1PK0A

Crystal structure of the ef3-cam complexed with pmeapp
Total Genus 152
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
152
sequence length
507
structure length
484
Chain Sequence
RIDVLKGEKALKASGLVPEHADAFKKIARELNTYILFRPVNKLATNLIKSGVATKGLNVHGKSSDWGPVAGYIPFDQDLSKKHGQQLAVEKGNLENKKSITEHEGEIGKIPLKLDHLRIEELKENGIILKGKKEIDNGKKYYLLESNNQVYEFRISDENNEVQYKTKEGKITVLGEKFNWRNIEVMAKNVEGVLKPLTADYDLFALAPSLTEIKKQIPQKEWDKVVNTPNSLEKQKGVTNLLIKYGIERKPDSTKGTLSNWQKQMLDRLNEAVKYTGYTGGDVVNHGTEQDNEEFPEKDNEIFIINPEGEFILTKNWEMTGRFIEKNITGKDYLYYFNRSYNKIAPGNKAYIEWTDPITKAKINTIPTSAEFIKNLSSIRRSSVKKIAGYLSDYYNSANHIFSQEKKRKISIFRGIQAYNEIENVLKSKQIAPEYKNYFQYLKERITNQVQLLLTHQKFKLLYKQLNFTENETDNFEVFQKIID
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Lyase/metal binding protein
molecule keywords Calmodulin-sensitive adenylate cyclase
publication title Selective inhibition of anthrax edema factor by adefovir, a drug for chronic hepatitis B virus infection.
pubmed doi rcsb
source organism Bacillus anthracis
total genus 152
structure length 484
sequence length 507
chains with identical sequence B, C
ec nomenclature ec 4.6.1.1: Adenylate cyclase.
pdb deposition date 2003-06-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03497 Anthrax_toxA Anthrax toxin LF subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.140.60 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A; domain 3 1pk0A03
3.90.1760.10 Alpha Beta Alpha-Beta Complex Adenylylcyclase toxin fold Anthrax toxin, edema factor, central domain 1pk0A02
1LVCA 1PK0A 1XFUA 1XFVA 1K90A 1YRTA 2COLA 1S26A 1XFWA 1XFZA 1K93A 1ZOTA 1SK6A 1XFYA 1Y0VA 1YRUA 1XFXA 1K8TA
chains in the Genus database with same CATH superfamily
2BU6A 3GNCA 2ZKJA 2BU2A 3SXQA 1RP3A 2E81A 4HKSA 4G97A 4FF4A 1S26A 1FS7A 1X91A 4KTOA 4KSAA 4NXLA 4G5EA 2CJ6A 2R05A 4L3YA 3II9A 2YYLA 4J1VA 2JBRA 3MPJA 4DOYA 4FF1A 5K3HA 1K90A 2YYGA 3TZ0A 4Q1OA 3VKHA 3D1IA 4L3ZA 1GKXA 2IX5A 4DZYA 5J71A 2YYKA 1GJVA 1XFXA 2CJ7A 3UU9A 3C46A 1X8ZA 1JM6A 2C12A 1PK0A 2CX9A 3MDDA 3C2PA 2ZDXA 3L1TA 5M4NA 4FF3A 2COLA 2YYJA 4O5MA 1W07A 4H81A 4Q0TA 4E02A 1R2JA 2VIGA 4H7QA 2YYIA 3AFFA 4L38A 3OIBA 1R3BA 2REHA 4JEKA 3LGQA 3D9GA 1BUCA 1OAHA 3D6BA 4AKGA 2CJ8A 4E00A 1RJ1A 1IVHA 1UKWA 1Y0VA 3BNHA 3TZ5A 2EBAA 3HWCA 2FONA 2Q8IA 1UDYA 2OEXA 3MMOA 2IX6A 1Y8OA 2JIFA 4N5FA 4HKRA 4Q4UA 3TZ2A 4E01A 3VADA 4V26A 3FCJA 2UXWA 3GQTA 3EONA 2HJNA 4P79A 1RX0A 4HR3A 1XFWA 3N0RA 3CE2A 3PFDA 2C0UA 2JBTA 2LFWA 3BNJA 3CRKA 3X0YA 3SWOA 3B96A 5M4KA 1Y8PA 4MP2A 5BRMA 4KCFA 4QICA 3TTBA 2R0NA 3OWAA 2RFQA 3FO3A 4L3XA 2XS1A 3P4TA 4P13A 4AI6A 4MPCA 2RDZA 2D29A 1SC5A 3MXLA 3D9DA 2EBHX 3MKHA 2DVLA 1RJ4A 1XFYA 2VR0A 3C3LA 1FS9A 5K3GA 3S7WA 2ZDYA 3M9VA 4AKIA 2XQRB 2FP1A 3D9FA 2WBIA 3MPIA 2RF7A 3OWMA 4KS9A 2AZEA 2R03A 3NF4A 5M4MA 2FP2A 3BNFA 3TZ4A 3Q24A 4KSFA 4MPEA 4WJYA 2OEVA 4L1FA 2F6LA 3Q23A 5GJVE 4ZXVA 5GJWE 4AKHA 2PO4A 2EC5A 3D2RA 2EBFX 3RKHA 2Z1QA 3MDEA 2A1TA 1EGDA 1IS2A 5J6AA 2E0AA 4MPNA 1U8VA 2BU7A 2JBSA 4ZYJA 4FZ4A 2J7AA 2DDHA 3Q22A 3F29A 4Q17A 2AO2A 3VKGA 5B5VA 4JIZA 3Q0AA 1SIQA 2Q8HA 2BU5A 3X29A 4LQSB 1FS8A 4M9AA 2PNRA 4IV6A 4OO2A 1ZOTA 2CJ4A 5B5WA 3X0XA 4U83A 5K3JA 2QR4A 4XVXA 1GKZA 3BNGA 3GM6A 4MP7A 4X28C 2VF1A 2YYMA 2OR0A 3EOMA 2Q8FA 2Q8GA 3LG1A 4IRNA 3KMLA 4X28A 4W9UA 1EGEA 2BTZA 4JIOA 2OJQA 1XFVA 2YGWA 2ZAFA 4H85A 2PG0A 2OT4A 3TORA 2R02A 4FF2A 5B6BA 3AFEA 1JQIA 1PI1A 1XG2B 3CRLA 2ZO5A 5K3IA 5M4PA 4LQQB 1LVCA 1T9GA 1YRTA 1SIRA 1WS9A 1K93A 1XFZA 1Y8NA 1QDBA 1SK6A 2CJ5A 2R0MA 2E80A 4RM7A 3SF6A 1K8TA 1X90A 2XS8A 4V25A 3R7KA 1YRUA 4Q5CA 3SCEA 2GBBA 5BRKA 3D9EA 3UBRA 2BU8A 1GU6A 4F0XA 1XFUA 4Q5BA 1EGCA
chains in the Genus database with same CATH topology
2QR4A 1RP3A 4HKSA 4G97A 4FF4A 1S26A 4AKIA 2FP1A 2VF1A 4HKRA 4KSAA 4KS9A 2AZEA 3KMLA 2FP2A 4P79A 4FF1A 2YGWA 1XFVA 1K90A 4FF2A 3Q24A 4KSFA 4QICA 1XFWA 3N0RA 3CE2A 2F6LA 2LFWA 3Q23A 4FF3A 5GJVE 5GJWE 4AKHA 1XFXA 2EC5A 2PO4A 2EBFX 3C46A 3C2PA 1LVCA 1PK0A 2COLA 1YRTA 1XFZA 1K93A 4FZ4A 4AI6A 1SK6A 3Q22A 1YRUA 1K8TA 3VKHA 2AO2A 3VKGA 3Q0AA 2GBBA 1SC5A 3X29A 4AKGA 2EBHX 1ZOTA 1XFYA 4F0XA 1XFUA 1Y0VA 3C3LA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1LVC A;  1PK0 A;  1XFU A;  1XFV A;  1K90 A;  1YRT A;  2COL A;  1S26 A;  1XFW A;  1XFZ A;  1K93 A;  1ZOT A;  1SK6 A;  1XFY A;  1Y0V A;  1YRU A;  1XFX A;  1K8T A; 
#chains in the Genus database with same CATH topology
 2BU6 A;  3GNC A;  2ZKJ A;  2BU2 A;  3SXQ A;  1RP3 A;  2E81 A;  4HKS A;  4G97 A;  4FF4 A;  1S26 A;  1FS7 A;  1X91 A;  4KTO A;  4KSA A;  4NXL A;  4G5E A;  2CJ6 A;  2R05 A;  4L3Y A;  3II9 A;  2YYL A;  4J1V A;  2JBR A;  3MPJ A;  4DOY A;  4FF1 A;  5K3H A;  1K90 A;  2YYG A;  3TZ0 A;  4Q1O A;  3VKH A;  3D1I A;  4L3Z A;  1GKX A;  2IX5 A;  4DZY A;  5J71 A;  2YYK A;  1GJV A;  1XFX A;  2CJ7 A;  3UU9 A;  3C46 A;  1X8Z A;  1JM6 A;  2C12 A;  1PK0 A;  2CX9 A;  3MDD A;  3C2P A;  2ZDX A;  3L1T A;  5M4N A;  4FF3 A;  2COL A;  2YYJ A;  4O5M A;  1W07 A;  4H81 A;  4Q0T A;  4E02 A;  1R2J A;  2VIG A;  4H7Q A;  2YYI A;  3AFF A;  4L38 A;  3OIB A;  1R3B A;  2REH A;  4JEK A;  3LGQ A;  3D9G A;  1BUC A;  1OAH A;  3D6B A;  4AKG A;  2CJ8 A;  4E00 A;  1RJ1 A;  1IVH A;  1UKW A;  1Y0V A;  3BNH A;  3TZ5 A;  2EBA A;  3HWC A;  2FON A;  2Q8I A;  1UDY A;  2OEX A;  3MMO A;  2IX6 A;  1Y8O A;  2JIF A;  4N5F A;  4HKR A;  4Q4U A;  3TZ2 A;  4E01 A;  3VAD A;  4V26 A;  3FCJ A;  2UXW A;  3GQT A;  3EON A;  2HJN A;  4P79 A;  1RX0 A;  4HR3 A;  1XFW A;  3N0R A;  3CE2 A;  3PFD A;  2C0U A;  2JBT A;  2LFW A;  3BNJ A;  3CRK A;  3X0Y A;  3SWO A;  3B96 A;  5M4K A;  1Y8P A;  4MP2 A;  5BRM A;  4KCF A;  4QIC A;  3TTB A;  2R0N A;  3OWA A;  2RFQ A;  3FO3 A;  4L3X A;  2XS1 A;  3P4T A;  4P13 A;  4AI6 A;  4MPC A;  2RDZ A;  2D29 A;  1SC5 A;  3MXL A;  3D9D A;  2EBH X;  3MKH A;  2DVL A;  1RJ4 A;  1XFY A;  2VR0 A;  3C3L A;  1FS9 A;  5K3G A;  3S7W A;  2ZDY A;  3M9V A;  4AKI A;  2XQR B;  2FP1 A;  3D9F A;  2WBI A;  3MPI A;  2RF7 A;  3OWM A;  4KS9 A;  2AZE A;  2R03 A;  3NF4 A;  5M4M A;  2FP2 A;  3BNF A;  3TZ4 A;  3Q24 A;  4KSF A;  4MPE A;  4WJY A;  2OEV A;  4L1F A;  2F6L A;  3Q23 A;  5GJV E;  4ZXV A;  5GJW E;  4AKH A;  2PO4 A;  2EC5 A;  3D2R A;  2EBF X;  3RKH A;  2Z1Q A;  3MDE A;  2A1T A;  1EGD A;  1IS2 A;  5J6A A;  2E0A A;  4MPN A;  1U8V A;  2BU7 A;  2JBS A;  4ZYJ A;  4FZ4 A;  2J7A A;  2DDH A;  3Q22 A;  3F29 A;  4Q17 A;  2AO2 A;  3VKG A;  5B5V A;  4JIZ A;  3Q0A A;  1SIQ A;  2Q8H A;  2BU5 A;  3X29 A;  4LQS B;  1FS8 A;  4M9A A;  2PNR A;  4IV6 A;  4OO2 A;  1ZOT A;  2CJ4 A;  5B5W A;  3X0X A;  4U83 A;  5K3J A;  2QR4 A;  4XVX A;  1GKZ A;  3BNG A;  3GM6 A;  4MP7 A;  4X28 C;  2VF1 A;  2YYM A;  2OR0 A;  3EOM A;  2Q8F A;  2Q8G A;  3LG1 A;  4IRN A;  3KML A;  4X28 A;  4W9U A;  1EGE A;  2BTZ A;  4JIO A;  2OJQ A;  1XFV A;  2YGW A;  2ZAF A;  4H85 A;  2PG0 A;  2OT4 A;  3TOR A;  2R02 A;  4FF2 A;  5B6B A;  3AFE A;  1JQI A;  1PI1 A;  1XG2 B;  3CRL A;  2ZO5 A;  5K3I A;  5M4P A;  4LQQ B;  1LVC A;  1T9G A;  1YRT A;  1SIR A;  1WS9 A;  1K93 A;  1XFZ A;  1Y8N A;  1QDB A;  1SK6 A;  2CJ5 A;  2R0M A;  2E80 A;  4RM7 A;  3SF6 A;  1K8T A;  1X90 A;  2XS8 A;  4V25 A;  3R7K A;  1YRU A;  4Q5C A;  3SCE A;  2GBB A;  5BRK A;  3D9E A;  3UBR A;  2BU8 A;  1GU6 A;  4F0X A;  1XFU A;  4Q5B A;  1EGC A; 
#chains in the Genus database with same CATH homology
 2QR4 A;  1RP3 A;  4HKS A;  4G97 A;  4FF4 A;  1S26 A;  4AKI A;  2FP1 A;  2VF1 A;  4HKR A;  4KSA A;  4KS9 A;  2AZE A;  3KML A;  2FP2 A;  4P79 A;  4FF1 A;  2YGW A;  1XFV A;  1K90 A;  4FF2 A;  3Q24 A;  4KSF A;  4QIC A;  1XFW A;  3N0R A;  3CE2 A;  2F6L A;  2LFW A;  3Q23 A;  4FF3 A;  5GJV E;  5GJW E;  4AKH A;  1XFX A;  2EC5 A;  2PO4 A;  2EBF X;  3C46 A;  3C2P A;  1LVC A;  1PK0 A;  2COL A;  1YRT A;  1XFZ A;  1K93 A;  4FZ4 A;  4AI6 A;  1SK6 A;  3Q22 A;  1YRU A;  1K8T A;  3VKH A;  2AO2 A;  3VKG A;  3Q0A A;  2GBB A;  1SC5 A;  3X29 A;  4AKG A;  2EBH X;  1ZOT A;  1XFY A;  4F0X A;  1XFU A;  1Y0V A;  3C3L A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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