1OHAA

Acetylglutamate kinase from escherichia coli complexed with mgadp and n-acetyl-l-glutamate
Total Genus 86
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
86
sequence length
258
structure length
258
Chain Sequence
b'MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords ACETYLGLUTAMATE KINASE
publication title The Course of Phosphorus in the Reaction of N-Acetyl-L-Glutamate Kinase, Determined from the Structures of Crystalline Complexes, Including a Complex with an Alf(4)(-) Transition State Mimic
pubmed doi rcsb
source organism Escherichia coli bl21(de3)
molecule tags Kinase
total genus 86
structure length 258
sequence length 258
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2003-05-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 1ohaA00
1OH9A 2AP9A 2WE4A 3NWYA 3QVHA 4A7WA 3ZZIA 3ZZFA 3QURA 3L76A 2JI5A 3AB2A 2OGXB 2BUFA 2J0XA 4JZ9A 2RD5A 3LKKA 3D40A 1E19A 4NDQB 3S6GA 3D2PA 4NDPA 4A7XA 3D41A 4NDOB 2BNDA 2JJ4A 4KZTA 3T7BA 2BNEA 2AKOA 3WWMA 2J5VA 3C1NA 3D2MA 4JZ8A 4USJA 3C20A 2J4LA 1YBDA 2HMFA 3K4OA 2OGXA 3ZZGA 3ZZHA 4AXSA 3AB4A 3EK5A 3WWNA 4F6TB 2A1FA 3S6KA 1OHAA 3K56A 4NDQA 3C1MA 2W21A 3AAWA 4NDOA 4Q1TA 2R8VA 2J5TA 4NDRB 1GSJA 2J4JA 2V5HA 3QVFA 2J4KA 3LL5A 3KZFA 2IJ9A 2CDQA 3L86A 2R98A 4OLCA 3QUOA 3U6UA 1Z9DA 2E9YA 2WE5A 1GS5A 2JJXA 4F6TA 3EK6A 2BTYA 1OHBA 3QUNA 3B8GA 3K52A 2BMUA 2BRIA 2BRXA 1B7BA 2V4YA 4NDRA 3TVIA 3S6HA 4I49A 3LL9A 2BNFA 2VA1A 2X2WA 4NDPB 3K4YA 2WXBA 4AB7A 2J0WA 4JZ7A
chains in the Genus database with same CATH superfamily
1OH9A 2AP9A 2WE4A 3NWYA 3QVHA 4A7WA 3ZZIA 3ZZFA 3QURA 3L76A 2JI5A 3AB2A 2OGXB 2BUFA 2J0XA 4JZ9A 2RD5A 3LKKA 3D40A 1E19A 4NDQB 3S6GA 3D2PA 4NDPA 4A7XA 3D41A 4NDOB 2BNDA 2JJ4A 4KZTA 3T7BA 2BNEA 2AKOA 3WWMA 2J5VA 3C1NA 3D2MA 4JZ8A 4USJA 3C20A 2J4LA 1YBDA 2HMFA 3K4OA 2OGXA 3ZZGA 3ZZHA 4AXSA 3AB4A 3EK5A 3WWNA 4F6TB 2A1FA 3S6KA 1OHAA 3K56A 4NDQA 3C1MA 2W21A 3AAWA 4NDOA 4Q1TA 2R8VA 2J5TA 4NDRB 1GSJA 2J4JA 2V5HA 3QVFA 2J4KA 3LL5A 3KZFA 2IJ9A 2CDQA 3L86A 2R98A 4OLCA 3QUOA 3U6UA 1Z9DA 2E9YA 2WE5A 1GS5A 2JJXA 4F6TA 3EK6A 2BTYA 1OHBA 3QUNA 3B8GA 3K52A 2BMUA 2BRIA 2BRXA 1B7BA 2V4YA 4NDRA 3TVIA 3S6HA 4I49A 3LL9A 2BNFA 2VA1A 2X2WA 4NDPB 3K4YA 2WXBA 4AB7A 2J0WA 4JZ7A
chains in the Genus database with same CATH topology
1OH9A 2AP9A 2WE4A 3NWYA 3QVHA 4A7WA 3ZZIA 3ZZFA 3QURA 3L76A 2JI5A 3AB2A 2OGXB 2BUFA 2J0XA 4JZ9A 2RD5A 3LKKA 3D40A 1E19A 4NDQB 3S6GA 3D2PA 4NDPA 4A7XA 3D41A 4NDOB 2BNDA 2JJ4A 4KZTA 3T7BA 2BNEA 2AKOA 3WWMA 2J5VA 3C1NA 3D2MA 4JZ8A 4USJA 3C20A 2J4LA 1YBDA 2HMFA 3K4OA 2OGXA 3ZZGA 3ZZHA 4AXSA 3AB4A 3EK5A 3WWNA 4F6TB 2A1FA 3S6KA 1OHAA 3K56A 4NDQA 3C1MA 2W21A 3AAWA 4NDOA 4Q1TA 2R8VA 2J5TA 4NDRB 1GSJA 2J4JA 2V5HA 3QVFA 2J4KA 3LL5A 3KZFA 2IJ9A 2CDQA 3L86A 2R98A 4OLCA 3QUOA 3U6UA 1Z9DA 2E9YA 2WE5A 1GS5A 2JJXA 4F6TA 3EK6A 2BTYA 1OHBA 3QUNA 3B8GA 3K52A 2BMUA 2BRIA 2BRXA 1B7BA 2V4YA 4NDRA 3TVIA 3S6HA 4I49A 3LL9A 2BNFA 2VA1A 2X2WA 4NDPB 3K4YA 2WXBA 4AB7A 2J0WA 4JZ7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1OH9 A;  2AP9 A;  2WE4 A;  3NWY A;  3QVH A;  4A7W A;  3ZZI A;  3ZZF A;  3QUR A;  3L76 A;  2JI5 A;  3AB2 A;  2OGX B;  2BUF A;  2J0X A;  4JZ9 A;  2RD5 A;  3LKK A;  3D40 A;  1E19 A;  4NDQ B;  3S6G A;  3D2P A;  4NDP A;  4A7X A;  3D41 A;  4NDO B;  2BND A;  2JJ4 A;  4KZT A;  3T7B A;  2BNE A;  2AKO A;  3WWM A;  2J5V A;  3C1N A;  3D2M A;  4JZ8 A;  4USJ A;  3C20 A;  2J4L A;  1YBD A;  2HMF A;  3K4O A;  2OGX A;  3ZZG A;  3ZZH A;  4AXS A;  3AB4 A;  3EK5 A;  3WWN A;  4F6T B;  2A1F A;  3S6K A;  1OHA A;  3K56 A;  4NDQ A;  3C1M A;  2W21 A;  3AAW A;  4NDO A;  4Q1T A;  2R8V A;  2J5T A;  4NDR B;  1GSJ A;  2J4J A;  2V5H A;  3QVF A;  2J4K A;  3LL5 A;  3KZF A;  2IJ9 A;  2CDQ A;  3L86 A;  2R98 A;  4OLC A;  3QUO A;  3U6U A;  1Z9D A;  2E9Y A;  2WE5 A;  1GS5 A;  2JJX A;  4F6T A;  3EK6 A;  2BTY A;  1OHB A;  3QUN A;  3B8G A;  3K52 A;  2BMU A;  2BRI A;  2BRX A;  1B7B A;  2V4Y A;  4NDR A;  3TVI A;  3S6H A;  4I49 A;  3LL9 A;  2BNF A;  2VA1 A;  2X2W A;  4NDP B;  3K4Y A;  2WXB A;  4AB7 A;  2J0W A;  4JZ7 A; 
#chains in the Genus database with same CATH topology
 1OH9 A;  2AP9 A;  2WE4 A;  3NWY A;  3QVH A;  4A7W A;  3ZZI A;  3ZZF A;  3QUR A;  3L76 A;  2JI5 A;  3AB2 A;  2OGX B;  2BUF A;  2J0X A;  4JZ9 A;  2RD5 A;  3LKK A;  3D40 A;  1E19 A;  4NDQ B;  3S6G A;  3D2P A;  4NDP A;  4A7X A;  3D41 A;  4NDO B;  2BND A;  2JJ4 A;  4KZT A;  3T7B A;  2BNE A;  2AKO A;  3WWM A;  2J5V A;  3C1N A;  3D2M A;  4JZ8 A;  4USJ A;  3C20 A;  2J4L A;  1YBD A;  2HMF A;  3K4O A;  2OGX A;  3ZZG A;  3ZZH A;  4AXS A;  3AB4 A;  3EK5 A;  3WWN A;  4F6T B;  2A1F A;  3S6K A;  1OHA A;  3K56 A;  4NDQ A;  3C1M A;  2W21 A;  3AAW A;  4NDO A;  4Q1T A;  2R8V A;  2J5T A;  4NDR B;  1GSJ A;  2J4J A;  2V5H A;  3QVF A;  2J4K A;  3LL5 A;  3KZF A;  2IJ9 A;  2CDQ A;  3L86 A;  2R98 A;  4OLC A;  3QUO A;  3U6U A;  1Z9D A;  2E9Y A;  2WE5 A;  1GS5 A;  2JJX A;  4F6T A;  3EK6 A;  2BTY A;  1OHB A;  3QUN A;  3B8G A;  3K52 A;  2BMU A;  2BRI A;  2BRX A;  1B7B A;  2V4Y A;  4NDR A;  3TVI A;  3S6H A;  4I49 A;  3LL9 A;  2BNF A;  2VA1 A;  2X2W A;  4NDP B;  3K4Y A;  2WXB A;  4AB7 A;  2J0W A;  4JZ7 A; 
#chains in the Genus database with same CATH homology
 1OH9 A;  2AP9 A;  2WE4 A;  3NWY A;  3QVH A;  4A7W A;  3ZZI A;  3ZZF A;  3QUR A;  3L76 A;  2JI5 A;  3AB2 A;  2OGX B;  2BUF A;  2J0X A;  4JZ9 A;  2RD5 A;  3LKK A;  3D40 A;  1E19 A;  4NDQ B;  3S6G A;  3D2P A;  4NDP A;  4A7X A;  3D41 A;  4NDO B;  2BND A;  2JJ4 A;  4KZT A;  3T7B A;  2BNE A;  2AKO A;  3WWM A;  2J5V A;  3C1N A;  3D2M A;  4JZ8 A;  4USJ A;  3C20 A;  2J4L A;  1YBD A;  2HMF A;  3K4O A;  2OGX A;  3ZZG A;  3ZZH A;  4AXS A;  3AB4 A;  3EK5 A;  3WWN A;  4F6T B;  2A1F A;  3S6K A;  1OHA A;  3K56 A;  4NDQ A;  3C1M A;  2W21 A;  3AAW A;  4NDO A;  4Q1T A;  2R8V A;  2J5T A;  4NDR B;  1GSJ A;  2J4J A;  2V5H A;  3QVF A;  2J4K A;  3LL5 A;  3KZF A;  2IJ9 A;  2CDQ A;  3L86 A;  2R98 A;  4OLC A;  3QUO A;  3U6U A;  1Z9D A;  2E9Y A;  2WE5 A;  1GS5 A;  2JJX A;  4F6T A;  3EK6 A;  2BTY A;  1OHB A;  3QUN A;  3B8G A;  3K52 A;  2BMU A;  2BRI A;  2BRX A;  1B7B A;  2V4Y A;  4NDR A;  3TVI A;  3S6H A;  4I49 A;  3LL9 A;  2BNF A;  2VA1 A;  2X2W A;  4NDP B;  3K4Y A;  2WXB A;  4AB7 A;  2J0W A;  4JZ7 A; 
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similar chains in the pdb database (?% sequence similarity)

 
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