1OHAA

Acetylglutamate kinase from escherichia coli complexed with mgadp and n-acetyl-l-glutamate
Total Genus 86
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
86
sequence length
258
structure length
258
Chain Sequence
MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title The Course of Phosphorus in the Reaction of N-Acetyl-L-Glutamate Kinase, Determined from the Structures of Crystalline Complexes, Including a Complex with an Alf(4)(-) Transition State Mimic
pubmed doi rcsb
source organism Escherichia coli bl21(de3)
molecule tags Kinase
molecule keywords ACETYLGLUTAMATE KINASE
total genus 86
structure length 258
sequence length 258
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2003-05-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 1ohaA00
2J4JA 2W21A 2JJ4A 2RD5A 3QVFA 2BRIA 2BUFA 3AB4A 2OGXB 3QVHA 3L76A 1OHBA 2BNEA 3WWMA 2AKOA 3ZZHA 3T7BA 3L86A 2WE4A 4F6TA 4NDPA 2IJ9A 2BMUA 2E9YA 3K4YA 3K4OA 2J4KA 4NDRB 1GS5A 3ZZFA 2J0XA 2CDQA 3S6GA 2JI5A 4JZ7A 4OLCA 2BNDA 3LL5A 3D41A 2J0WA 3S6KA 2R8VA 4I49A 3NWYA 1E19A 4NDOB 3EK5A 3WWNA 3ZZIA 4USJA 2J4LA 3D2MA 3K56A 1OHAA 3C1MA 4JZ9A 1YBDA 3C1NA 2VA1A 2WE5A 3KZFA 2V4YA 3S6HA 2WXBA 1B7BA 3QUNA 3EK6A 2HMFA 4KZTA 3U6UA 1Z9DA 4Q1TA 3D40A 3K52A 2A1FA 2BTYA 4AB7A 4NDRA 4A7WA 4NDOA 3QURA 3LKKA 4AXSA 3QUOA 4NDQA 4JZ8A 3LL9A 3ZZGA 2V5HA 4A7XA 2JJXA 2BRXA 2X2WA 3TVIA 3B8GA 3D2PA 2AP9A 3AAWA 2BNFA 2J5VA 3AB2A 4F6TB 1GSJA 2R98A 2OGXA 1OH9A 2J5TA 4NDQB 4NDPB 3C20A
chains in the Genus database with same CATH superfamily
2J4JA 2W21A 2JJ4A 2RD5A 3QVFA 2BRIA 2BUFA 3AB4A 2OGXB 3QVHA 3L76A 1OHBA 2BNEA 3WWMA 2AKOA 3ZZHA 3T7BA 3L86A 2WE4A 4F6TA 4NDPA 2IJ9A 2BMUA 2E9YA 3K4YA 3K4OA 2J4KA 4NDRB 1GS5A 3ZZFA 2J0XA 2CDQA 3S6GA 2JI5A 4JZ7A 4OLCA 2BNDA 3LL5A 3D41A 2J0WA 3S6KA 2R8VA 4I49A 3NWYA 1E19A 4NDOB 3EK5A 3WWNA 3ZZIA 4USJA 2J4LA 3D2MA 3K56A 1OHAA 3C1MA 4JZ9A 1YBDA 3C1NA 2VA1A 2WE5A 3KZFA 2V4YA 3S6HA 2WXBA 1B7BA 3QUNA 3EK6A 2HMFA 4KZTA 3U6UA 1Z9DA 4Q1TA 3D40A 3K52A 2A1FA 2BTYA 4AB7A 4NDRA 4A7WA 4NDOA 3QURA 3LKKA 4AXSA 3QUOA 4NDQA 4JZ8A 3LL9A 3ZZGA 2V5HA 4A7XA 2JJXA 2BRXA 2X2WA 3TVIA 3B8GA 3D2PA 2AP9A 3AAWA 2BNFA 2J5VA 3AB2A 4F6TB 1GSJA 2R98A 2OGXA 1OH9A 2J5TA 4NDQB 4NDPB 3C20A
chains in the Genus database with same CATH topology
2J4JA 2W21A 2JJ4A 2RD5A 3QVFA 2BRIA 2BUFA 3AB4A 2OGXB 3QVHA 3L76A 1OHBA 2BNEA 3WWMA 2AKOA 3ZZHA 3T7BA 3L86A 2WE4A 4F6TA 4NDPA 2IJ9A 2BMUA 2E9YA 3K4YA 3K4OA 2J4KA 4NDRB 1GS5A 3ZZFA 2J0XA 2CDQA 3S6GA 2JI5A 4JZ7A 4OLCA 2BNDA 3LL5A 3D41A 2J0WA 3S6KA 2R8VA 4I49A 3NWYA 1E19A 4NDOB 3EK5A 3WWNA 3ZZIA 4USJA 2J4LA 3D2MA 3K56A 1OHAA 3C1MA 4JZ9A 1YBDA 3C1NA 2VA1A 2WE5A 3KZFA 2V4YA 3S6HA 2WXBA 1B7BA 3QUNA 3EK6A 2HMFA 4KZTA 3U6UA 1Z9DA 4Q1TA 3D40A 3K52A 2A1FA 2BTYA 4AB7A 4NDRA 4A7WA 4NDOA 3QURA 3LKKA 4AXSA 3QUOA 4NDQA 4JZ8A 3LL9A 3ZZGA 2V5HA 4A7XA 2JJXA 2BRXA 2X2WA 3TVIA 3B8GA 3D2PA 2AP9A 3AAWA 2BNFA 2J5VA 3AB2A 4F6TB 1GSJA 2R98A 2OGXA 1OH9A 2J5TA 4NDQB 4NDPB 3C20A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2J4J A;  2W21 A;  2JJ4 A;  2RD5 A;  3QVF A;  2BRI A;  2BUF A;  3AB4 A;  2OGX B;  3QVH A;  3L76 A;  1OHB A;  2BNE A;  3WWM A;  2AKO A;  3ZZH A;  3T7B A;  3L86 A;  2WE4 A;  4F6T A;  4NDP A;  2IJ9 A;  2BMU A;  2E9Y A;  3K4Y A;  3K4O A;  2J4K A;  4NDR B;  1GS5 A;  3ZZF A;  2J0X A;  2CDQ A;  3S6G A;  2JI5 A;  4JZ7 A;  4OLC A;  2BND A;  3LL5 A;  3D41 A;  2J0W A;  3S6K A;  2R8V A;  4I49 A;  3NWY A;  1E19 A;  4NDO B;  3EK5 A;  3WWN A;  3ZZI A;  4USJ A;  2J4L A;  3D2M A;  3K56 A;  1OHA A;  3C1M A;  4JZ9 A;  1YBD A;  3C1N A;  2VA1 A;  2WE5 A;  3KZF A;  2V4Y A;  3S6H A;  2WXB A;  1B7B A;  3QUN A;  3EK6 A;  2HMF A;  4KZT A;  3U6U A;  1Z9D A;  4Q1T A;  3D40 A;  3K52 A;  2A1F A;  2BTY A;  4AB7 A;  4NDR A;  4A7W A;  4NDO A;  3QUR A;  3LKK A;  4AXS A;  3QUO A;  4NDQ A;  4JZ8 A;  3LL9 A;  3ZZG A;  2V5H A;  4A7X A;  2JJX A;  2BRX A;  2X2W A;  3TVI A;  3B8G A;  3D2P A;  2AP9 A;  3AAW A;  2BNF A;  2J5V A;  3AB2 A;  4F6T B;  1GSJ A;  2R98 A;  2OGX A;  1OH9 A;  2J5T A;  4NDQ B;  4NDP B;  3C20 A; 
#chains in the Genus database with same CATH topology
 2J4J A;  2W21 A;  2JJ4 A;  2RD5 A;  3QVF A;  2BRI A;  2BUF A;  3AB4 A;  2OGX B;  3QVH A;  3L76 A;  1OHB A;  2BNE A;  3WWM A;  2AKO A;  3ZZH A;  3T7B A;  3L86 A;  2WE4 A;  4F6T A;  4NDP A;  2IJ9 A;  2BMU A;  2E9Y A;  3K4Y A;  3K4O A;  2J4K A;  4NDR B;  1GS5 A;  3ZZF A;  2J0X A;  2CDQ A;  3S6G A;  2JI5 A;  4JZ7 A;  4OLC A;  2BND A;  3LL5 A;  3D41 A;  2J0W A;  3S6K A;  2R8V A;  4I49 A;  3NWY A;  1E19 A;  4NDO B;  3EK5 A;  3WWN A;  3ZZI A;  4USJ A;  2J4L A;  3D2M A;  3K56 A;  1OHA A;  3C1M A;  4JZ9 A;  1YBD A;  3C1N A;  2VA1 A;  2WE5 A;  3KZF A;  2V4Y A;  3S6H A;  2WXB A;  1B7B A;  3QUN A;  3EK6 A;  2HMF A;  4KZT A;  3U6U A;  1Z9D A;  4Q1T A;  3D40 A;  3K52 A;  2A1F A;  2BTY A;  4AB7 A;  4NDR A;  4A7W A;  4NDO A;  3QUR A;  3LKK A;  4AXS A;  3QUO A;  4NDQ A;  4JZ8 A;  3LL9 A;  3ZZG A;  2V5H A;  4A7X A;  2JJX A;  2BRX A;  2X2W A;  3TVI A;  3B8G A;  3D2P A;  2AP9 A;  3AAW A;  2BNF A;  2J5V A;  3AB2 A;  4F6T B;  1GSJ A;  2R98 A;  2OGX A;  1OH9 A;  2J5T A;  4NDQ B;  4NDP B;  3C20 A; 
#chains in the Genus database with same CATH homology
 2J4J A;  2W21 A;  2JJ4 A;  2RD5 A;  3QVF A;  2BRI A;  2BUF A;  3AB4 A;  2OGX B;  3QVH A;  3L76 A;  1OHB A;  2BNE A;  3WWM A;  2AKO A;  3ZZH A;  3T7B A;  3L86 A;  2WE4 A;  4F6T A;  4NDP A;  2IJ9 A;  2BMU A;  2E9Y A;  3K4Y A;  3K4O A;  2J4K A;  4NDR B;  1GS5 A;  3ZZF A;  2J0X A;  2CDQ A;  3S6G A;  2JI5 A;  4JZ7 A;  4OLC A;  2BND A;  3LL5 A;  3D41 A;  2J0W A;  3S6K A;  2R8V A;  4I49 A;  3NWY A;  1E19 A;  4NDO B;  3EK5 A;  3WWN A;  3ZZI A;  4USJ A;  2J4L A;  3D2M A;  3K56 A;  1OHA A;  3C1M A;  4JZ9 A;  1YBD A;  3C1N A;  2VA1 A;  2WE5 A;  3KZF A;  2V4Y A;  3S6H A;  2WXB A;  1B7B A;  3QUN A;  3EK6 A;  2HMF A;  4KZT A;  3U6U A;  1Z9D A;  4Q1T A;  3D40 A;  3K52 A;  2A1F A;  2BTY A;  4AB7 A;  4NDR A;  4A7W A;  4NDO A;  3QUR A;  3LKK A;  4AXS A;  3QUO A;  4NDQ A;  4JZ8 A;  3LL9 A;  3ZZG A;  2V5H A;  4A7X A;  2JJX A;  2BRX A;  2X2W A;  3TVI A;  3B8G A;  3D2P A;  2AP9 A;  3AAW A;  2BNF A;  2J5V A;  3AB2 A;  4F6T B;  1GSJ A;  2R98 A;  2OGX A;  1OH9 A;  2J5T A;  4NDQ B;  4NDP B;  3C20 A; 
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similar chains in the Genus database (?% sequence similarity)
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