1OYGA

Crystal structure of bacillus subtilis levansucrase
Total Genus 139
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
139
sequence length
440
structure length
440
Chain Sequence
QKPYKETYGISHITRHDMLQIPEQQKNEKYQVPEFDSSTIKNISSAKGLDVWDSWPLQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHYVEDKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKVMKPLIASNTVTDEIERANVFKMNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYKPLNKTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGFYADKQSTFAPSFLLNIKGKKTSVVKDSILEQGQLTVNK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
source organism Bacillus subtilis
publication title Structural framework of fructosyl transfer in Bacillus subtilis levansucrase
pubmed doi rcsb
molecule keywords levansucrase
total genus 139
structure length 440
sequence length 440
ec nomenclature ec 2.4.1.10: Levansucrase.
pdb deposition date 2003-04-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02435 Glyco_hydro_68 Levansucrase/Invertase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.115.10.20 Mainly Beta 5 Propeller Tachylectin-2; Chain A Glycosyl hydrolase domain; family 43 1oygA01
2YFRA 3AKIA 5C0PA 1W18A 3BYNA 1VKDA 5FMBA 5B6TA 3D60A 4MLGA 5GLRA 3U75A 5AY9A 2YFTA 3LIGA 3C7OA 4N2RA 3K1UA 4COTA 5JOWA 5FIXA 3ZXLA 3D5YA 4EQVA 4KCBA 1Y9MA 5B6SA 4FFGA 3NQHA 5GLKA 5JOZA 1GYDB 3WPYA 1OYGA 5JOXA 3LEMA 4AK7A 3VT1A 4O8PA 2EXJA 4UDKE 5A7VB 3R4ZA 3OM7A 4KCAA 3WPZA 2AC1A 3QEDA 2XQRA 3RWKX 2X8SA 3OM5A 1WL7A 3LV4A 2ADEA 3KF5A 2X8FA 3WN0A 5FMCA 3WMYA 5FLWA 1YRZA 3PIGA 5FKCA 3PIJA 3QZ4A 5GLOA 5ANNA 3UGFA 5A8DA 4FFHA 2ADDA 3R67A 4UDGA 2AEZA 2QQVA 2B4WA 2AEYA 4KMIA 3UGGA 4O8NA 2EXIA 5GLNA 3QEEA 3VSFA 2EXKA 4D47A 1Y4WA 3KSTA 3QEFA 3C7EA 4QQSA 5AYEA 4PVIA 1Y7BA 1YI7A 3VSZA 4O8OA 4KC8A 3C7GA 5FKBA 3AKHA 3VT2A 3OM2A 5JOYA 3LIHA 3WMZA 2QQUA 3D61A 4UDKA 4U6DA 1YIFA 3P2NA 3OM4A 5FMDA 5AYDA 2OXBA 4FFIA 3ZXKA 3CU9A 2QQWA 3WATA 3D5ZA 5FK8A 3LDKA 3WN2A 1UV4A 3WN1A 3VSSA 4AK5A 3WASA 5AYCA 3VSRA 4UDJA 3AKGA 3WAUA 1W2TA 3LF7A 3AKFA 3OM6A 3BYLA 1ST8A 3LDRA 5FK7A 5GLQA 5GLMA 4N1IA 4N4BA 4FFFA 3C7HA 3UGHA 3BYKA 4NOVA 2X8TA 2YFSA 3KF3A 4ONZA 3WPVA 1UYPA 2VDTA 5GLPA 3C7FA 1PT2A 4AK6A 3ZXJA 3QC2A 3LFIA 4PVAA 3C2UA 4U6BA 5A7VA 3SC7X 3U14A 3R4YA 1GYHA 3TAWA 4N2ZA 1Y9GA 3BYJA 4KC7A 3WPUA 1GYEB 5A8CA 2EXHA 5GLLA 3VT0A 4UDIA
chains in the Genus database with same CATH superfamily
2YFRA 3AKIA 5C0PA 1W18A 3BYNA 1VKDA 5FMBA 5B6TA 3D60A 4MLGA 5GLRA 3U75A 5AY9A 2YFTA 3LIGA 3C7OA 4N2RA 3K1UA 4COTA 5JOWA 5FIXA 3ZXLA 3D5YA 4EQVA 4KCBA 1Y9MA 5B6SA 4FFGA 3NQHA 5GLKA 5JOZA 1GYDB 3WPYA 1OYGA 5JOXA 3LEMA 4AK7A 3VT1A 4O8PA 2EXJA 4UDKE 5A7VB 3R4ZA 3OM7A 4KCAA 3WPZA 2AC1A 3QEDA 2XQRA 3RWKX 2X8SA 3OM5A 1WL7A 3LV4A 2ADEA 3KF5A 2X8FA 3WN0A 5FMCA 3WMYA 5FLWA 1YRZA 3PIGA 5FKCA 3PIJA 3QZ4A 5GLOA 5ANNA 3UGFA 5A8DA 4FFHA 2ADDA 3R67A 4UDGA 2AEZA 2QQVA 2B4WA 2AEYA 4KMIA 3UGGA 4O8NA 2EXIA 5GLNA 3QEEA 3VSFA 2EXKA 4D47A 1Y4WA 3KSTA 3QEFA 3C7EA 4QQSA 5AYEA 4PVIA 1Y7BA 1YI7A 3VSZA 4O8OA 4KC8A 3C7GA 5FKBA 3AKHA 3VT2A 3OM2A 5JOYA 3LIHA 3WMZA 5C2MA 2QQUA 3D61A 4UDKA 4U6DA 1YIFA 3P2NA 3OM4A 5FMDA 5AYDA 2OXBA 4FFIA 3ZXKA 3CU9A 2QQWA 3WATA 3D5ZA 5FK8A 3LDKA 3WN2A 1UV4A 3WN1A 3VSSA 4AK5A 3WASA 5AYCA 3VSRA 4UDJA 3AKGA 1TL2A 3WAUA 1W2TA 3LF7A 3AKFA 3OM6A 3BYLA 1ST8A 3LDRA 5FK7A 5GLQA 5GLMA 4N1IA 4N4BA 4FFFA 3C7HA 3UGHA 3BYKA 4NOVA 2X8TA 2YFSA 3KF3A 4ONZA 3WPVA 1UYPA 2VDTA 5GLPA 3C7FA 1PT2A 4AK6A 3ZXJA 3QC2A 3LFIA 4PVAA 3C2UA 4U6BA 5A7VA 3SC7X 3U14A 3R4YA 1GYHA 3TAWA 4N2ZA 1Y9GA 3BYJA 4KC7A 3WPUA 1GYEB 5A8CA 2EXHA 5GLLA 3VT0A 4UDIA
chains in the Genus database with same CATH topology
2YFRA 3AKIA 5C0PA 1W18A 3BYNA 1VKDA 5FMBA 5B6TA 3D60A 4MLGA 5GLRA 3U75A 5AY9A 2YFTA 3LIGA 3C7OA 4N2RA 3K1UA 4COTA 5JOWA 5FIXA 3ZXLA 3D5YA 4EQVA 4KCBA 1Y9MA 5B6SA 4FFGA 3NQHA 5GLKA 5JOZA 1GYDB 3WPYA 1OYGA 5JOXA 3LEMA 4AK7A 3VT1A 4O8PA 2EXJA 4UDKE 5A7VB 3R4ZA 3OM7A 4KCAA 3WPZA 2AC1A 3QEDA 2XQRA 3RWKX 2X8SA 3OM5A 1WL7A 3LV4A 2ADEA 3KF5A 2X8FA 3WN0A 5FMCA 3WMYA 5FLWA 1YRZA 3PIGA 5FKCA 3PIJA 3QZ4A 5GLOA 5ANNA 3UGFA 5A8DA 4FFHA 2ADDA 3R67A 4UDGA 2AEZA 2QQVA 2B4WA 2AEYA 4KMIA 3UGGA 4O8NA 2EXIA 5GLNA 3QEEA 3VSFA 2EXKA 4D47A 1Y4WA 3KSTA 3QEFA 3C7EA 4QQSA 5AYEA 4PVIA 1Y7BA 1YI7A 3VSZA 4O8OA 4KC8A 3C7GA 5FKBA 3AKHA 3VT2A 3OM2A 5JOYA 3LIHA 3WMZA 2QQUA 3D61A 4UDKA 4U6DA 1YIFA 3P2NA 3OM4A 5FMDA 5AYDA 2OXBA 4FFIA 3ZXKA 3CU9A 2QQWA 3WATA 3D5ZA 5FK8A 3LDKA 3WN2A 1UV4A 3WN1A 3VSSA 4AK5A 3WASA 5AYCA 3VSRA 4UDJA 3AKGA 3WAUA 1W2TA 3LF7A 3AKFA 3OM6A 3BYLA 1ST8A 3LDRA 5FK7A 5GLQA 5GLMA 4N1IA 4N4BA 4FFFA 3C7HA 3UGHA 3BYKA 4NOVA 2X8TA 2YFSA 3KF3A 4ONZA 3WPVA 1UYPA 2VDTA 5GLPA 3C7FA 1PT2A 4AK6A 3ZXJA 3QC2A 3LFIA 4PVAA 3C2UA 4U6BA 5A7VA 3SC7X 3U14A 3R4YA 1GYHA 3TAWA 4N2ZA 1Y9GA 3BYJA 4KC7A 3WPUA 1GYEB 5A8CA 2EXHA 5GLLA 3VT0A 4UDIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2YFR A;  3AKI A;  5C0P A;  1W18 A;  3BYN A;  1VKD A;  5FMB A;  5B6T A;  3D60 A;  4MLG A;  5GLR A;  3U75 A;  5AY9 A;  2YFT A;  3LIG A;  3C7O A;  4N2R A;  3K1U A;  4COT A;  5JOW A;  5FIX A;  3ZXL A;  3D5Y A;  4EQV A;  4KCB A;  1Y9M A;  5B6S A;  4FFG A;  3NQH A;  5GLK A;  5JOZ A;  1GYD B;  3WPY A;  1OYG A;  5JOX A;  3LEM A;  4AK7 A;  3VT1 A;  4O8P A;  2EXJ A;  4UDK E;  5A7V B;  3R4Z A;  3OM7 A;  4KCA A;  3WPZ A;  2AC1 A;  3QED A;  2XQR A;  3RWK X;  2X8S A;  3OM5 A;  1WL7 A;  3LV4 A;  2ADE A;  3KF5 A;  2X8F A;  3WN0 A;  5FMC A;  3WMY A;  5FLW A;  1YRZ A;  3PIG A;  5FKC A;  3PIJ A;  3QZ4 A;  5GLO A;  5ANN A;  3UGF A;  5A8D A;  4FFH A;  2ADD A;  3R67 A;  4UDG A;  2AEZ A;  2QQV A;  2B4W A;  2AEY A;  4KMI A;  3UGG A;  4O8N A;  2EXI A;  5GLN A;  3QEE A;  3VSF A;  2EXK A;  4D47 A;  1Y4W A;  3KST A;  3QEF A;  3C7E A;  4QQS A;  5AYE A;  4PVI A;  1Y7B A;  1YI7 A;  3VSZ A;  4O8O A;  4KC8 A;  3C7G A;  5FKB A;  3AKH A;  3VT2 A;  3OM2 A;  5JOY A;  3LIH A;  3WMZ A;  2QQU A;  3D61 A;  4UDK A;  4U6D A;  1YIF A;  3P2N A;  3OM4 A;  5FMD A;  5AYD A;  2OXB A;  4FFI A;  3ZXK A;  3CU9 A;  2QQW A;  3WAT A;  3D5Z A;  5FK8 A;  3LDK A;  3WN2 A;  1UV4 A;  3WN1 A;  3VSS A;  4AK5 A;  3WAS A;  5AYC A;  3VSR A;  4UDJ A;  3AKG A;  3WAU A;  1W2T A;  3LF7 A;  3AKF A;  3OM6 A;  3BYL A;  1ST8 A;  3LDR A;  5FK7 A;  5GLQ A;  5GLM A;  4N1I A;  4N4B A;  4FFF A;  3C7H A;  3UGH A;  3BYK A;  4NOV A;  2X8T A;  2YFS A;  3KF3 A;  4ONZ A;  3WPV A;  1UYP A;  2VDT A;  5GLP A;  3C7F A;  1PT2 A;  4AK6 A;  3ZXJ A;  3QC2 A;  3LFI A;  4PVA A;  3C2U A;  4U6B A;  5A7V A;  3SC7 X;  3U14 A;  3R4Y A;  1GYH A;  3TAW A;  4N2Z A;  1Y9G A;  3BYJ A;  4KC7 A;  3WPU A;  1GYE B;  5A8C A;  2EXH A;  5GLL A;  3VT0 A;  4UDI A; 
#chains in the Genus database with same CATH topology
 2YFR A;  3AKI A;  5C0P A;  1W18 A;  3BYN A;  1VKD A;  5FMB A;  5B6T A;  3D60 A;  4MLG A;  5GLR A;  3U75 A;  5AY9 A;  2YFT A;  3LIG A;  3C7O A;  4N2R A;  3K1U A;  4COT A;  5JOW A;  5FIX A;  3ZXL A;  3D5Y A;  4EQV A;  4KCB A;  1Y9M A;  5B6S A;  4FFG A;  3NQH A;  5GLK A;  5JOZ A;  1GYD B;  3WPY A;  1OYG A;  5JOX A;  3LEM A;  4AK7 A;  3VT1 A;  4O8P A;  2EXJ A;  4UDK E;  5A7V B;  3R4Z A;  3OM7 A;  4KCA A;  3WPZ A;  2AC1 A;  3QED A;  2XQR A;  3RWK X;  2X8S A;  3OM5 A;  1WL7 A;  3LV4 A;  2ADE A;  3KF5 A;  2X8F A;  3WN0 A;  5FMC A;  3WMY A;  5FLW A;  1YRZ A;  3PIG A;  5FKC A;  3PIJ A;  3QZ4 A;  5GLO A;  5ANN A;  3UGF A;  5A8D A;  4FFH A;  2ADD A;  3R67 A;  4UDG A;  2AEZ A;  2QQV A;  2B4W A;  2AEY A;  4KMI A;  3UGG A;  4O8N A;  2EXI A;  5GLN A;  3QEE A;  3VSF A;  2EXK A;  4D47 A;  1Y4W A;  3KST A;  3QEF A;  3C7E A;  4QQS A;  5AYE A;  4PVI A;  1Y7B A;  1YI7 A;  3VSZ A;  4O8O A;  4KC8 A;  3C7G A;  5FKB A;  3AKH A;  3VT2 A;  3OM2 A;  5JOY A;  3LIH A;  3WMZ A;  5C2M A;  2QQU A;  3D61 A;  4UDK A;  4U6D A;  1YIF A;  3P2N A;  3OM4 A;  5FMD A;  5AYD A;  2OXB A;  4FFI A;  3ZXK A;  3CU9 A;  2QQW A;  3WAT A;  3D5Z A;  5FK8 A;  3LDK A;  3WN2 A;  1UV4 A;  3WN1 A;  3VSS A;  4AK5 A;  3WAS A;  5AYC A;  3VSR A;  4UDJ A;  3AKG A;  1TL2 A;  3WAU A;  1W2T A;  3LF7 A;  3AKF A;  3OM6 A;  3BYL A;  1ST8 A;  3LDR A;  5FK7 A;  5GLQ A;  5GLM A;  4N1I A;  4N4B A;  4FFF A;  3C7H A;  3UGH A;  3BYK A;  4NOV A;  2X8T A;  2YFS A;  3KF3 A;  4ONZ A;  3WPV A;  1UYP A;  2VDT A;  5GLP A;  3C7F A;  1PT2 A;  4AK6 A;  3ZXJ A;  3QC2 A;  3LFI A;  4PVA A;  3C2U A;  4U6B A;  5A7V A;  3SC7 X;  3U14 A;  3R4Y A;  1GYH A;  3TAW A;  4N2Z A;  1Y9G A;  3BYJ A;  4KC7 A;  3WPU A;  1GYE B;  5A8C A;  2EXH A;  5GLL A;  3VT0 A;  4UDI A; 
#chains in the Genus database with same CATH homology
 2YFR A;  3AKI A;  5C0P A;  1W18 A;  3BYN A;  1VKD A;  5FMB A;  5B6T A;  3D60 A;  4MLG A;  5GLR A;  3U75 A;  5AY9 A;  2YFT A;  3LIG A;  3C7O A;  4N2R A;  3K1U A;  4COT A;  5JOW A;  5FIX A;  3ZXL A;  3D5Y A;  4EQV A;  4KCB A;  1Y9M A;  5B6S A;  4FFG A;  3NQH A;  5GLK A;  5JOZ A;  1GYD B;  3WPY A;  1OYG A;  5JOX A;  3LEM A;  4AK7 A;  3VT1 A;  4O8P A;  2EXJ A;  4UDK E;  5A7V B;  3R4Z A;  3OM7 A;  4KCA A;  3WPZ A;  2AC1 A;  3QED A;  2XQR A;  3RWK X;  2X8S A;  3OM5 A;  1WL7 A;  3LV4 A;  2ADE A;  3KF5 A;  2X8F A;  3WN0 A;  5FMC A;  3WMY A;  5FLW A;  1YRZ A;  3PIG A;  5FKC A;  3PIJ A;  3QZ4 A;  5GLO A;  5ANN A;  3UGF A;  5A8D A;  4FFH A;  2ADD A;  3R67 A;  4UDG A;  2AEZ A;  2QQV A;  2B4W A;  2AEY A;  4KMI A;  3UGG A;  4O8N A;  2EXI A;  5GLN A;  3QEE A;  3VSF A;  2EXK A;  4D47 A;  1Y4W A;  3KST A;  3QEF A;  3C7E A;  4QQS A;  5AYE A;  4PVI A;  1Y7B A;  1YI7 A;  3VSZ A;  4O8O A;  4KC8 A;  3C7G A;  5FKB A;  3AKH A;  3VT2 A;  3OM2 A;  5JOY A;  3LIH A;  3WMZ A;  2QQU A;  3D61 A;  4UDK A;  4U6D A;  1YIF A;  3P2N A;  3OM4 A;  5FMD A;  5AYD A;  2OXB A;  4FFI A;  3ZXK A;  3CU9 A;  2QQW A;  3WAT A;  3D5Z A;  5FK8 A;  3LDK A;  3WN2 A;  1UV4 A;  3WN1 A;  3VSS A;  4AK5 A;  3WAS A;  5AYC A;  3VSR A;  4UDJ A;  3AKG A;  3WAU A;  1W2T A;  3LF7 A;  3AKF A;  3OM6 A;  3BYL A;  1ST8 A;  3LDR A;  5FK7 A;  5GLQ A;  5GLM A;  4N1I A;  4N4B A;  4FFF A;  3C7H A;  3UGH A;  3BYK A;  4NOV A;  2X8T A;  2YFS A;  3KF3 A;  4ONZ A;  3WPV A;  1UYP A;  2VDT A;  5GLP A;  3C7F A;  1PT2 A;  4AK6 A;  3ZXJ A;  3QC2 A;  3LFI A;  4PVA A;  3C2U A;  4U6B A;  5A7V A;  3SC7 X;  3U14 A;  3R4Y A;  1GYH A;  3TAW A;  4N2Z A;  1Y9G A;  3BYJ A;  4KC7 A;  3WPU A;  1GYE B;  5A8C A;  2EXH A;  5GLL A;  3VT0 A;  4UDI A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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