1OOZA

Deletion mutant of succinyl-coa:3-ketoacid coa transferase from pig heart
Total Genus 150
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
150
sequence length
475
structure length
463
Chain Sequence
TKFYTDAVEAVKDIPNGATVLVGGFGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLGLLLQSKQIKRMISSYVGENAEFERQYLAGELEVELTPQGTLAERIRAGGAGVPAFYTSTGYGTLVQEGGSPIKYNKDGSIAIASKPREVREFNGQHFILEEAIRGDFALVKAWKADQAGNVTFRKSARNFNLPMCKAAETTVVEVEEIVDIGSFAPEDIHIPKIYVHRLVKGEKYEKRIERLSVRDNVRERIIKRAALEFEDGMYANLGIGIPLLASNFISPNMTVHLQSENGILGLGPYPLQNEVDADLINAGKETVTVLPGASYFSSDESFAMIRGGHVNLTMLGAMQVSKYGDLANWMVKGMGGAMDLVSSAKTKVVVTMEHSAKGNAHKIMEKCTLPLTGKQCVNRIITEKAVFDVDRKKGLTLIELWEGLTVDDIKKSTGCDFAVSPKLIPMQQVTT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
molecule keywords Succinyl-CoA:3-ketoacid-coenzyme A transferase
publication title Structure of the CoA transferase from pig heart to 1.7 A resolution.
pubmed doi rcsb
source organism Sus scrofa
total genus 150
structure length 463
sequence length 475
chains with identical sequence B
ec nomenclature ec 2.8.3.5: 3-oxoacid CoA-transferase.
pdb deposition date 2003-03-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01144 CoA_trans Coenzyme A transferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1080.10 Alpha Beta 3-Layer(aba) Sandwich Glutaconate Coenzyme A-transferase Glutaconate Coenzyme A-transferase 1oozA01
3.40.1080.10 Alpha Beta 3-Layer(aba) Sandwich Glutaconate Coenzyme A-transferase Glutaconate Coenzyme A-transferase 1oozA02
3DLXA 1O9LA 1OOYA 1K6DA 1XR4A 3GK7A 3EH7A 2AHVA 3D3UA 2NRCA 3CDKA 4KGBA 3CDKB 3OXOA 1OPEA 2AHUA 3K6MA 3RRLA 2NRBA 2HJ0A 3RRLB 2OASA 5DBNA 5DBNB 1POIA 1POIB 1M3EA 3QDQA 1OOZA 2AHWA
chains in the Genus database with same CATH superfamily
3DLXA 1O9LA 1OOYA 1K6DA 1XR4A 3GK7A 3EH7A 2AHVA 3D3UA 2NRCA 3CDKA 4KGBA 3CDKB 3OXOA 1OPEA 2AHUA 3K6MA 3RRLA 2NRBA 2HJ0A 3RRLB 2OASA 5DBNA 5DBNB 1POIA 1POIB 1M3EA 3QDQA 1OOZA 2AHWA
chains in the Genus database with same CATH topology
3DLXA 1O9LA 1OOYA 1K6DA 1XR4A 3GK7A 3EH7A 2AHVA 3D3UA 2NRCA 3CDKA 4KGBA 3CDKB 3OXOA 1OPEA 2AHUA 3K6MA 3RRLA 2NRBA 2HJ0A 3RRLB 2OASA 5DBNA 5DBNB 1POIA 1POIB 1M3EA 3QDQA 1OOZA 2AHWA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3DLX A;  1O9L A;  1OOY A;  1K6D A;  1XR4 A;  3GK7 A;  3EH7 A;  2AHV A;  3D3U A;  2NRC A;  3CDK A;  4KGB A;  3CDK B;  3OXO A;  1OPE A;  2AHU A;  3K6M A;  3RRL A;  2NRB A;  2HJ0 A;  3RRL B;  2OAS A;  5DBN A;  5DBN B;  1POI A;  1POI B;  1M3E A;  3QDQ A;  1OOZ A;  2AHW A; 
#chains in the Genus database with same CATH topology
 3DLX A;  1O9L A;  1OOY A;  1K6D A;  1XR4 A;  3GK7 A;  3EH7 A;  2AHV A;  3D3U A;  2NRC A;  3CDK A;  4KGB A;  3CDK B;  3OXO A;  1OPE A;  2AHU A;  3K6M A;  3RRL A;  2NRB A;  2HJ0 A;  3RRL B;  2OAS A;  5DBN A;  5DBN B;  1POI A;  1POI B;  1M3E A;  3QDQ A;  1OOZ A;  2AHW A; 
#chains in the Genus database with same CATH homology
 3DLX A;  1O9L A;  1OOY A;  1K6D A;  1XR4 A;  3GK7 A;  3EH7 A;  2AHV A;  3D3U A;  2NRC A;  3CDK A;  4KGB A;  3CDK B;  3OXO A;  1OPE A;  2AHU A;  3K6M A;  3RRL A;  2NRB A;  2HJ0 A;  3RRL B;  2OAS A;  5DBN A;  5DBN B;  1POI A;  1POI B;  1M3E A;  3QDQ A;  1OOZ A;  2AHW A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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