1OFZA

Crystal structure of fungal lectin : six-bladed beta-propeller fold and novel fucose recognition mode for aleuria aurantia lectin
Total Genus 67
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
67
sequence length
312
structure length
312
Chain Sequence
PTEFLYTSKIAAISWAATGGRQQRVYFQDLNGKIREAQRGGDNPWTGGSSQNVIGEAKLFSPLAAVTWKSAQGIQIRVYCVNKDNILSEFVYDGSKWITGQLGSVGVKVGSNSKLAALQWGGSESAPPNIRVYYQKSNLSGSSIHEYVWSGKWTAGASFGSTAPGTGIGATAIGPGRLRIYYQATDNKIREHCWDSNSWYVGGFSASASAGVSIAAISWGSTPNIRVYWQKGREELYEAAYGGSWNTPGQIKDASRPTPSLPDTFIAANSSGNIDISVFFQASGVSLQQWQWISGKGWSIGAVVPTGTPAGW
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Sugar binding protein
molecule keywords FUCOSE-SPECIFIC LECTIN
publication title Crystal Structure of Fungal Lectin: Six-Bladed {Beta}-Propeller Fold and Novel Fucose Recognition Mode for Aleuria Aurantia Lectin
pubmed doi rcsb
total genus 67
structure length 312
sequence length 312
chains with identical sequence B
ec nomenclature
pdb deposition date 2003-04-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07938 Fungal_lectin Fungal fucose-specific lectin
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.120.10.70 Mainly Beta 6 Propeller Neuraminidase Fucose-specific lectin 1ofzA00
4D52C 4AGIA 4AGTA 4UOUA 1IUBA 1OFZA 4AH4A 5EO7A 4C1YB 5H47A 4AHAA 1IUCA 4D52B 5EO8A 4D52A 4CSDA 4C1YA 4D4UA
chains in the Genus database with same CATH superfamily
1POOA 3SREA 3WDZA 1MS4A 2XZKA 3SOQA 5H47A 2IAPA 2G8SA 4GNBA 4MC7A 4DG6A 1MS0A 4XHXA 4GZWA 3DR2A 1IUCA 3NSSA 2HT5A 2GVWA 2F0ZA 2XZIA 5EX7A 2B8HA 2QWCA 2C4AA 4FPYA 3V1SA 4AGIA 1OFZA 4YW4A 2H2UA 4NCSA 4JMLA 2C4LA 3E5ZA 3U0SA 4MWQA 5GTQA 4L7CA 4C1YA 3SRGA 2IAWA 4FOQA 4MJVA 4Q6KA 5FZNA 1W21A 3VNGA 4CH9A 4X49A 2VSKA 3T1EA 3INBA 4WEGA 1RWLA 3TC9A 3H6JA 3K3AA 1INYA 4UOUA 1Z4WA 4HZWA 1Z4YA 2W5OA 4YY8A 4X4AA 1NCBN 2QWEA 2W20A 2YDPA 4BBWA 2YA7A 2FP8A 2YDTA 5B2DA 2IAXA 4NC5A 1DILA 2W38A 3H71A 5HX0A 1USRA 1WCSA 4I00A 1N1SA 1WCQA 2AGSA 1USXA 3O9JA 1F8BA 1MWEA 2OJHA 1N7DA 2GVXA 2AEQA 4CPNA 4XHBA 3I1CA 1CQ1A 4KS1A 5EO7A 3S8ZA 1MS9A 1NMCA 3BYCA 2V91A 3DASA 1IVFA 2CMLA 2IARA 3GVKA 4MWJA 4D52C 1INXA 2GHSA 3D12A 2SILA 4XJRA 1F8DA 3P5BL 3JU4A 4FPGA 4CHBA 2BERA 2F29A 4XIOA 2ZB6A 2IVZA 4GZTA 4XJUA 2VW0A 4O5TA 3A9HA 4QN3A 1S18A 4YZ5A 3TI5A 5F9TA 3G4HA 4XILA 4GNCA 2Z32A 2WOZA 1NNBA 3B69A 4B7NA 5HUNA 3H73A 5HUGA 1IVGA 4HIZA 3IAXA 2YA8A 3ADEA 1MS3A 7NN9A 3KGGA 4HW6A 4WA5A 4MJUA 4GDJA 3NN9A 2IAUA 1INVA 2F12A 1INWA 4GEZA 3WW9A 4QN5A 1E8UA 3LI3A 1EUTA 2FPBA 1SLLA 1NCAN 4D52B 2HU4A 2YA6A 4IN4A 1NCDN 2VVZA 4HZVA 4D8SA 2HTQA 2AEPA 1NMAN 1EURA 3SILA 1RWIA 4D4UA 1X2JA 4FP2A 1NNAA 1EUSA 1S1DA 1W0OA 1CRZA 3OPZA 1V3EA 3S2KA 4L7BA 4YW2A 4MWRA 1SO7A 4XJAA 2QWDA 3O9KA 4B7QA 3NO0A 2SIMA 4WA4A 2ZW9A 1Z4VA 4IFNX 4M4NA 1V0EA 2IAVA 4XJQA 4IFLX 4FOWA 2QE8A 4XMIA 3AMSA 4XYXA 4AHAA 4ASCA 3HLHA 2DSOA 1XOGA 4GZPA 2BZDA 1K32A 1NCCN 2FHRA 4CPMA 2QWFA 2YA4A 3LI5A 4YW3A 5HUMA 1B9TA 4MWUA 4KS4A 1V0ZA 2GVUA 4FOYA 4HHQA 4B7MA 1IVDA 2POOA 2VAQA 4HHOA 4C1YB 4DGRA 2QWAA 3FVZA 2F24A 2HTRA 2HT8A 2IASA 4R40A 1MS1A 4MWXA 5GX1A 3V65B 5FNUA 4KS2A 1Q7FA 3Q6TA 4SLIA 2VK7A 2ZWAA 5GX3A 3SALA 4CSDA 4L7DA 4MZEA 3G4EA 3VNHA 4XE9A 1A4QA 1V3BA 1V0FA 2A75A 5FNTA 1IVCA 5JYYA 4KS3A 1X2RA 4MZAA 4HZYA 6NN9A 1MZ6A 1NSDA 2F28A 2W8BA 1NMBN 3A9GA 1W0PA 4GN7A 5FWWA 4J9TA 4QN6A 1E8TA 1VCUA 4K1HA 4FPFA 4FP3A 1N6EA 4M4VA 3S8VA 2HTUA 1NSBA 2W8BB 3KYAA 4K1IA 5F72C 4YZ3A 2SLIA 4M4UA 1N6FA 2FLUX 1NNCA 4FPEA 4KS5A 4Q1UA 2F11A 3H72A 4B7JA 4AGTA 1SLIA 3B7EA 2F26A 5FNQA 4GZQA 2YA5A 4ZY3A 4MWWA 4G3NA 4A0PA 2QWGA 1EUUA 4YZ4A 4YZ2A 4QN7A 2FP9A 4IYGA 1E1AA 3L6VA 1N6DA 2HTVA 1NSCA 5D9CA 3CL0A 2P4OA 1DIMA 4XJ8A 1W1XA 3K38A 4FJ6A 2HT7A 3ALWA 5GX5A 4XIKA 4XOGA 4N1BA 4QNPA 1V2IA 4MX0A 1SUUA 1KITA 1Z4XA 3AMRA 4GDIA 3CYEA 1E8VA 3O4PA 4FPJA 4GN9A 4XJWA 4FVKA 3ZGDA 3TI6A 2QWHA 2QWKA 4CPOA 3A71A 4FOVA 1V3CA 1QBIA 4YW5A 2XZJA 4ZLRA 4MWLA 1W20A 1W8NA 1F8EA 2W5NA 4M3MA 4GNAA 4GN8A 5NN9A 1N1TA 1N1YA 1PJXA 3FW0A 3GVJA 2VSMA 2ISMA 4ZGCA 1INGA 5HUKA 1WP5A 2ZZKA 3HRPA 4FPOB 2HTYA 1U6DX 1F8CA 4X6KA 2QWBA 3UC1A 4K1JA 1L7HA 2GVVA 5GX2A 1B9SA 1QLGA 4GZSA 4YW1A 4YZ1A 3SOVA 4FPHA 1MS8A 4GB1A 2BF6A 3TI8A 1A4GA 5FNSA 3CL2A 3K39A 4FPCA 1V04A 1INFA 1IJQA 2BATA 4B7RA 3W09A 1ZGKA 3A72A 1NPEA 4K3YA 1Z4ZA 3WN7A 1A14N 4XJ9A 4AH4A 2VK6A 4WEFA 4XMBA 2HQSA 3II7A 1B9VA 1MR5A 4GZXA 1IVEA 1IVBA 3CKZA 3LI4A 4GJTA 4JF7A 4FPLA 3V64C 3TICA 3SOBB 4HZZA 1CVMA 3WWAA 1INHA 4MWVA 1C5KA 2DG1A 5EO8A 4PWZA 1XOEA 1V3DA 4K1KA 1H6LA 4HZXA 4IMBA 4UF7A 1N1VA 1MZ5A 3TI3A 1BJIA 5D9BA 2VWDA 2F27A 2FPCA 3K36A 4XMAA 1Z50A 2VPJA 4XJZA 2XCYA 3BEQA 2JKBA 1SNTA 2DYHA 5B2CA 3ZGCA 2IATA 2QWJA 3PJQA 2AH2A 2F25A 1L7FA 5GX4A 5FNRA 4GZOA 4CPYA 3TI4A 5CGJA 3HLIA 3TIAA 1ZI0A 1C9UA 4H52A 4NN9A 4H53A 1L7GA 2VK5A 4O5SA 5M1ZA 1NN2A 4CPZA 4IQKA 3ALXA 4X47A 2H2NA 2QWIA 1S0JA 1CRUA 2VW1A 2DG0A 1S0IA 1MS5A 2HTWA 4D52A 3K37A 2RKCA 3SANA 3Q6KA 4CPLA 4MWYA 2XN4A 4FZHA 2X9MA 3TIBA 3SLIA 2F10A 3D11A 1W8OA 4FQ4A 4IFJA 2IAQA 2HU0A 3GVLA 4QN4A 5FZJA 3Q6PA 4FPKA 1IUBA 4WA3A 5D9DA 2VW2A 2F13A 1VCJA 2ZB5A 3S94A 2IAOA
chains in the Genus database with same CATH topology
4D52C 4AGIA 4AGTA 4UOUA 1IUBA 1OFZA 4AH4A 5EO7A 4C1YB 5H47A 4AHAA 1IUCA 4D52B 5EO8A 4D52A 4CSDA 4C1YA 4D4UA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4D52 C;  4AGI A;  4AGT A;  4UOU A;  1IUB A;  1OFZ A;  4AH4 A;  5EO7 A;  4C1Y B;  5H47 A;  4AHA A;  1IUC A;  4D52 B;  5EO8 A;  4D52 A;  4CSD A;  4C1Y A;  4D4U A; 
#chains in the Genus database with same CATH topology
 1POO A;  3SRE A;  3WDZ A;  1MS4 A;  2XZK A;  3SOQ A;  5H47 A;  2IAP A;  2G8S A;  4GNB A;  4MC7 A;  4DG6 A;  1MS0 A;  4XHX A;  4GZW A;  3DR2 A;  1IUC A;  3NSS A;  2HT5 A;  2GVW A;  2F0Z A;  2XZI A;  5EX7 A;  2B8H A;  2QWC A;  2C4A A;  4FPY A;  3V1S A;  4AGI A;  1OFZ A;  4YW4 A;  2H2U A;  4NCS A;  4JML A;  2C4L A;  3E5Z A;  3U0S A;  4MWQ A;  5GTQ A;  4L7C A;  4C1Y A;  3SRG A;  2IAW A;  4FOQ A;  4MJV A;  4Q6K A;  5FZN A;  1W21 A;  3VNG A;  4CH9 A;  4X49 A;  2VSK A;  3T1E A;  3INB A;  4WEG A;  1RWL A;  3TC9 A;  3H6J A;  3K3A A;  1INY A;  4UOU A;  1Z4W A;  4HZW A;  1Z4Y A;  2W5O A;  4YY8 A;  4X4A A;  1NCB N;  2QWE A;  2W20 A;  2YDP A;  4BBW A;  2YA7 A;  2FP8 A;  2YDT A;  5B2D A;  2IAX A;  4NC5 A;  1DIL A;  2W38 A;  3H71 A;  5HX0 A;  1USR A;  1WCS A;  4I00 A;  1N1S A;  1WCQ A;  2AGS A;  1USX A;  3O9J A;  1F8B A;  1MWE A;  2OJH A;  1N7D A;  2GVX A;  2AEQ A;  4CPN A;  4XHB A;  3I1C A;  1CQ1 A;  4KS1 A;  5EO7 A;  3S8Z A;  1MS9 A;  1NMC A;  3BYC A;  2V91 A;  3DAS A;  1IVF A;  2CML A;  2IAR A;  3GVK A;  4MWJ A;  4D52 C;  1INX A;  2GHS A;  3D12 A;  2SIL A;  4XJR A;  1F8D A;  3P5B L;  3JU4 A;  4FPG A;  4CHB A;  2BER A;  2F29 A;  4XIO A;  2ZB6 A;  2IVZ A;  4GZT A;  4XJU A;  2VW0 A;  4O5T A;  3A9H A;  4QN3 A;  1S18 A;  4YZ5 A;  3TI5 A;  5F9T A;  3G4H A;  4XIL A;  4GNC A;  2Z32 A;  2WOZ A;  1NNB A;  3B69 A;  4B7N A;  5HUN A;  3H73 A;  5HUG A;  1IVG A;  4HIZ A;  3IAX A;  2YA8 A;  3ADE A;  1MS3 A;  7NN9 A;  3KGG A;  4HW6 A;  4WA5 A;  4MJU A;  4GDJ A;  3NN9 A;  2IAU A;  1INV A;  2F12 A;  1INW A;  4GEZ A;  3WW9 A;  4QN5 A;  1E8U A;  3LI3 A;  1EUT A;  2FPB A;  1SLL A;  1NCA N;  4D52 B;  2HU4 A;  2YA6 A;  4IN4 A;  1NCD N;  2VVZ A;  4HZV A;  4D8S A;  2HTQ A;  2AEP A;  1NMA N;  1EUR A;  3SIL A;  1RWI A;  4D4U A;  1X2J A;  4FP2 A;  1NNA A;  1EUS A;  1S1D A;  1W0O A;  1CRZ A;  3OPZ A;  1V3E A;  3S2K A;  4L7B A;  4YW2 A;  4MWR A;  1SO7 A;  4XJA A;  2QWD A;  3O9K A;  4B7Q A;  3NO0 A;  2SIM A;  4WA4 A;  2ZW9 A;  1Z4V A;  4IFN X;  4M4N A;  1V0E A;  2IAV A;  4XJQ A;  4IFL X;  4FOW A;  2QE8 A;  4XMI A;  3AMS A;  4XYX A;  4AHA A;  4ASC A;  3HLH A;  2DSO A;  1XOG A;  4GZP A;  2BZD A;  1K32 A;  1NCC N;  2FHR A;  4CPM A;  2QWF A;  2YA4 A;  3LI5 A;  4YW3 A;  5HUM A;  1B9T A;  4MWU A;  4KS4 A;  1V0Z A;  2GVU A;  4FOY A;  4HHQ A;  4B7M A;  1IVD A;  2POO A;  2VAQ A;  4HHO A;  4C1Y B;  4DGR A;  2QWA A;  3FVZ A;  2F24 A;  2HTR A;  2HT8 A;  2IAS A;  4R40 A;  1MS1 A;  4MWX A;  5GX1 A;  3V65 B;  5FNU A;  4KS2 A;  1Q7F A;  3Q6T A;  4SLI A;  2VK7 A;  2ZWA A;  5GX3 A;  3SAL A;  4CSD A;  4L7D A;  4MZE A;  3G4E A;  3VNH A;  4XE9 A;  1A4Q A;  1V3B A;  1V0F A;  2A75 A;  5FNT A;  1IVC A;  5JYY A;  4KS3 A;  1X2R A;  4MZA A;  4HZY A;  6NN9 A;  1MZ6 A;  1NSD A;  2F28 A;  2W8B A;  1NMB N;  3A9G A;  1W0P A;  4GN7 A;  5FWW A;  4J9T A;  4QN6 A;  1E8T A;  1VCU A;  4K1H A;  4FPF A;  4FP3 A;  1N6E A;  4M4V A;  3S8V A;  2HTU A;  1NSB A;  2W8B B;  3KYA A;  4K1I A;  5F72 C;  4YZ3 A;  2SLI A;  4M4U A;  1N6F A;  2FLU X;  1NNC A;  4FPE A;  4KS5 A;  4Q1U A;  2F11 A;  3H72 A;  4B7J A;  4AGT A;  1SLI A;  3B7E A;  2F26 A;  5FNQ A;  4GZQ A;  2YA5 A;  4ZY3 A;  4MWW A;  4G3N A;  4A0P A;  2QWG A;  1EUU A;  4YZ4 A;  4YZ2 A;  4QN7 A;  2FP9 A;  4IYG A;  1E1A A;  3L6V A;  1N6D A;  2HTV A;  1NSC A;  5D9C A;  3CL0 A;  2P4O A;  1DIM A;  4XJ8 A;  1W1X A;  3K38 A;  4FJ6 A;  2HT7 A;  3ALW A;  5GX5 A;  4XIK A;  4XOG A;  4N1B A;  4QNP A;  1V2I A;  4MX0 A;  1SUU A;  1KIT A;  1Z4X A;  3AMR A;  4GDI A;  3CYE A;  1E8V A;  3O4P A;  4FPJ A;  4GN9 A;  4XJW A;  4FVK A;  3ZGD A;  3TI6 A;  2QWH A;  2QWK A;  4CPO A;  3A71 A;  4FOV A;  1V3C A;  1QBI A;  4YW5 A;  2XZJ A;  4ZLR A;  4MWL A;  1W20 A;  1W8N A;  1F8E A;  2W5N A;  4M3M A;  4GNA A;  4GN8 A;  5NN9 A;  1N1T A;  1N1Y A;  1PJX A;  3FW0 A;  3GVJ A;  2VSM A;  2ISM A;  4ZGC A;  1ING A;  5HUK A;  1WP5 A;  2ZZK A;  3HRP A;  4FPO B;  2HTY A;  1U6D X;  1F8C A;  4X6K A;  2QWB A;  3UC1 A;  4K1J A;  1L7H A;  2GVV A;  5GX2 A;  1B9S A;  1QLG A;  4GZS A;  4YW1 A;  4YZ1 A;  3SOV A;  4FPH A;  1MS8 A;  4GB1 A;  2BF6 A;  3TI8 A;  1A4G A;  5FNS A;  3CL2 A;  3K39 A;  4FPC A;  1V04 A;  1INF A;  1IJQ A;  2BAT A;  4B7R A;  3W09 A;  1ZGK A;  3A72 A;  1NPE A;  4K3Y A;  1Z4Z A;  3WN7 A;  1A14 N;  4XJ9 A;  4AH4 A;  2VK6 A;  4WEF A;  4XMB A;  2HQS A;  3II7 A;  1B9V A;  1MR5 A;  4GZX A;  1IVE A;  1IVB A;  3CKZ A;  3LI4 A;  4GJT A;  4JF7 A;  4FPL A;  3V64 C;  3TIC A;  3SOB B;  4HZZ A;  1CVM A;  3WWA A;  1INH A;  4MWV A;  1C5K A;  2DG1 A;  5EO8 A;  4PWZ A;  1XOE A;  1V3D A;  4K1K A;  1H6L A;  4HZX A;  4IMB A;  4UF7 A;  1N1V A;  1MZ5 A;  3TI3 A;  1BJI A;  5D9B A;  2VWD A;  2F27 A;  2FPC A;  3K36 A;  4XMA A;  1Z50 A;  2VPJ A;  4XJZ A;  2XCY A;  3BEQ A;  2JKB A;  1SNT A;  2DYH A;  5B2C A;  3ZGC A;  2IAT A;  2QWJ A;  3PJQ A;  2AH2 A;  2F25 A;  1L7F A;  5GX4 A;  5FNR A;  4GZO A;  4CPY A;  3TI4 A;  5CGJ A;  3HLI A;  3TIA A;  1ZI0 A;  1C9U A;  4H52 A;  4NN9 A;  4H53 A;  1L7G A;  2VK5 A;  4O5S A;  5M1Z A;  1NN2 A;  4CPZ A;  4IQK A;  3ALX A;  4X47 A;  2H2N A;  2QWI A;  1S0J A;  1CRU A;  2VW1 A;  2DG0 A;  1S0I A;  1MS5 A;  2HTW A;  4D52 A;  3K37 A;  2RKC A;  3SAN A;  3Q6K A;  4CPL A;  4MWY A;  2XN4 A;  4FZH A;  2X9M A;  3TIB A;  3SLI A;  2F10 A;  3D11 A;  1W8O A;  4FQ4 A;  4IFJ A;  2IAQ A;  2HU0 A;  3GVL A;  4QN4 A;  5FZJ A;  3Q6P A;  4FPK A;  1IUB A;  4WA3 A;  5D9D A;  2VW2 A;  2F13 A;  1VCJ A;  2ZB5 A;  3S94 A;  2IAO A; 
#chains in the Genus database with same CATH homology
 4D52 C;  4AGI A;  4AGT A;  4UOU A;  1IUB A;  1OFZ A;  4AH4 A;  5EO7 A;  4C1Y B;  5H47 A;  4AHA A;  1IUC A;  4D52 B;  5EO8 A;  4D52 A;  4CSD A;  4C1Y A;  4D4U A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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