1OZEA

Crystal structures of the ferric, ferrous, and ferrous-no forms of the asp140ala mutant of human heme oxygenase-1:catalytic implications
Total Genus 86
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
86
sequence length
214
structure length
214
Chain Sequence
PQDLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVALEEEIERNKESPVFAPVYFPEELHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVGRTEPELLVAHAYTRYLGALSGGQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQLYRSRMNSLEMTPAVRQRVIEEAKTAFLLNIQLFEELQELLTH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
molecule keywords Heme oxygenase 1
publication title Crystal structures of the ferric, ferrous, and ferrous-NO forms of the Asp140Ala mutant of human heme oxygenase-1: catalytic implications
pubmed doi rcsb
source organism Homo sapiens
total genus 86
structure length 214
sequence length 214
chains with identical sequence B
ec nomenclature ec 1.14.14.18: Heme oxygenase (biliverdin-producing).
pdb deposition date 2003-04-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01126 Heme_oxygenase Heme oxygenase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.910.10 Mainly Alpha Up-down Bundle Heme Oxygenase; Chain A Heme oxygenase-like 1ozeA00
1N3UA 3HNHA 5BTQA 1IW1A 4MECA 1SK7A 4WWJA 2GM8A 1YAFA 1N45A 2Q32A 3B5PA 2A2MA 2ZVUA 2Q4XA 4G7PA 1UDDA 1WE1A 4WD4A 1WWMA 3BJDA 1NI6A 4WWZA 3MOOA 1J02A 4G7LA 3DDEA 4G8PA 4WX0A 3I9UA 3K4FA 1OYKA 2GM7A 3B5OA 1OZWA 1Z72A 1XK1A 4G7UA 4RAJA 2A2OA 1IX4A 2RD3A 1WZDA 1YAKA 1S8CA 4G7TA 1UBBA 1DVGA 3IBXA 4FN6A 3HMLA 1TO9A 1IRMA 4GPFA 3NO6A 1T5PA 1OTVA 1OZEA 1DVEA 1RCWA 2F2GA 1TWNA 4GOHA 1V8XA 1J2CA 4WMHA 1WOVA 1S13A 1IVJA 1J77A 1OTWA 1TO9B 2DY5A 1XK2A 2E7EA 2A6BA 4G98A 3I8RA 2QZCA 3HLXA 4GPCA 1WOWA 1OZRA 4G8WA 1WOXA 4G99A 1VGIA 3HOKA 4NY7A 1RTWA 2RGZA 1XJZA 1XK0A 1P3UA 1P3VA 1TYHA 1ULXA 4GPHA 1TWRA 1OZLA 4LQXA 3OQLA 1WZFA 1OYLA 3MVUA 2QCXA 1WNWA 1IX3A 1WNXA 2QPPA 2Z68A 1WNVA 3CZYA 3I9TA 3RM5A 4G8UA 1IW0A 1WZGA 1XK3A 3TGMA 1P3TA
chains in the Genus database with same CATH superfamily
1N3UA 3HNHA 5BTQA 1IW1A 4MECA 1SK7A 4WWJA 2GM8A 2LCUA 1YAFA 1N45A 2Q32A 3B5PA 2A2MA 2ZVUA 2Q4XA 4G7PA 1UDDA 1WE1A 4WD4A 1WWMA 3BJDA 1NI6A 4WWZA 3MOOA 1J02A 4G7LA 3DDEA 4G8PA 4WX0A 3I9UA 3K4FA 1OYKA 2GM7A 3B5OA 1OZWA 1Z72A 1XK1A 4G7UA 4RAJA 2A2OA 1IX4A 2RD3A 1WZDA 1YAKA 1S8CA 4G7TA 1UBBA 1DVGA 3IBXA 4FN6A 3HMLA 1TO9A 1IRMA 4GPFA 3NO6A 1T5PA 1OTVA 1OZEA 1DVEA 1RCWA 2F2GA 1TWNA 4GOHA 1V8XA 1J2CA 4WMHA 1WOVA 1S13A 1IVJA 1J77A 1OTWA 1TO9B 2DY5A 1XK2A 2E7EA 2A6BA 4G98A 3I8RA 2QZCA 3HLXA 4GPCA 1WOWA 1OZRA 4G8WA 1WOXA 4G99A 1VGIA 3HOKA 4NY7A 1RTWA 2RGZA 1XJZA 1XK0A 1P3UA 1P3VA 1TYHA 1ULXA 4GPHA 1TWRA 1OZLA 4LQXA 3OQLA 1WZFA 1OYLA 3MVUA 2QCXA 1WNWA 1IX3A 1WNXA 2QPPA 2Z68A 1WNVA 3CZYA 3I9TA 3RM5A 4G8UA 1IW0A 1WZGA 1XK3A 3TGMA 1P3TA
chains in the Genus database with same CATH topology
1N3UA 3HNHA 5BTQA 1IW1A 4MECA 1SK7A 4WWJA 2GM8A 1YAFA 1N45A 2Q32A 3B5PA 2A2MA 2ZVUA 2Q4XA 4G7PA 1UDDA 1WE1A 4WD4A 1WWMA 3BJDA 1NI6A 4WWZA 3MOOA 1J02A 4G7LA 3DDEA 4G8PA 4WX0A 3I9UA 3K4FA 1OYKA 2GM7A 3B5OA 1OZWA 1Z72A 1XK1A 4G7UA 4RAJA 2A2OA 1IX4A 2RD3A 1WZDA 1YAKA 1S8CA 4G7TA 1UBBA 1DVGA 3IBXA 4FN6A 3HMLA 1TO9A 1IRMA 4GPFA 3NO6A 1T5PA 1OTVA 1OZEA 1DVEA 1RCWA 2F2GA 1TWNA 4GOHA 1V8XA 1J2CA 4WMHA 1WOVA 1S13A 1IVJA 1J77A 1OTWA 1TO9B 2DY5A 1XK2A 2E7EA 2A6BA 4G98A 3I8RA 2QZCA 3HLXA 4GPCA 1WOWA 1OZRA 4G8WA 1WOXA 4G99A 1VGIA 3HOKA 4NY7A 1RTWA 2RGZA 1XJZA 1XK0A 1P3UA 1P3VA 1TYHA 1ULXA 4GPHA 1TWRA 1OZLA 4LQXA 3OQLA 1WZFA 1OYLA 3MVUA 2QCXA 1WNWA 1IX3A 1WNXA 2QPPA 2Z68A 1WNVA 3CZYA 3I9TA 3RM5A 4G8UA 1IW0A 1WZGA 1XK3A 3TGMA 1P3TA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1N3U A;  3HNH A;  5BTQ A;  1IW1 A;  4MEC A;  1SK7 A;  4WWJ A;  2GM8 A;  1YAF A;  1N45 A;  2Q32 A;  3B5P A;  2A2M A;  2ZVU A;  2Q4X A;  4G7P A;  1UDD A;  1WE1 A;  4WD4 A;  1WWM A;  3BJD A;  1NI6 A;  4WWZ A;  3MOO A;  1J02 A;  4G7L A;  3DDE A;  4G8P A;  4WX0 A;  3I9U A;  3K4F A;  1OYK A;  2GM7 A;  3B5O A;  1OZW A;  1Z72 A;  1XK1 A;  4G7U A;  4RAJ A;  2A2O A;  1IX4 A;  2RD3 A;  1WZD A;  1YAK A;  1S8C A;  4G7T A;  1UBB A;  1DVG A;  3IBX A;  4FN6 A;  3HML A;  1TO9 A;  1IRM A;  4GPF A;  3NO6 A;  1T5P A;  1OTV A;  1OZE A;  1DVE A;  1RCW A;  2F2G A;  1TWN A;  4GOH A;  1V8X A;  1J2C A;  4WMH A;  1WOV A;  1S13 A;  1IVJ A;  1J77 A;  1OTW A;  1TO9 B;  2DY5 A;  1XK2 A;  2E7E A;  2A6B A;  4G98 A;  3I8R A;  2QZC A;  3HLX A;  4GPC A;  1WOW A;  1OZR A;  4G8W A;  1WOX A;  4G99 A;  1VGI A;  3HOK A;  4NY7 A;  1RTW A;  2RGZ A;  1XJZ A;  1XK0 A;  1P3U A;  1P3V A;  1TYH A;  1ULX A;  4GPH A;  1TWR A;  1OZL A;  4LQX A;  3OQL A;  1WZF A;  1OYL A;  3MVU A;  2QCX A;  1WNW A;  1IX3 A;  1WNX A;  2QPP A;  2Z68 A;  1WNV A;  3CZY A;  3I9T A;  3RM5 A;  4G8U A;  1IW0 A;  1WZG A;  1XK3 A;  3TGM A;  1P3T A; 
#chains in the Genus database with same CATH topology
 1N3U A;  3HNH A;  5BTQ A;  1IW1 A;  4MEC A;  1SK7 A;  4WWJ A;  2GM8 A;  2LCU A;  1YAF A;  1N45 A;  2Q32 A;  3B5P A;  2A2M A;  2ZVU A;  2Q4X A;  4G7P A;  1UDD A;  1WE1 A;  4WD4 A;  1WWM A;  3BJD A;  1NI6 A;  4WWZ A;  3MOO A;  1J02 A;  4G7L A;  3DDE A;  4G8P A;  4WX0 A;  3I9U A;  3K4F A;  1OYK A;  2GM7 A;  3B5O A;  1OZW A;  1Z72 A;  1XK1 A;  4G7U A;  4RAJ A;  2A2O A;  1IX4 A;  2RD3 A;  1WZD A;  1YAK A;  1S8C A;  4G7T A;  1UBB A;  1DVG A;  3IBX A;  4FN6 A;  3HML A;  1TO9 A;  1IRM A;  4GPF A;  3NO6 A;  1T5P A;  1OTV A;  1OZE A;  1DVE A;  1RCW A;  2F2G A;  1TWN A;  4GOH A;  1V8X A;  1J2C A;  4WMH A;  1WOV A;  1S13 A;  1IVJ A;  1J77 A;  1OTW A;  1TO9 B;  2DY5 A;  1XK2 A;  2E7E A;  2A6B A;  4G98 A;  3I8R A;  2QZC A;  3HLX A;  4GPC A;  1WOW A;  1OZR A;  4G8W A;  1WOX A;  4G99 A;  1VGI A;  3HOK A;  4NY7 A;  1RTW A;  2RGZ A;  1XJZ A;  1XK0 A;  1P3U A;  1P3V A;  1TYH A;  1ULX A;  4GPH A;  1TWR A;  1OZL A;  4LQX A;  3OQL A;  1WZF A;  1OYL A;  3MVU A;  2QCX A;  1WNW A;  1IX3 A;  1WNX A;  2QPP A;  2Z68 A;  1WNV A;  3CZY A;  3I9T A;  3RM5 A;  4G8U A;  1IW0 A;  1WZG A;  1XK3 A;  3TGM A;  1P3T A; 
#chains in the Genus database with same CATH homology
 1N3U A;  3HNH A;  5BTQ A;  1IW1 A;  4MEC A;  1SK7 A;  4WWJ A;  2GM8 A;  1YAF A;  1N45 A;  2Q32 A;  3B5P A;  2A2M A;  2ZVU A;  2Q4X A;  4G7P A;  1UDD A;  1WE1 A;  4WD4 A;  1WWM A;  3BJD A;  1NI6 A;  4WWZ A;  3MOO A;  1J02 A;  4G7L A;  3DDE A;  4G8P A;  4WX0 A;  3I9U A;  3K4F A;  1OYK A;  2GM7 A;  3B5O A;  1OZW A;  1Z72 A;  1XK1 A;  4G7U A;  4RAJ A;  2A2O A;  1IX4 A;  2RD3 A;  1WZD A;  1YAK A;  1S8C A;  4G7T A;  1UBB A;  1DVG A;  3IBX A;  4FN6 A;  3HML A;  1TO9 A;  1IRM A;  4GPF A;  3NO6 A;  1T5P A;  1OTV A;  1OZE A;  1DVE A;  1RCW A;  2F2G A;  1TWN A;  4GOH A;  1V8X A;  1J2C A;  4WMH A;  1WOV A;  1S13 A;  1IVJ A;  1J77 A;  1OTW A;  1TO9 B;  2DY5 A;  1XK2 A;  2E7E A;  2A6B A;  4G98 A;  3I8R A;  2QZC A;  3HLX A;  4GPC A;  1WOW A;  1OZR A;  4G8W A;  1WOX A;  4G99 A;  1VGI A;  3HOK A;  4NY7 A;  1RTW A;  2RGZ A;  1XJZ A;  1XK0 A;  1P3U A;  1P3V A;  1TYH A;  1ULX A;  4GPH A;  1TWR A;  1OZL A;  4LQX A;  3OQL A;  1WZF A;  1OYL A;  3MVU A;  2QCX A;  1WNW A;  1IX3 A;  1WNX A;  2QPP A;  2Z68 A;  1WNV A;  3CZY A;  3I9T A;  3RM5 A;  4G8U A;  1IW0 A;  1WZG A;  1XK3 A;  3TGM A;  1P3T A; 
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similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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