1NVJA

Deletion mutant (delta 141) of molybdopterin synthase
Total Genus 34
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
34
sequence length
126
structure length
118
Chain Sequence
AETKIVVGPQPFSVGEEYPWLAERDEDGAVVTFTGKVRNALTLEHYPGMTEKALAEIVDEARNRWPLGRVTVIHRIGELWPGDEIVFVGVTSAHRSSAFEAGQFIMDYLKTRAPFWKR
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Transferase
molecule keywords Molybdopterin converting factor subunit 2
publication title Structural Studies of Molybdopterin Synthase Provide Insights into its Catalytic Mechanism
pubmed doi rcsb
source organism Escherichia coli
total genus 34
structure length 118
sequence length 126
chains with identical sequence B, C, D, E, F
ec nomenclature ec 2.8.1.12: Molybdopterin synthase.
pdb deposition date 2003-02-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02391 MoaE MoaE protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.1170.40 Alpha Beta Alpha-Beta Complex Aldehyde Oxidoreductase; domain 3 Molybdopterin biosynthesis MoaE subunit 1nvjA00
3BIIE 1NVIE 1NVJA 2QIEA 3RPFA 1FM0E 4AP8A 2Q5WE 2WP4A 1FMAE 2OMDA 5MPOC
chains in the Genus database with same CATH superfamily
1FFUB 1SIJA 2QA4H 1YJWH 5HULA 1N61B 1KD1J 3H5QA 4WF9J 4WFNJ 4USAA 1Q7YJ 3L4PA 5DM7J 1Q81J 3GNNA 3DLLJ 3CCSH 1VQOH 1NVIE 2W3SB 1VQ6H 3AM9A 3WO1A 1X1OA 2QEXH 2JBMA 3SR6C 1VQ7H 1K73J 1FIQC 4C80A 3NVWC 1QPRA 4GA6A 1YHQH 3C2RA 1KC8J 3I55H 1M1KJ 1WYGA 1YTDA 4X46A 3NS1C 5GAGN 1KQSH 1YJ9H 1QVGH 4YYYA 5JVHJ 1BRWA 1VDVA 3CXCH 3CD6H 2B7PA 1QPQA 2PA2A 3CC4H 1Y69K 3CMEH 3CCLH 1QVFH 3TQVA 3G6EH 4LHMA 4C7YA 1VQ5H 2OTJH 4YEKA 3FAHA 2J0FA 4EAFA 2OTLH 5AYXA 3VMMA 5JVGJ 3CMAH 3WO0A 1W2BH 4C7ZA 5HL7J 3CPWH 4EADA 3J7ZM 1VQ9H 2ZJRJ 5MLCO 5AYYA 4XR5A 2ZJQJ 2WK5A 2B7QA 3BIIE 3NVYC 4WFAJ 1YTEA 1N8RJ 3CCVH 3CC2H 2W54B 3WNZA 3PAJA 3CCEH 1NJIJ 1WKIA 3RPFA 4AP8A 3ETRC 1VQPH 1N62B 4ZOHA 5HUPA 3C2FA 3CCRH 3FC4A 2WK6A 5H1SO 3NRZC 3AMZA 5DM6J 1Q82J 2B7NA 5GAHN 1VLBA 1DGJA 1QPNA 3EUB4 1N63B 1VQKH 2E3TA 4IO9J 1YI2H 5MPOC 1S72H 1M90J 1QPOA 3PIOJ 1N5WB 4I9AA 2ZJPJ 1NVJA 2W3RB 4US9A 4US8A 1YITH 1JJ2H 3NVZC 5EP8A 2I1OA 2Q5WE 3CCJH 3C2OA 3I56H 5AYZA 1VQ8H 5GADN 3G71H 1UOUA 1YIJH 3CCMH 5GAEN 1O4UA 3CF5J 1N60B 3CCUH 1AZYA 3AN1A 3C2VA 4IOAJ 1N5XA 4UY8M 1YJNH 1K8AJ 2W55B 4IOCJ 3G4SH 2WP4A 1FMAE 1ZXIB 4WCEJ 1VQ4H 3NVVC 3C2EA 1SB3A 3CCQH 1QAPA 4WFBJ 4KWWA 2QIEA 4GA5A 1VQMH 3L0GA 1VQLH 1VQNH 4KWVA 1YTKA 4GA4A 5AN9F 1OTPA 1FFVB 4U67J 1FM0E 1Q86J 2TPTA 1RM6A 3CC7H 1JRPB 2I14A 2DSJA 3B9JC 1JROB 1K9MJ 1V97A 3OW2H 5HUOA 5EY3A 3PIPJ 2OMDA 1FO4A
chains in the Genus database with same CATH topology
3BIIE 1NVIE 1NVJA 2QIEA 3RPFA 1FM0E 4AP8A 2Q5WE 2WP4A 1FMAE 2OMDA 5MPOC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3BII E;  1NVI E;  1NVJ A;  2QIE A;  3RPF A;  1FM0 E;  4AP8 A;  2Q5W E;  2WP4 A;  1FMA E;  2OMD A;  5MPO C; 
#chains in the Genus database with same CATH topology
 1FFU B;  1SIJ A;  2QA4 H;  1YJW H;  5HUL A;  1N61 B;  1KD1 J;  3H5Q A;  4WF9 J;  4WFN J;  4USA A;  1Q7Y J;  3L4P A;  5DM7 J;  1Q81 J;  3GNN A;  3DLL J;  3CCS H;  1VQO H;  1NVI E;  2W3S B;  1VQ6 H;  3AM9 A;  3WO1 A;  1X1O A;  2QEX H;  2JBM A;  3SR6 C;  1VQ7 H;  1K73 J;  1FIQ C;  4C80 A;  3NVW C;  1QPR A;  4GA6 A;  1YHQ H;  3C2R A;  1KC8 J;  3I55 H;  1M1K J;  1WYG A;  1YTD A;  4X46 A;  3NS1 C;  5GAG N;  1KQS H;  1YJ9 H;  1QVG H;  4YYY A;  5JVH J;  1BRW A;  1VDV A;  3CXC H;  3CD6 H;  2B7P A;  1QPQ A;  2PA2 A;  3CC4 H;  1Y69 K;  3CME H;  3CCL H;  1QVF H;  3TQV A;  3G6E H;  4LHM A;  4C7Y A;  1VQ5 H;  2OTJ H;  4YEK A;  3FAH A;  2J0F A;  4EAF A;  2OTL H;  5AYX A;  3VMM A;  5JVG J;  3CMA H;  3WO0 A;  1W2B H;  4C7Z A;  5HL7 J;  3CPW H;  4EAD A;  3J7Z M;  1VQ9 H;  2ZJR J;  5MLC O;  5AYY A;  4XR5 A;  2ZJQ J;  2WK5 A;  2B7Q A;  3BII E;  3NVY C;  4WFA J;  1YTE A;  1N8R J;  3CCV H;  3CC2 H;  2W54 B;  3WNZ A;  3PAJ A;  3CCE H;  1NJI J;  1WKI A;  3RPF A;  4AP8 A;  3ETR C;  1VQP H;  1N62 B;  4ZOH A;  5HUP A;  3C2F A;  3CCR H;  3FC4 A;  2WK6 A;  5H1S O;  3NRZ C;  3AMZ A;  5DM6 J;  1Q82 J;  2B7N A;  5GAH N;  1VLB A;  1DGJ A;  1QPN A;  3EUB 4;  1N63 B;  1VQK H;  2E3T A;  4IO9 J;  1YI2 H;  5MPO C;  1S72 H;  1M90 J;  1QPO A;  3PIO J;  1N5W B;  4I9A A;  2ZJP J;  1NVJ A;  2W3R B;  4US9 A;  4US8 A;  1YIT H;  1JJ2 H;  3NVZ C;  5EP8 A;  2I1O A;  2Q5W E;  3CCJ H;  3C2O A;  3I56 H;  5AYZ A;  1VQ8 H;  5GAD N;  3G71 H;  1UOU A;  1YIJ H;  3CCM H;  5GAE N;  1O4U A;  3CF5 J;  1N60 B;  3CCU H;  1AZY A;  3AN1 A;  3C2V A;  4IOA J;  1N5X A;  4UY8 M;  1YJN H;  1K8A J;  2W55 B;  4IOC J;  3G4S H;  2WP4 A;  1FMA E;  1ZXI B;  4WCE J;  1VQ4 H;  3NVV C;  3C2E A;  1SB3 A;  3CCQ H;  1QAP A;  4WFB J;  4KWW A;  2QIE A;  4GA5 A;  1VQM H;  3L0G A;  1VQL H;  1VQN H;  4KWV A;  1YTK A;  4GA4 A;  5AN9 F;  1OTP A;  1FFV B;  4U67 J;  1FM0 E;  1Q86 J;  2TPT A;  1RM6 A;  3CC7 H;  1JRP B;  2I14 A;  2DSJ A;  3B9J C;  1JRO B;  1K9M J;  1V97 A;  3OW2 H;  5HUO A;  5EY3 A;  3PIP J;  2OMD A;  1FO4 A; 
#chains in the Genus database with same CATH homology
 3BII E;  1NVI E;  1NVJ A;  2QIE A;  3RPF A;  1FM0 E;  4AP8 A;  2Q5W E;  2WP4 A;  1FMA E;  2OMD A;  5MPO C; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...