1P2KI

Structural consequences of accommodation of four non-cognate amino-acid residues in the s1 pocket of bovine trypsin and chymotrypsin
Total Genus 11
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
11
sequence length
58
structure length
58
Chain Sequence
RPDFCLEPPYTGPCVARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGGA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase/hydrolase inhibitor
molecule keywords Trypsinogen, cationic
publication title Structural consequences of accommodation of four non-cognate amino acid residues in the S1 pocket of bovine trypsin and chymotrypsin.
pubmed doi rcsb
source organism Bos taurus
total genus 11
structure length 58
sequence length 58
ec nomenclature
pdb deposition date 2003-04-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF00014 Kunitz_BPTI Kunitz/Bovine pancreatic trypsin inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
4.10.410.10 Few Secondary Structures Irregular Factor Xa Inhibitor Pancreatic trypsin inhibitor Kunitz domain 1p2kI00
3BTMI 2DDIA 3BTEI 1YC0I 3AUBA 3AUIA 1G6XA 7PTIA 3BTTI 4U32X 1T7CB 1P2II 1CA0D 1BZXI 2M99A 3AUCA 3TGJI 9PTIA 3D65I 1T8LB 4NTXB 1SHPA 2LFLA 2J6DA 3CI7A 1CBWD 3BTHI 1P2QB 1T8OB 1KUNA 1OA65 4WWYC 8PTIA 1ZJDB 3TGII 1T8NB 1BRCI 1QLQA 2KNTA 2IJOI 5JB4A 1BHCA 1BF0A 4ISLB 1Y62A 2TPII 1BPIA 1BTIA 1K6UA 1KIGI 6PTIA 4DTGK 1DENA 1TOCR 3BYBA 4BD9B 1F7ZI 3LDIA 1AAPA 1CO7I 1FAKI 4PTIA 1KTHA 2FTLI 1FANA 3BTGI 1F5RI 2M01A 2ODYE 3FP6I 1P2OB 2LFKA 1OA55 3AUEA 3P92E 1DTXA 3BTFI 1EAWB 4DG4C 3GYMI 1LD5A 1BIKA 3WNYA 1IRHA 1UUAA 3UOUB 1JV8A 1DEMA 2ZVXA 3M7QB 1BUNB 1P2NB 2FI4I 3AUHA 1UUBA 1AALA 4U30W 2KCRA 3LDMA 2PTCI 2JOTA 4ISNB 1KNTA 4Y0ZI 1DTKA 2DDJA 1BRBI 2ZJXA 3BTDI 2RA3C 5C67C 1JC6A 1D0DB 1NAGA 4BQDA 1P2JI 1ZR0B 1EJMB 1BPTA 3LDJA 3BTQI 3TGKI 3U1JE 4BNRI 3AUGA 2UUYB 4ISOB 3L3TE 1P2MB 2R9PE 3TPII 1MTND 3FP7J 3UIRC 4TPII 4Y10I 1TPAI 4WXVC 5JB6A 1TFXC 3T62D 1FY8I 2UUXA 2FI3I 1B0CA 5JB7A 1JV9A 3OFWA 1YLCB 4Y0YI 4NTYB 1YLDB 1TAPA 3FP8I 2CA7A 2TGPI 5JB5A 2KAII 4NTWB 3BTKI 1PITA 2FI5I 1D0DA 3AUDA 1LD6A 1P2KI 3BTWI 2HEXA 1T8MB 2W8XA 3P95E 1ADZA 3OTJI 3L33E 1TAWB 2FTMB 1BZ5A 4Y11I 1YKTB 5PTIA 1TCPA 1BTHP
chains in the Genus database with same CATH superfamily
3BTMI 2DDIA 3BTEI 1YC0I 3AUBA 3AUIA 1G6XA 7PTIA 3BTTI 4U32X 1T7CB 1P2II 1CA0D 1BZXI 2M99A 3AUCA 3TGJI 9PTIA 3D65I 1T8LB 4NTXB 1SHPA 2LFLA 2J6DA 3CI7A 1CBWD 3BTHI 1P2QB 1T8OB 1KUNA 1OA65 4WWYC 8PTIA 1ZJDB 3TGII 1T8NB 1BRCI 1QLQA 2KNTA 2IJOI 5JB4A 1BHCA 1BF0A 4ISLB 1Y62A 2TPII 1BPIA 1BTIA 1K6UA 1KIGI 6PTIA 4DTGK 1DENA 1TOCR 3BYBA 4BD9B 1F7ZI 3LDIA 1AAPA 1CO7I 1FAKI 4PTIA 1KTHA 2FTLI 1FANA 3BTGI 1F5RI 2M01A 2ODYE 3FP6I 1P2OB 2LFKA 1OA55 3AUEA 3P92E 1DTXA 3BTFI 1EAWB 4DG4C 3GYMI 1LD5A 1BIKA 3WNYA 1IRHA 1UUAA 3UOUB 1JV8A 1DEMA 2ZVXA 3M7QB 1BUNB 1P2NB 2FI4I 3AUHA 1UUBA 1AALA 4U30W 2KCRA 3LDMA 2PTCI 2JOTA 4ISNB 1KNTA 4Y0ZI 1DTKA 2DDJA 1BRBI 2ZJXA 3BTDI 2RA3C 5C67C 1JC6A 1D0DB 1NAGA 4BQDA 1P2JI 1ZR0B 1EJMB 1BPTA 3LDJA 3BTQI 3TGKI 3U1JE 4BNRI 3AUGA 2UUYB 4ISOB 3L3TE 1P2MB 2R9PE 3TPII 1MTND 3FP7J 3UIRC 4TPII 4Y10I 1TPAI 4WXVC 5JB6A 1TFXC 3T62D 1FY8I 2UUXA 2FI3I 1B0CA 5JB7A 1JV9A 3OFWA 1YLCB 4Y0YI 4NTYB 1YLDB 1TAPA 3FP8I 2CA7A 2TGPI 5JB5A 2KAII 4NTWB 3BTKI 1PITA 2FI5I 1D0DA 3AUDA 1LD6A 1P2KI 3BTWI 2HEXA 1T8MB 2W8XA 3P95E 1ADZA 3OTJI 3L33E 1TAWB 2FTMB 1BZ5A 4Y11I 1YKTB 5PTIA 1TCPA 1BTHP
chains in the Genus database with same CATH topology
3BTMI 2DDIA 3BTEI 1YC0I 3AUBA 3AUIA 1G6XA 7PTIA 3BTTI 4U32X 1T7CB 1P2II 1CA0D 1BZXI 2M99A 3AUCA 3TGJI 9PTIA 3D65I 1T8LB 4NTXB 1SHPA 2LFLA 2J6DA 3CI7A 1CBWD 3BTHI 1P2QB 1T8OB 1KUNA 1OA65 4WWYC 8PTIA 1ZJDB 3TGII 1T8NB 1BRCI 1QLQA 2KNTA 2IJOI 5JB4A 1BHCA 1BF0A 4ISLB 1Y62A 2TPII 1BPIA 1BTIA 1K6UA 1KIGI 6PTIA 4DTGK 1DENA 1TOCR 3BYBA 4BD9B 1F7ZI 3LDIA 1AAPA 1CO7I 1FAKI 4PTIA 1KTHA 2FTLI 1FANA 3BTGI 1F5RI 2M01A 2ODYE 3FP6I 1P2OB 2LFKA 1OA55 3AUEA 3P92E 1DTXA 3BTFI 1EAWB 4DG4C 3GYMI 1LD5A 1BIKA 3WNYA 1IRHA 1UUAA 3UOUB 1JV8A 1DEMA 2ZVXA 3M7QB 1BUNB 1P2NB 2FI4I 3AUHA 1UUBA 1AALA 4U30W 2KCRA 3LDMA 2PTCI 2JOTA 4ISNB 1KNTA 4Y0ZI 1DTKA 2DDJA 1BRBI 2ZJXA 3BTDI 2RA3C 5C67C 1JC6A 1D0DB 1NAGA 4BQDA 1P2JI 1ZR0B 1EJMB 1BPTA 3LDJA 3BTQI 3TGKI 3U1JE 4BNRI 3AUGA 2UUYB 4ISOB 3L3TE 1P2MB 2R9PE 3TPII 1MTND 3FP7J 3UIRC 4TPII 4Y10I 1TPAI 4WXVC 5JB6A 1TFXC 3T62D 1FY8I 2UUXA 2FI3I 1B0CA 5JB7A 1JV9A 3OFWA 1YLCB 4Y0YI 4NTYB 1YLDB 1TAPA 3FP8I 2CA7A 2TGPI 5JB5A 2KAII 4NTWB 3BTKI 1PITA 2FI5I 1D0DA 3AUDA 1LD6A 1P2KI 3BTWI 2HEXA 1T8MB 2W8XA 3P95E 1ADZA 3OTJI 3L33E 1TAWB 2FTMB 1BZ5A 4Y11I 1YKTB 5PTIA 1TCPA 1BTHP
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3BTM I;  2DDI A;  3BTE I;  1YC0 I;  3AUB A;  3AUI A;  1G6X A;  7PTI A;  3BTT I;  4U32 X;  1T7C B;  1P2I I;  1CA0 D;  1BZX I;  2M99 A;  3AUC A;  3TGJ I;  9PTI A;  3D65 I;  1T8L B;  4NTX B;  1SHP A;  2LFL A;  2J6D A;  3CI7 A;  1CBW D;  3BTH I;  1P2Q B;  1T8O B;  1KUN A;  1OA6 5;  4WWY C;  8PTI A;  1ZJD B;  3TGI I;  1T8N B;  1BRC I;  1QLQ A;  2KNT A;  2IJO I;  5JB4 A;  1BHC A;  1BF0 A;  4ISL B;  1Y62 A;  2TPI I;  1BPI A;  1BTI A;  1K6U A;  1KIG I;  6PTI A;  4DTG K;  1DEN A;  1TOC R;  3BYB A;  4BD9 B;  1F7Z I;  3LDI A;  1AAP A;  1CO7 I;  1FAK I;  4PTI A;  1KTH A;  2FTL I;  1FAN A;  3BTG I;  1F5R I;  2M01 A;  2ODY E;  3FP6 I;  1P2O B;  2LFK A;  1OA5 5;  3AUE A;  3P92 E;  1DTX A;  3BTF I;  1EAW B;  4DG4 C;  3GYM I;  1LD5 A;  1BIK A;  3WNY A;  1IRH A;  1UUA A;  3UOU B;  1JV8 A;  1DEM A;  2ZVX A;  3M7Q B;  1BUN B;  1P2N B;  2FI4 I;  3AUH A;  1UUB A;  1AAL A;  4U30 W;  2KCR A;  3LDM A;  2PTC I;  2JOT A;  4ISN B;  1KNT A;  4Y0Z I;  1DTK A;  2DDJ A;  1BRB I;  2ZJX A;  3BTD I;  2RA3 C;  5C67 C;  1JC6 A;  1D0D B;  1NAG A;  4BQD A;  1P2J I;  1ZR0 B;  1EJM B;  1BPT A;  3LDJ A;  3BTQ I;  3TGK I;  3U1J E;  4BNR I;  3AUG A;  2UUY B;  4ISO B;  3L3T E;  1P2M B;  2R9P E;  3TPI I;  1MTN D;  3FP7 J;  3UIR C;  4TPI I;  4Y10 I;  1TPA I;  4WXV C;  5JB6 A;  1TFX C;  3T62 D;  1FY8 I;  2UUX A;  2FI3 I;  1B0C A;  5JB7 A;  1JV9 A;  3OFW A;  1YLC B;  4Y0Y I;  4NTY B;  1YLD B;  1TAP A;  3FP8 I;  2CA7 A;  2TGP I;  5JB5 A;  2KAI I;  4NTW B;  3BTK I;  1PIT A;  2FI5 I;  1D0D A;  3AUD A;  1LD6 A;  1P2K I;  3BTW I;  2HEX A;  1T8M B;  2W8X A;  3P95 E;  1ADZ A;  3OTJ I;  3L33 E;  1TAW B;  2FTM B;  1BZ5 A;  4Y11 I;  1YKT B;  5PTI A;  1TCP A;  1BTH P; 
#chains in the Genus database with same CATH topology
 3BTM I;  2DDI A;  3BTE I;  1YC0 I;  3AUB A;  3AUI A;  1G6X A;  7PTI A;  3BTT I;  4U32 X;  1T7C B;  1P2I I;  1CA0 D;  1BZX I;  2M99 A;  3AUC A;  3TGJ I;  9PTI A;  3D65 I;  1T8L B;  4NTX B;  1SHP A;  2LFL A;  2J6D A;  3CI7 A;  1CBW D;  3BTH I;  1P2Q B;  1T8O B;  1KUN A;  1OA6 5;  4WWY C;  8PTI A;  1ZJD B;  3TGI I;  1T8N B;  1BRC I;  1QLQ A;  2KNT A;  2IJO I;  5JB4 A;  1BHC A;  1BF0 A;  4ISL B;  1Y62 A;  2TPI I;  1BPI A;  1BTI A;  1K6U A;  1KIG I;  6PTI A;  4DTG K;  1DEN A;  1TOC R;  3BYB A;  4BD9 B;  1F7Z I;  3LDI A;  1AAP A;  1CO7 I;  1FAK I;  4PTI A;  1KTH A;  2FTL I;  1FAN A;  3BTG I;  1F5R I;  2M01 A;  2ODY E;  3FP6 I;  1P2O B;  2LFK A;  1OA5 5;  3AUE A;  3P92 E;  1DTX A;  3BTF I;  1EAW B;  4DG4 C;  3GYM I;  1LD5 A;  1BIK A;  3WNY A;  1IRH A;  1UUA A;  3UOU B;  1JV8 A;  1DEM A;  2ZVX A;  3M7Q B;  1BUN B;  1P2N B;  2FI4 I;  3AUH A;  1UUB A;  1AAL A;  4U30 W;  2KCR A;  3LDM A;  2PTC I;  2JOT A;  4ISN B;  1KNT A;  4Y0Z I;  1DTK A;  2DDJ A;  1BRB I;  2ZJX A;  3BTD I;  2RA3 C;  5C67 C;  1JC6 A;  1D0D B;  1NAG A;  4BQD A;  1P2J I;  1ZR0 B;  1EJM B;  1BPT A;  3LDJ A;  3BTQ I;  3TGK I;  3U1J E;  4BNR I;  3AUG A;  2UUY B;  4ISO B;  3L3T E;  1P2M B;  2R9P E;  3TPI I;  1MTN D;  3FP7 J;  3UIR C;  4TPI I;  4Y10 I;  1TPA I;  4WXV C;  5JB6 A;  1TFX C;  3T62 D;  1FY8 I;  2UUX A;  2FI3 I;  1B0C A;  5JB7 A;  1JV9 A;  3OFW A;  1YLC B;  4Y0Y I;  4NTY B;  1YLD B;  1TAP A;  3FP8 I;  2CA7 A;  2TGP I;  5JB5 A;  2KAI I;  4NTW B;  3BTK I;  1PIT A;  2FI5 I;  1D0D A;  3AUD A;  1LD6 A;  1P2K I;  3BTW I;  2HEX A;  1T8M B;  2W8X A;  3P95 E;  1ADZ A;  3OTJ I;  3L33 E;  1TAW B;  2FTM B;  1BZ5 A;  4Y11 I;  1YKT B;  5PTI A;  1TCP A;  1BTH P; 
#chains in the Genus database with same CATH homology
 3BTM I;  2DDI A;  3BTE I;  1YC0 I;  3AUB A;  3AUI A;  1G6X A;  7PTI A;  3BTT I;  4U32 X;  1T7C B;  1P2I I;  1CA0 D;  1BZX I;  2M99 A;  3AUC A;  3TGJ I;  9PTI A;  3D65 I;  1T8L B;  4NTX B;  1SHP A;  2LFL A;  2J6D A;  3CI7 A;  1CBW D;  3BTH I;  1P2Q B;  1T8O B;  1KUN A;  1OA6 5;  4WWY C;  8PTI A;  1ZJD B;  3TGI I;  1T8N B;  1BRC I;  1QLQ A;  2KNT A;  2IJO I;  5JB4 A;  1BHC A;  1BF0 A;  4ISL B;  1Y62 A;  2TPI I;  1BPI A;  1BTI A;  1K6U A;  1KIG I;  6PTI A;  4DTG K;  1DEN A;  1TOC R;  3BYB A;  4BD9 B;  1F7Z I;  3LDI A;  1AAP A;  1CO7 I;  1FAK I;  4PTI A;  1KTH A;  2FTL I;  1FAN A;  3BTG I;  1F5R I;  2M01 A;  2ODY E;  3FP6 I;  1P2O B;  2LFK A;  1OA5 5;  3AUE A;  3P92 E;  1DTX A;  3BTF I;  1EAW B;  4DG4 C;  3GYM I;  1LD5 A;  1BIK A;  3WNY A;  1IRH A;  1UUA A;  3UOU B;  1JV8 A;  1DEM A;  2ZVX A;  3M7Q B;  1BUN B;  1P2N B;  2FI4 I;  3AUH A;  1UUB A;  1AAL A;  4U30 W;  2KCR A;  3LDM A;  2PTC I;  2JOT A;  4ISN B;  1KNT A;  4Y0Z I;  1DTK A;  2DDJ A;  1BRB I;  2ZJX A;  3BTD I;  2RA3 C;  5C67 C;  1JC6 A;  1D0D B;  1NAG A;  4BQD A;  1P2J I;  1ZR0 B;  1EJM B;  1BPT A;  3LDJ A;  3BTQ I;  3TGK I;  3U1J E;  4BNR I;  3AUG A;  2UUY B;  4ISO B;  3L3T E;  1P2M B;  2R9P E;  3TPI I;  1MTN D;  3FP7 J;  3UIR C;  4TPI I;  4Y10 I;  1TPA I;  4WXV C;  5JB6 A;  1TFX C;  3T62 D;  1FY8 I;  2UUX A;  2FI3 I;  1B0C A;  5JB7 A;  1JV9 A;  3OFW A;  1YLC B;  4Y0Y I;  4NTY B;  1YLD B;  1TAP A;  3FP8 I;  2CA7 A;  2TGP I;  5JB5 A;  2KAI I;  4NTW B;  3BTK I;  1PIT A;  2FI5 I;  1D0D A;  3AUD A;  1LD6 A;  1P2K I;  3BTW I;  2HEX A;  1T8M B;  2W8X A;  3P95 E;  1ADZ A;  3OTJ I;  3L33 E;  1TAW B;  2FTM B;  1BZ5 A;  4Y11 I;  1YKT B;  5PTI A;  1TCP A;  1BTH P; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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