1P8XA

The calcium-activated c-terminal half of gelsolin
Total Genus 96
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
96
sequence length
330
structure length
316
Chain Sequence
MDDDGTGQKQIWRIEGSNKVPVDPATYGQFYGGDSYIILYNYRHGGRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTSREGGQTAPASTRLFQVRANSAGATRAVEVLPKAGALNSNDAFVLKTPSAAYLWVGTGASEAEKTGAQELLRVLRAQPVQVAEGSEPDGFWEALGGKAAYRTSPRLKDKKMHPPRLFACEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKTEALTSAKRYIETDNRDRRTPITVVKQGFEPPSFVGWFLGWDDDYW
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Structural protein
molecule keywords Gelsolin precursor, plasma
publication title Activation in isolation: Exposure of the actin-binding site in the C-terminal half of gelsolin does not require actin
pubmed doi rcsb
source organism Homo sapiens
total genus 96
structure length 316
sequence length 330
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2003-05-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00626 Gelsolin Gelsolin repeat
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.20.10 Alpha Beta 3-Layer(aba) Sandwich Severin Severin 1p8xA01
3.40.20.10 Alpha Beta 3-Layer(aba) Sandwich Severin Severin 1p8xA03
3.40.20.10 Alpha Beta 3-Layer(aba) Sandwich Severin Severin 1p8xA02
5FAFA 5KYYB 1COFA 1SVYA 2LJ8A 2KVKA 1PCXA 1PD1A 1SVRA 5KYNA 4PKIG 3FFKA 1EQYS 1D0NA 2VACA 4CBWG 4KEDA 1V6FA 4LIZA 1T2LA 1C0GS 4PKGG 5FAEA 5KYXA 5DD2A 1WFSA 1KCQA 1ESVS 5KYXB 2FF3A 1NMDG 4PKHB 3Q2BA 5KYUB 1AK7A 2FH3A 2QTVA 2VILA 3A5MS 1X67A 2FF6G 2LXXA 1UDMA 4Z94G 1M2VA 1P8ZG 1J72A 3CJBG 3EFOA 5KYWA 1D4XG 1NLVG 1M2VB 3CIPG 4KEFA 3EFOB 3L50A 5KYWB 1H1VG 1P8XA 1HQZ1 5A1MA 1PD0A 1AHQA 1TMWA 4CBXG 2MOTA 1CNUA 2VIKA 1TVJA 2D8BA 2XFAA 1JHWA 1C0FS 5HVKD 3FG6A 1Q8XA 1Q8GA 3EGDA 5IVUA 4KEEA 1T3XA 4S10C 1SVQA 1NPHA 2NUPA 3EGDB 1YVNG 4JD2H 3EH1A 3FG7A 3EH2A 3CJCG 1QPVA 2W0IA 1DEJS 1VKKA 2FH4A 3A5NS 3DAWB 1WNJA 1WM4A 2NUTA 1YAGG 3A5OS 4CBUG 2MP4A 5HVKB 2LLFA 3TU5B 2I2QA 2NUTB 3EG9A 1VFQA 1M4JA 3EG9B 1MDUA 1NM1G 3CI5G 2FH1A 5L6WC 1AK6A 1M2OA 2FH2A 2HD7A 4BEX1 2NUPB 1F7SA 1RGIG 2MV2A 2XF1A 3FFNA 3EGXA 2FGHA 1CFYA 2L72A 3A5LS 1T44G 5KYUA 1T3YA 3EGXB 5KYYA
chains in the Genus database with same CATH superfamily
5FAFA 5KYYB 1COFA 1SVYA 2LJ8A 2KVKA 1PCXA 1PD1A 1SVRA 5KYNA 4PKIG 3FFKA 1EQYS 1D0NA 2VACA 4CBWG 4KEDA 1V6FA 4LIZA 1T2LA 1C0GS 4PKGG 5FAEA 5KYXA 3DA7A 5DD2A 1WFSA 1KCQA 1ESVS 5KYXB 2FF3A 1NMDG 4PKHB 3Q2BA 5KYUB 1AK7A 2FH3A 2QTVA 2VILA 3A5MS 1X67A 2FF6G 2LXXA 1UDMA 4Z94G 1M2VA 1P8ZG 1J72A 3CJBG 3EFOA 5KYWA 1D4XG 1NLVG 1M2VB 3CIPG 4KEFA 3EFOB 3L50A 5KYWB 1H1VG 1P8XA 1HQZ1 5A1MA 1PD0A 1AHQA 1TMWA 4CBXG 2MOTA 1CNUA 2VIKA 1TVJA 2D8BA 2XFAA 1JHWA 1C0FS 5HVKD 3FG6A 1Q8XA 1Q8GA 3EGDA 5IVUA 4KEEA 1T3XA 4S10C 1SVQA 1NPHA 2NUPA 3EGDB 1YVNG 4JD2H 3EH1A 3FG7A 3EH2A 3CJCG 1QPVA 2W0IA 1DEJS 1VKKA 2FH4A 3A5NS 3DAWB 1WNJA 1WM4A 2NUTA 1YAGG 3A5OS 4CBUG 2MP4A 5HVKB 2LLFA 3TU5B 2I2QA 2NUTB 3EG9A 1VFQA 1M4JA 3EG9B 1MDUA 1NM1G 3CI5G 2FH1A 5L6WC 1AK6A 1M2OA 2FH2A 2HD7A 4BEX1 2NUPB 1F7SA 1RGIG 2MV2A 2XF1A 3FFNA 3EGXA 2FGHA 1CFYA 2L72A 3A5LS 1T44G 5KYUA 1T3YA 3EGXB 5KYYA
chains in the Genus database with same CATH topology
5FAFA 5KYYB 1COFA 1SVYA 2LJ8A 2KVKA 1PCXA 1PD1A 1SVRA 5KYNA 4PKIG 3FFKA 1EQYS 1D0NA 2VACA 4CBWG 4KEDA 1V6FA 4LIZA 1T2LA 1C0GS 4PKGG 5FAEA 5KYXA 3DA7A 5DD2A 1WFSA 1KCQA 1ESVS 5KYXB 2FF3A 1NMDG 4PKHB 3Q2BA 5KYUB 1AK7A 2FH3A 2QTVA 2VILA 3A5MS 1X67A 2FF6G 2LXXA 1UDMA 4Z94G 1M2VA 1P8ZG 1J72A 3CJBG 3EFOA 5KYWA 1D4XG 1NLVG 1M2VB 3CIPG 4KEFA 3EFOB 3L50A 5KYWB 1H1VG 1P8XA 1HQZ1 5A1MA 1PD0A 1AHQA 1TMWA 4CBXG 2MOTA 1CNUA 2VIKA 1TVJA 2D8BA 2XFAA 1JHWA 1C0FS 5HVKD 3FG6A 1Q8XA 1Q8GA 3EGDA 5IVUA 4KEEA 1T3XA 4S10C 1SVQA 1NPHA 2NUPA 3EGDB 1YVNG 4JD2H 3EH1A 3FG7A 3EH2A 3CJCG 1QPVA 2W0IA 1DEJS 1VKKA 2FH4A 3A5NS 3DAWB 1WNJA 1WM4A 2NUTA 1YAGG 3A5OS 4CBUG 2MP4A 5HVKB 2LLFA 3TU5B 2I2QA 2NUTB 3EG9A 1VFQA 1M4JA 3EG9B 1MDUA 1NM1G 3CI5G 2FH1A 5L6WC 1AK6A 1M2OA 2FH2A 2HD7A 4BEX1 2NUPB 1F7SA 1RGIG 2MV2A 2XF1A 3FFNA 3EGXA 2FGHA 1CFYA 2L72A 3A5LS 1T44G 5KYUA 1T3YA 3EGXB 5KYYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5FAF A;  5KYY B;  1COF A;  1SVY A;  2LJ8 A;  2KVK A;  1PCX A;  1PD1 A;  1SVR A;  5KYN A;  4PKI G;  3FFK A;  1EQY S;  1D0N A;  2VAC A;  4CBW G;  4KED A;  1V6F A;  4LIZ A;  1T2L A;  1C0G S;  4PKG G;  5FAE A;  5KYX A;  5DD2 A;  1WFS A;  1KCQ A;  1ESV S;  5KYX B;  2FF3 A;  1NMD G;  4PKH B;  3Q2B A;  5KYU B;  1AK7 A;  2FH3 A;  2QTV A;  2VIL A;  3A5M S;  1X67 A;  2FF6 G;  2LXX A;  1UDM A;  4Z94 G;  1M2V A;  1P8Z G;  1J72 A;  3CJB G;  3EFO A;  5KYW A;  1D4X G;  1NLV G;  1M2V B;  3CIP G;  4KEF A;  3EFO B;  3L50 A;  5KYW B;  1H1V G;  1P8X A;  1HQZ 1;  5A1M A;  1PD0 A;  1AHQ A;  1TMW A;  4CBX G;  2MOT A;  1CNU A;  2VIK A;  1TVJ A;  2D8B A;  2XFA A;  1JHW A;  1C0F S;  5HVK D;  3FG6 A;  1Q8X A;  1Q8G A;  3EGD A;  5IVU A;  4KEE A;  1T3X A;  4S10 C;  1SVQ A;  1NPH A;  2NUP A;  3EGD B;  1YVN G;  4JD2 H;  3EH1 A;  3FG7 A;  3EH2 A;  3CJC G;  1QPV A;  2W0I A;  1DEJ S;  1VKK A;  2FH4 A;  3A5N S;  3DAW B;  1WNJ A;  1WM4 A;  2NUT A;  1YAG G;  3A5O S;  4CBU G;  2MP4 A;  5HVK B;  2LLF A;  3TU5 B;  2I2Q A;  2NUT B;  3EG9 A;  1VFQ A;  1M4J A;  3EG9 B;  1MDU A;  1NM1 G;  3CI5 G;  2FH1 A;  5L6W C;  1AK6 A;  1M2O A;  2FH2 A;  2HD7 A;  4BEX 1;  2NUP B;  1F7S A;  1RGI G;  2MV2 A;  2XF1 A;  3FFN A;  3EGX A;  2FGH A;  1CFY A;  2L72 A;  3A5L S;  1T44 G;  5KYU A;  1T3Y A;  3EGX B;  5KYY A; 
#chains in the Genus database with same CATH topology
 5FAF A;  5KYY B;  1COF A;  1SVY A;  2LJ8 A;  2KVK A;  1PCX A;  1PD1 A;  1SVR A;  5KYN A;  4PKI G;  3FFK A;  1EQY S;  1D0N A;  2VAC A;  4CBW G;  4KED A;  1V6F A;  4LIZ A;  1T2L A;  1C0G S;  4PKG G;  5FAE A;  5KYX A;  3DA7 A;  5DD2 A;  1WFS A;  1KCQ A;  1ESV S;  5KYX B;  2FF3 A;  1NMD G;  4PKH B;  3Q2B A;  5KYU B;  1AK7 A;  2FH3 A;  2QTV A;  2VIL A;  3A5M S;  1X67 A;  2FF6 G;  2LXX A;  1UDM A;  4Z94 G;  1M2V A;  1P8Z G;  1J72 A;  3CJB G;  3EFO A;  5KYW A;  1D4X G;  1NLV G;  1M2V B;  3CIP G;  4KEF A;  3EFO B;  3L50 A;  5KYW B;  1H1V G;  1P8X A;  1HQZ 1;  5A1M A;  1PD0 A;  1AHQ A;  1TMW A;  4CBX G;  2MOT A;  1CNU A;  2VIK A;  1TVJ A;  2D8B A;  2XFA A;  1JHW A;  1C0F S;  5HVK D;  3FG6 A;  1Q8X A;  1Q8G A;  3EGD A;  5IVU A;  4KEE A;  1T3X A;  4S10 C;  1SVQ A;  1NPH A;  2NUP A;  3EGD B;  1YVN G;  4JD2 H;  3EH1 A;  3FG7 A;  3EH2 A;  3CJC G;  1QPV A;  2W0I A;  1DEJ S;  1VKK A;  2FH4 A;  3A5N S;  3DAW B;  1WNJ A;  1WM4 A;  2NUT A;  1YAG G;  3A5O S;  4CBU G;  2MP4 A;  5HVK B;  2LLF A;  3TU5 B;  2I2Q A;  2NUT B;  3EG9 A;  1VFQ A;  1M4J A;  3EG9 B;  1MDU A;  1NM1 G;  3CI5 G;  2FH1 A;  5L6W C;  1AK6 A;  1M2O A;  2FH2 A;  2HD7 A;  4BEX 1;  2NUP B;  1F7S A;  1RGI G;  2MV2 A;  2XF1 A;  3FFN A;  3EGX A;  2FGH A;  1CFY A;  2L72 A;  3A5L S;  1T44 G;  5KYU A;  1T3Y A;  3EGX B;  5KYY A; 
#chains in the Genus database with same CATH homology
 5FAF A;  5KYY B;  1COF A;  1SVY A;  2LJ8 A;  2KVK A;  1PCX A;  1PD1 A;  1SVR A;  5KYN A;  4PKI G;  3FFK A;  1EQY S;  1D0N A;  2VAC A;  4CBW G;  4KED A;  1V6F A;  4LIZ A;  1T2L A;  1C0G S;  4PKG G;  5FAE A;  5KYX A;  3DA7 A;  5DD2 A;  1WFS A;  1KCQ A;  1ESV S;  5KYX B;  2FF3 A;  1NMD G;  4PKH B;  3Q2B A;  5KYU B;  1AK7 A;  2FH3 A;  2QTV A;  2VIL A;  3A5M S;  1X67 A;  2FF6 G;  2LXX A;  1UDM A;  4Z94 G;  1M2V A;  1P8Z G;  1J72 A;  3CJB G;  3EFO A;  5KYW A;  1D4X G;  1NLV G;  1M2V B;  3CIP G;  4KEF A;  3EFO B;  3L50 A;  5KYW B;  1H1V G;  1P8X A;  1HQZ 1;  5A1M A;  1PD0 A;  1AHQ A;  1TMW A;  4CBX G;  2MOT A;  1CNU A;  2VIK A;  1TVJ A;  2D8B A;  2XFA A;  1JHW A;  1C0F S;  5HVK D;  3FG6 A;  1Q8X A;  1Q8G A;  3EGD A;  5IVU A;  4KEE A;  1T3X A;  4S10 C;  1SVQ A;  1NPH A;  2NUP A;  3EGD B;  1YVN G;  4JD2 H;  3EH1 A;  3FG7 A;  3EH2 A;  3CJC G;  1QPV A;  2W0I A;  1DEJ S;  1VKK A;  2FH4 A;  3A5N S;  3DAW B;  1WNJ A;  1WM4 A;  2NUT A;  1YAG G;  3A5O S;  4CBU G;  2MP4 A;  5HVK B;  2LLF A;  3TU5 B;  2I2Q A;  2NUT B;  3EG9 A;  1VFQ A;  1M4J A;  3EG9 B;  1MDU A;  1NM1 G;  3CI5 G;  2FH1 A;  5L6W C;  1AK6 A;  1M2O A;  2FH2 A;  2HD7 A;  4BEX 1;  2NUP B;  1F7S A;  1RGI G;  2MV2 A;  2XF1 A;  3FFN A;  3EGX A;  2FGH A;  1CFY A;  2L72 A;  3A5L S;  1T44 G;  5KYU A;  1T3Y A;  3EGX B;  5KYY A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...