1OJQA

The crystal structure of c3stau2 from s. aureus
Total Genus 69
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
69
sequence length
212
structure length
212
Chain Sequence
AETKNFTDLVEATKWGNSLIKSAKYSSKDKMAIYNYTKNSSPINTPLRSANGDVNKLSENIQEQVRQLDSTISKSVTPDSVYVYRLLNLDYLSSITGFTREDLHMLQQTNNGQYNEALVSKLNNLMNSRIYRENGYSSTQLVSGAALAGRPIELKLELPKGTKAAYIDSKELTAYPGQQEVLLPRGTEYAVGSVKLSDNKRKIIITAVVFKK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords ADP-RIBOSYLTRANSFERASE
publication title The Crystal Structure of C3Stau2 from Staphylococcus Aureus and its Complex with Nad
pubmed doi rcsb
source organism Staphylococcus aureus
molecule tags Transferase
total genus 69
structure length 212
sequence length 212
ec nomenclature
pdb deposition date 2003-07-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03496 ADPrib_exo_Tox ADP-ribosyltransferase exoenzyme
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.176.10 Alpha Beta Alpha-Beta Complex Toxin ADP-ribosyltransferase; Chain A, domain 1 Toxin ADP-ribosyltransferase; Chain A, domain 1 1ojqA00
1OG1A 2C89A 1R45A 5D1TA 4XSGB 4PKQA 1GXZA 2BOVB 2C8DA 4ELNA 2GWMA 2J3VA 4H0XA 4WF6A 2WN5A 1PWVA 4PKTA 4DV8A 4H0YA 1UZIA 2C8BX 5GTTA 4PKRA 4GF1A 1G24A 2J3ZA 4XM8A 2J3XA 1GZFA 2WN6A 4XM6A 4GY2A 1OJQA 4PKWA 4XSHB 2C8HA 1R4BA 5BWMB 3BW8A 5D1SA 2A9KB 1JKYA 2WN4A 2C8AA 1OG4A 1PWUA 1GIQA 2GWLA 4H0TA 1QS1A 1GXYA 4PKVA 1PWPA 2C8CA 4FK7A 4H0VA 5H04A 2A78B 3U0JA 1GIRA 4XM7A 4PKSA 4PKUA 1ZXVA 1OG3A 1QS2A 1YQYA 1PWWA 2C8GA 1GZEA 1J7NA 3NTSA 5H03A 4FMLA 1OJZA 1PWQA 4FXQA 1GY0A 2C8FE 4H03A 5D1UA 3BUZA 2C8EE 4TR5A 2WN7A 2WN8A 5DZQA
chains in the Genus database with same CATH superfamily
1OG1A 2C89A 1R45A 5D1TA 4XSGB 4PKQA 1GXZA 2BOVB 2C8DA 4ELNA 2GWMA 2J3VA 4H0XA 4WF6A 2WN5A 1PWVA 4PKTA 4DV8A 4H0YA 1UZIA 2C8BX 5GTTA 4PKRA 4GF1A 1G24A 2J3ZA 4XM8A 2J3XA 1GZFA 2WN6A 4XM6A 4GY2A 1OJQA 4PKWA 4XSHB 2C8HA 1R4BA 5BWMB 3BW8A 5D1SA 2A9KB 1JKYA 2WN4A 2C8AA 1OG4A 1PWUA 1GIQA 2GWLA 4H0TA 1QS1A 1GXYA 4PKVA 1PWPA 2C8CA 4FK7A 4H0VA 5H04A 2A78B 3U0JA 1GIRA 4XM7A 4PKSA 4PKUA 1ZXVA 1OG3A 1QS2A 1YQYA 1PWWA 2C8GA 1GZEA 1J7NA 3NTSA 5H03A 4FMLA 1OJZA 1PWQA 4FXQA 1GY0A 2C8FE 4H03A 5D1UA 3BUZA 2C8EE 4TR5A 2WN7A 2WN8A 5DZQA
chains in the Genus database with same CATH topology
1OG1A 2C89A 1R45A 5D1TA 4XSGB 4PKQA 1GXZA 2BOVB 2C8DA 4ELNA 2GWMA 2J3VA 4H0XA 4WF6A 2WN5A 1PWVA 4PKTA 4DV8A 4H0YA 1UZIA 2C8BX 5GTTA 4PKRA 4GF1A 1G24A 2J3ZA 4XM8A 2J3XA 1GZFA 2WN6A 4XM6A 4GY2A 1OJQA 4PKWA 4XSHB 2C8HA 1R4BA 5BWMB 3BW8A 5D1SA 2A9KB 1JKYA 2WN4A 2C8AA 1OG4A 1PWUA 1GIQA 2GWLA 4H0TA 1QS1A 1GXYA 4PKVA 1PWPA 2C8CA 4FK7A 4H0VA 5H04A 2A78B 3U0JA 1GIRA 4XM7A 4PKSA 4PKUA 1ZXVA 1OG3A 1QS2A 1YQYA 1PWWA 2C8GA 1GZEA 1J7NA 3NTSA 5H03A 4FMLA 1OJZA 1PWQA 4FXQA 1GY0A 2C8FE 4H03A 5D1UA 3BUZA 2C8EE 4TR5A 2WN7A 2WN8A 5DZQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1OG1 A;  2C89 A;  1R45 A;  5D1T A;  4XSG B;  4PKQ A;  1GXZ A;  2BOV B;  2C8D A;  4ELN A;  2GWM A;  2J3V A;  4H0X A;  4WF6 A;  2WN5 A;  1PWV A;  4PKT A;  4DV8 A;  4H0Y A;  1UZI A;  2C8B X;  5GTT A;  4PKR A;  4GF1 A;  1G24 A;  2J3Z A;  4XM8 A;  2J3X A;  1GZF A;  2WN6 A;  4XM6 A;  4GY2 A;  1OJQ A;  4PKW A;  4XSH B;  2C8H A;  1R4B A;  5BWM B;  3BW8 A;  5D1S A;  2A9K B;  1JKY A;  2WN4 A;  2C8A A;  1OG4 A;  1PWU A;  1GIQ A;  2GWL A;  4H0T A;  1QS1 A;  1GXY A;  4PKV A;  1PWP A;  2C8C A;  4FK7 A;  4H0V A;  5H04 A;  2A78 B;  3U0J A;  1GIR A;  4XM7 A;  4PKS A;  4PKU A;  1ZXV A;  1OG3 A;  1QS2 A;  1YQY A;  1PWW A;  2C8G A;  1GZE A;  1J7N A;  3NTS A;  5H03 A;  4FML A;  1OJZ A;  1PWQ A;  4FXQ A;  1GY0 A;  2C8F E;  4H03 A;  5D1U A;  3BUZ A;  2C8E E;  4TR5 A;  2WN7 A;  2WN8 A;  5DZQ A; 
#chains in the Genus database with same CATH topology
 1OG1 A;  2C89 A;  1R45 A;  5D1T A;  4XSG B;  4PKQ A;  1GXZ A;  2BOV B;  2C8D A;  4ELN A;  2GWM A;  2J3V A;  4H0X A;  4WF6 A;  2WN5 A;  1PWV A;  4PKT A;  4DV8 A;  4H0Y A;  1UZI A;  2C8B X;  5GTT A;  4PKR A;  4GF1 A;  1G24 A;  2J3Z A;  4XM8 A;  2J3X A;  1GZF A;  2WN6 A;  4XM6 A;  4GY2 A;  1OJQ A;  4PKW A;  4XSH B;  2C8H A;  1R4B A;  5BWM B;  3BW8 A;  5D1S A;  2A9K B;  1JKY A;  2WN4 A;  2C8A A;  1OG4 A;  1PWU A;  1GIQ A;  2GWL A;  4H0T A;  1QS1 A;  1GXY A;  4PKV A;  1PWP A;  2C8C A;  4FK7 A;  4H0V A;  5H04 A;  2A78 B;  3U0J A;  1GIR A;  4XM7 A;  4PKS A;  4PKU A;  1ZXV A;  1OG3 A;  1QS2 A;  1YQY A;  1PWW A;  2C8G A;  1GZE A;  1J7N A;  3NTS A;  5H03 A;  4FML A;  1OJZ A;  1PWQ A;  4FXQ A;  1GY0 A;  2C8F E;  4H03 A;  5D1U A;  3BUZ A;  2C8E E;  4TR5 A;  2WN7 A;  2WN8 A;  5DZQ A; 
#chains in the Genus database with same CATH homology
 1OG1 A;  2C89 A;  1R45 A;  5D1T A;  4XSG B;  4PKQ A;  1GXZ A;  2BOV B;  2C8D A;  4ELN A;  2GWM A;  2J3V A;  4H0X A;  4WF6 A;  2WN5 A;  1PWV A;  4PKT A;  4DV8 A;  4H0Y A;  1UZI A;  2C8B X;  5GTT A;  4PKR A;  4GF1 A;  1G24 A;  2J3Z A;  4XM8 A;  2J3X A;  1GZF A;  2WN6 A;  4XM6 A;  4GY2 A;  1OJQ A;  4PKW A;  4XSH B;  2C8H A;  1R4B A;  5BWM B;  3BW8 A;  5D1S A;  2A9K B;  1JKY A;  2WN4 A;  2C8A A;  1OG4 A;  1PWU A;  1GIQ A;  2GWL A;  4H0T A;  1QS1 A;  1GXY A;  4PKV A;  1PWP A;  2C8C A;  4FK7 A;  4H0V A;  5H04 A;  2A78 B;  3U0J A;  1GIR A;  4XM7 A;  4PKS A;  4PKU A;  1ZXV A;  1OG3 A;  1QS2 A;  1YQY A;  1PWW A;  2C8G A;  1GZE A;  1J7N A;  3NTS A;  5H03 A;  4FML A;  1OJZ A;  1PWQ A;  4FXQ A;  1GY0 A;  2C8F E;  4H03 A;  5D1U A;  3BUZ A;  2C8E E;  4TR5 A;  2WN7 A;  2WN8 A;  5DZQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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