1P3TA

Crystal structures of the no-and co-bound heme oxygenase from neisseria meningitidis: implications for oxygen activation
Total Genus 69
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
69
sequence length
199
structure length
199
Chain Sequence
ALTFAKRLKADTTAVHDSVDNLVMSVQPFVSKENYIKFLKLQSVFHKAVDHIYKDAELNKAIPELEYMARYDAVTQDLKDLGEEPYKFDKELPYEAGNKAIGWLYCAEGSNLGAAFLFKHAQKLDYNGEHGARHLAPHPDGRGKHWRAFVEHLNALNLTPEAEAEAIQGAREAFAFYKVVLRETFGLAADAEAPEGMMP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
molecule keywords Heme oxygenase 1
publication title Crystal structures of the NO- and CO-bound heme oxygenase from Neisseriae meningitidis. Implications for O2 activation
pubmed doi rcsb
source organism Neisseria meningitidis
total genus 69
structure length 199
sequence length 199
ec nomenclature ec 1.14.99.3: Transferred entry: 1.14.14.18.
pdb deposition date 2003-04-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01126 Heme_oxygenase Heme oxygenase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.910.10 Mainly Alpha Up-down Bundle Heme Oxygenase; Chain A Heme oxygenase-like 1p3tA00
4G7TA 2GM8A 1TWRA 3I8RA 2ZVUA 1WNXA 1IX4A 1SK7A 4G8WA 2A2OA 4MECA 3NO6A 1WNVA 1N45A 1OTVA 1VGIA 1OYLA 2DY5A 5BTQA 2RD3A 1IX3A 1IVJA 3HNHA 3MOOA 4GOHA 4WX0A 1OZEA 4G7LA 1J2CA 1TO9B 2E7EA 1P3TA 3HLXA 3TGMA 3OQLA 4GPCA 1S8CA 1XK0A 1V8XA 2Z68A 2F2GA 3HOKA 1T5PA 1OZWA 2RGZA 4WD4A 3HMLA 4GPFA 2GM7A 1WZGA 1P3VA 1RCWA 1ULXA 4G7PA 1Z72A 4G8UA 1J77A 4G7UA 4G8PA 4WMHA 1IRMA 1UDDA 4WWJA 1TO9A 1DVGA 1RTWA 2A2MA 3I9UA 1TWNA 4NY7A 2QPPA 3K4FA 1NI6A 3BJDA 3IBXA 1P3UA 1WZFA 3MVUA 2QZCA 1S13A 1XK3A 3B5OA 3RM5A 4LQXA 1WOVA 3I9TA 1OTWA 4FN6A 1TYHA 3DDEA 1UBBA 1OZLA 2A6BA 3CZYA 2QCXA 3B5PA 4WWZA 1WZDA 2Q4XA 4RAJA 1WNWA 1XK2A 4GPHA 1YAFA 1IW1A 1OYKA 1OZRA 1WE1A 4G99A 1XJZA 1XK1A 1DVEA 1YAKA 1N3UA 1J02A 1IW0A 2Q32A 4G98A 1WWMA 1WOXA 1WOWA
chains in the Genus database with same CATH superfamily
4G7TA 2GM8A 1TWRA 3I8RA 2ZVUA 1WNXA 1IX4A 1SK7A 4G8WA 2A2OA 4MECA 3NO6A 1WNVA 1N45A 1OTVA 1VGIA 1OYLA 2DY5A 5BTQA 2RD3A 1IX3A 1IVJA 3HNHA 3MOOA 4GOHA 4WX0A 1OZEA 4G7LA 1J2CA 1TO9B 2E7EA 1P3TA 3HLXA 3TGMA 3OQLA 4GPCA 1S8CA 1XK0A 1V8XA 2Z68A 2F2GA 3HOKA 1T5PA 1OZWA 2RGZA 4WD4A 3HMLA 4GPFA 2GM7A 1WZGA 1P3VA 1RCWA 1ULXA 4G7PA 1Z72A 4G8UA 1J77A 4G7UA 4G8PA 4WMHA 1IRMA 1UDDA 4WWJA 1TO9A 1DVGA 1RTWA 2A2MA 3I9UA 1TWNA 4NY7A 2QPPA 3K4FA 1NI6A 3BJDA 3IBXA 1P3UA 1WZFA 3MVUA 2QZCA 1S13A 1XK3A 3B5OA 3RM5A 4LQXA 1WOVA 3I9TA 1OTWA 4FN6A 1TYHA 3DDEA 1UBBA 1OZLA 2A6BA 3CZYA 2QCXA 3B5PA 4WWZA 1WZDA 2Q4XA 4RAJA 1WNWA 1XK2A 4GPHA 1YAFA 1IW1A 1OYKA 1OZRA 1WE1A 4G99A 1XJZA 1XK1A 1DVEA 2LCUA 1YAKA 1N3UA 1J02A 1IW0A 2Q32A 4G98A 1WWMA 1WOXA 1WOWA
chains in the Genus database with same CATH topology
4G7TA 2GM8A 1TWRA 3I8RA 2ZVUA 1WNXA 1IX4A 1SK7A 4G8WA 2A2OA 4MECA 3NO6A 1WNVA 1N45A 1OTVA 1VGIA 1OYLA 2DY5A 5BTQA 2RD3A 1IX3A 1IVJA 3HNHA 3MOOA 4GOHA 4WX0A 1OZEA 4G7LA 1J2CA 1TO9B 2E7EA 1P3TA 3HLXA 3TGMA 3OQLA 4GPCA 1S8CA 1XK0A 1V8XA 2Z68A 2F2GA 3HOKA 1T5PA 1OZWA 2RGZA 4WD4A 3HMLA 4GPFA 2GM7A 1WZGA 1P3VA 1RCWA 1ULXA 4G7PA 1Z72A 4G8UA 1J77A 4G7UA 4G8PA 4WMHA 1IRMA 1UDDA 4WWJA 1TO9A 1DVGA 1RTWA 2A2MA 3I9UA 1TWNA 4NY7A 2QPPA 3K4FA 1NI6A 3BJDA 3IBXA 1P3UA 1WZFA 3MVUA 2QZCA 1S13A 1XK3A 3B5OA 3RM5A 4LQXA 1WOVA 3I9TA 1OTWA 4FN6A 1TYHA 3DDEA 1UBBA 1OZLA 2A6BA 3CZYA 2QCXA 3B5PA 4WWZA 1WZDA 2Q4XA 4RAJA 1WNWA 1XK2A 4GPHA 1YAFA 1IW1A 1OYKA 1OZRA 1WE1A 4G99A 1XJZA 1XK1A 1DVEA 1YAKA 1N3UA 1J02A 1IW0A 2Q32A 4G98A 1WWMA 1WOXA 1WOWA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4G7T A;  2GM8 A;  1TWR A;  3I8R A;  2ZVU A;  1WNX A;  1IX4 A;  1SK7 A;  4G8W A;  2A2O A;  4MEC A;  3NO6 A;  1WNV A;  1N45 A;  1OTV A;  1VGI A;  1OYL A;  2DY5 A;  5BTQ A;  2RD3 A;  1IX3 A;  1IVJ A;  3HNH A;  3MOO A;  4GOH A;  4WX0 A;  1OZE A;  4G7L A;  1J2C A;  1TO9 B;  2E7E A;  1P3T A;  3HLX A;  3TGM A;  3OQL A;  4GPC A;  1S8C A;  1XK0 A;  1V8X A;  2Z68 A;  2F2G A;  3HOK A;  1T5P A;  1OZW A;  2RGZ A;  4WD4 A;  3HML A;  4GPF A;  2GM7 A;  1WZG A;  1P3V A;  1RCW A;  1ULX A;  4G7P A;  1Z72 A;  4G8U A;  1J77 A;  4G7U A;  4G8P A;  4WMH A;  1IRM A;  1UDD A;  4WWJ A;  1TO9 A;  1DVG A;  1RTW A;  2A2M A;  3I9U A;  1TWN A;  4NY7 A;  2QPP A;  3K4F A;  1NI6 A;  3BJD A;  3IBX A;  1P3U A;  1WZF A;  3MVU A;  2QZC A;  1S13 A;  1XK3 A;  3B5O A;  3RM5 A;  4LQX A;  1WOV A;  3I9T A;  1OTW A;  4FN6 A;  1TYH A;  3DDE A;  1UBB A;  1OZL A;  2A6B A;  3CZY A;  2QCX A;  3B5P A;  4WWZ A;  1WZD A;  2Q4X A;  4RAJ A;  1WNW A;  1XK2 A;  4GPH A;  1YAF A;  1IW1 A;  1OYK A;  1OZR A;  1WE1 A;  4G99 A;  1XJZ A;  1XK1 A;  1DVE A;  1YAK A;  1N3U A;  1J02 A;  1IW0 A;  2Q32 A;  4G98 A;  1WWM A;  1WOX A;  1WOW A; 
#chains in the Genus database with same CATH topology
 4G7T A;  2GM8 A;  1TWR A;  3I8R A;  2ZVU A;  1WNX A;  1IX4 A;  1SK7 A;  4G8W A;  2A2O A;  4MEC A;  3NO6 A;  1WNV A;  1N45 A;  1OTV A;  1VGI A;  1OYL A;  2DY5 A;  5BTQ A;  2RD3 A;  1IX3 A;  1IVJ A;  3HNH A;  3MOO A;  4GOH A;  4WX0 A;  1OZE A;  4G7L A;  1J2C A;  1TO9 B;  2E7E A;  1P3T A;  3HLX A;  3TGM A;  3OQL A;  4GPC A;  1S8C A;  1XK0 A;  1V8X A;  2Z68 A;  2F2G A;  3HOK A;  1T5P A;  1OZW A;  2RGZ A;  4WD4 A;  3HML A;  4GPF A;  2GM7 A;  1WZG A;  1P3V A;  1RCW A;  1ULX A;  4G7P A;  1Z72 A;  4G8U A;  1J77 A;  4G7U A;  4G8P A;  4WMH A;  1IRM A;  1UDD A;  4WWJ A;  1TO9 A;  1DVG A;  1RTW A;  2A2M A;  3I9U A;  1TWN A;  4NY7 A;  2QPP A;  3K4F A;  1NI6 A;  3BJD A;  3IBX A;  1P3U A;  1WZF A;  3MVU A;  2QZC A;  1S13 A;  1XK3 A;  3B5O A;  3RM5 A;  4LQX A;  1WOV A;  3I9T A;  1OTW A;  4FN6 A;  1TYH A;  3DDE A;  1UBB A;  1OZL A;  2A6B A;  3CZY A;  2QCX A;  3B5P A;  4WWZ A;  1WZD A;  2Q4X A;  4RAJ A;  1WNW A;  1XK2 A;  4GPH A;  1YAF A;  1IW1 A;  1OYK A;  1OZR A;  1WE1 A;  4G99 A;  1XJZ A;  1XK1 A;  1DVE A;  2LCU A;  1YAK A;  1N3U A;  1J02 A;  1IW0 A;  2Q32 A;  4G98 A;  1WWM A;  1WOX A;  1WOW A; 
#chains in the Genus database with same CATH homology
 4G7T A;  2GM8 A;  1TWR A;  3I8R A;  2ZVU A;  1WNX A;  1IX4 A;  1SK7 A;  4G8W A;  2A2O A;  4MEC A;  3NO6 A;  1WNV A;  1N45 A;  1OTV A;  1VGI A;  1OYL A;  2DY5 A;  5BTQ A;  2RD3 A;  1IX3 A;  1IVJ A;  3HNH A;  3MOO A;  4GOH A;  4WX0 A;  1OZE A;  4G7L A;  1J2C A;  1TO9 B;  2E7E A;  1P3T A;  3HLX A;  3TGM A;  3OQL A;  4GPC A;  1S8C A;  1XK0 A;  1V8X A;  2Z68 A;  2F2G A;  3HOK A;  1T5P A;  1OZW A;  2RGZ A;  4WD4 A;  3HML A;  4GPF A;  2GM7 A;  1WZG A;  1P3V A;  1RCW A;  1ULX A;  4G7P A;  1Z72 A;  4G8U A;  1J77 A;  4G7U A;  4G8P A;  4WMH A;  1IRM A;  1UDD A;  4WWJ A;  1TO9 A;  1DVG A;  1RTW A;  2A2M A;  3I9U A;  1TWN A;  4NY7 A;  2QPP A;  3K4F A;  1NI6 A;  3BJD A;  3IBX A;  1P3U A;  1WZF A;  3MVU A;  2QZC A;  1S13 A;  1XK3 A;  3B5O A;  3RM5 A;  4LQX A;  1WOV A;  3I9T A;  1OTW A;  4FN6 A;  1TYH A;  3DDE A;  1UBB A;  1OZL A;  2A6B A;  3CZY A;  2QCX A;  3B5P A;  4WWZ A;  1WZD A;  2Q4X A;  4RAJ A;  1WNW A;  1XK2 A;  4GPH A;  1YAF A;  1IW1 A;  1OYK A;  1OZR A;  1WE1 A;  4G99 A;  1XJZ A;  1XK1 A;  1DVE A;  1YAK A;  1N3U A;  1J02 A;  1IW0 A;  2Q32 A;  4G98 A;  1WWM A;  1WOX A;  1WOW A; 
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