A;  2W55 B;  3NRZ C;  1FM0 E;  2W3S B;  5AYZ A;  3H5Q A;  2ZJR J;  1VQ5 H;  3OW2 H;  4GA6 A;  3G71 H;  1N60 B;  3C2O A;  1YIT H;  1VQ4 H;  3NVW C;  3CD6 H;  4YEK A;  2E3T A;  4GA5 A;  2OTL H;  1RM6 A;  1Q81 J;  3L0G A;  2B7Q A;  4US9 A;  1Q82 J;  3NVV C;  2WK6 A;  3G6E H;  1NVI E;  4IOA J;  1VQL H;  1QPQ A;  1YI2 H;  4C7Z A;  4AP8 A;  1N63 B;  2J0F A;  5MPO C;  1OTP A;  1VQP H;  1VQ6 H;  2WK5 A;  4U67 J;  3AM9 A;  1X1O A;  1JJ2 H;  3DLL J;  4USA A;  1Y69 K;  1VQ9 H;  1VDV A;  3NVZ C;  3L4P A;  5GAH N;  1N8R J;  3CCM H;  3BII E;  3CCE H;  1KD1 J;  1QPO A;  5HUO A;  3CME H;  3NS1 C;  3B9J C;  1SIJ A;  3TQV A;  4EAD A;  5GAD N;  3J7Z M;  4WFA J;  4IO9 J;  2OMD A;  3CC2 H;  4XR5 A;  3C2R A;  1NJI J;  5HL7 J;  3CMA H;  1FFV B;  1N5X A;  3AN1 A;  4GA4 A;  4C7Y A;  1YJN H;  1W2B H;  2Q5W E;  1K8A J;  1M1K J;  2PA2 A;  1VQN H;  3PAJ A;  2ZJQ J;  4WFB J;  1YJW H;  1DGJ A;  1KC8 J;  1ZXI B;  4KWV A;  3CXC H;  3ETR C;  3CCL H;  5DM6 J;  1WKI A;  3WO0 A;  4ZOH A;  1UOU A;  5JVG J;  2W54 B;  3C2V A;  4IOC J;  1JRO B;  1YIJ H;  4WFN J;  2I14 A;  1Q7Y J;  2ZJP J;  3CCR H;  3CCJ H;  1YHQ H;  3CC7 H;  1QVF H;  2W3R B;  4WCE J;  1YTE A;  3FC4 A;  5HUL A;  5H1S O;  1WYG A;  1VQ7 H;  4YYY A;  3WO1 A;  3EUB 4;  1VQ8 H;  3WNZ A;  2OTJ H;  1BRW A;  1VQM H;  2B7P A;  1YJ9 H;  2QEX H;  5JVH J;  3C2F A;  3CPW H;  1AZY A;  1FO4 A;  2WP4 A;  5EP8 A;  1Q86 J;  3PIP J;  3VMM A;  3I56 H;  3AMZ A;  1N62 B;  1N5W B;  4I9A A;  5DM7 J;  3I55 H;  1S72 H;  2I1O A;  5GAE N;  1VQO H;  3C2E A;  3FAH A;  1M90 J;  1VQK H;  1K73 J;  1K9M J;  3CCS H;  3G4S H; 
#chains in the Genus database with same CATH homology
 2QIE A;  4AP8 A;  5MPO C;  3RPF A;  2Q5W E;  1FMA E;  1NVJ A;  3BII E;  2OMD A;  1FM0 E;  2WP4 A;  1NVI E; 
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similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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