The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
10
|
sequence length |
122
|
structure length |
122
|
Chain Sequence |
VTDNAGAVKFPQLCKFCDVRFSTCDNQKSCMSNCSITSICEKPQEVCVAVWRKNDENITLETVCHDPKLPYHDFILEDAASPKCIMKEKKKPGETFFMCSCSSDECNDNIIFSEEYNTSNPD
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| molecule tags |
Cytokine receptor
|
| source organism |
Homo sapiens
|
| publication title |
Solution structure and backbone dynamics of the TGF-beta type II receptor extracellular domain
pubmed doi rcsb |
| molecule keywords |
TGF-beta receptor type II
|
| total genus |
10
|
| structure length |
122
|
| sequence length |
122
|
| ec nomenclature |
ec
2.7.11.30: Receptor protein serine/threonine kinase. |
| pdb deposition date | 2003-06-08 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF08917 | ecTbetaR2 | Transforming growth factor beta receptor 2 ectodomain |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Mainly Beta | Ribbon | CD59 | CD59 |
#chains in the Genus database with same CATH superfamily 1KBA A; 1KBS A; 4IYE A; 1ERA A; 1KFH A; 1MAH F; 1FAS A; 2ERA A; 3LAQ U; 1ES7 B; 1H0J A; 1RL5 A; 1QKD A; 1LXG A; 4LFT A; 2NBT A; 4QTI U; 1M9Z A; 2H7Z A; 2L03 A; 1LSI A; 2UWR A; 2MJY A; 2H62 C; 1NTN A; 2N99 A; 4RUD A; 1HC9 A; 2MJ4 A; 5DO6 A; 2MUP A; 1IQ9 A; 2CRS A; 4EY8 B; 2BTX A; 1CRE A; 1ONJ A; 2HLR A; 1FF4 A; 1L4W A; 1F94 A; 4BDT B; 1COD A; 1CXN A; 1NTX A; 1KL8 A; 2H5F A; 3HH7 A; 2VLW A; 1IK8 A; 1ERG A; 4P7U A; 2H64 B; 1IKC A; 2MHY A; 3ERA A; 3U74 U; 1TXA A; 1MR6 A; 2CTX A; 4FAO E; 6EBX A; 1JE9 A; 3U73 U; 2L5S A; 1QM7 A; 1FSC A; 3FEV A; 2GOO B; 1PLO A; 1JBD A; 1CHV S; 3BT1 U; 1HOY A; 1JGK A; 2BHI A; 2PJY B; 5IMY C; 4FAO C; 1FRA A; 1NYU A; 1UG4 A; 1VB0 A; 1CDQ A; 1B41 B; 1REW C; 3KFD E; 1CDS A; 1HAJ A; 1NEA A; 1KXI A; 4HQP F; 1CCQ A; 1KTZ B; 1YWH A; 5IMT D; 1KBT A; 2I9B E; 1IDI A; 4AEA A; 2H62 D; 1XT3 A; 3NH7 A; 1CRF A; 1FFJ A; 1TFS A; 2QJB C; 1ABT A; 2ABX A; 2FD6 U; 1FSS B; 1CB9 A; 2CCX A; 2UX2 A; 4UY2 C; 3NDS A; 1KC4 A; 1KS6 A; 1LX5 B; 2H64 C; 3QB4 B; 1W6B A; 2J8B A; 2CDX A; 1BXP A; 1V6P A; 2QC1 A; 5DU1 A; 1S4Y A; 1I02 A; 1RGJ A; 1CDT A; 1IJC A; 1CVO A; 2QJA C; 1HC9 B; 1NXB A; 4ZQY A; 1LJZ A; 2GOO C; 1CDR A; 3EVS C; 2H8U A; 2PJY C; 4BIK B; 3KFD I; 1DRS A; 2QJ9 C; 1G6M A; 1IDG A; 5EBX A; 3NEQ A; 1KU6 B; 1BTE A; 1QKE A; 4XJJ A; 1CTX A; 1COE A; 4OM5 A; 1F8U B; 1NOR A; 2HLQ A; 2LCR A; 2JQP A; 3PLC A; 2JVE A; 1CXO A; 1TGX A; 2MUO A; 2X8B B; 5DZ5 A; 3BT2 U; 4OM4 A; 4DO8 A; 2CRT A; 2OFS A; 1IDH A; 1LXH A; 1IDL A; 1NYS A; 1ZAD A; 2MFA A; 2H7Z B; 2MJ0 A; 1HAA A; 3EBX A; 1TXB A; 3VTS A; 2LA1 A; 2K3G A; #chains in the Genus database with same CATH topology 1KBA A; 1KBS A; 4IYE A; 1ERA A; 1KFH A; 1MAH F; 1FAS A; 2ERA A; 3LAQ U; 1ES7 B; 1H0J A; 1RL5 A; 1QKD A; 1LXG A; 4LFT A; 2NBT A; 4QTI U; 1M9Z A; 2H7Z A; 2L03 A; 1LSI A; 2UWR A; 2MJY A; 2H62 C; 1NTN A; 2N99 A; 4RUD A; 1HC9 A; 2MJ4 A; 5DO6 A; 2MUP A; 1IQ9 A; 2CRS A; 4EY8 B; 2BTX A; 1CRE A; 1ONJ A; 2HLR A; 1FF4 A; 1L4W A; 1F94 A; 4BDT B; 1COD A; 1CXN A; 1NTX A; 1KL8 A; 2H5F A; 3HH7 A; 2VLW A; 1IK8 A; 1ERG A; 4P7U A; 2H64 B; 1IKC A; 2MHY A; 3ERA A; 3U74 U; 1TXA A; 1MR6 A; 2CTX A; 4FAO E; 6EBX A; 1JE9 A; 3U73 U; 4KSN A; 2L5S A; 1QM7 A; 1FSC A; 3FEV A; 2GOO B; 1PLO A; 1JBD A; 1CHV S; 3BT1 U; 1HOY A; 1JGK A; 2BHI A; 2PJY B; 5IMY C; 4FAO C; 1FRA A; 1NYU A; 1UG4 A; 1VB0 A; 1CDQ A; 1B41 B; 1REW C; 3KFD E; 1CDS A; 1HAJ A; 1NEA A; 1KXI A; 4HQP F; 1CCQ A; 1KTZ B; 1YWH A; 5IMT D; 1KBT A; 2I9B E; 1IDI A; 4AEA A; 2H62 D; 1XT3 A; 3NH7 A; 1CRF A; 1FFJ A; 1TFS A; 2QJB C; 1ABT A; 2ABX A; 2FD6 U; 1FSS B; 1CB9 A; 2CCX A; 2UX2 A; 4UY2 C; 3NDS A; 1KC4 A; 1KS6 A; 1LX5 B; 2H64 C; 3QB4 B; 1W6B A; 2J8B A; 2CDX A; 1BXP A; 1V6P A; 2QC1 A; 5DU1 A; 1S4Y A; 1I02 A; 1RGJ A; 1CDT A; 1IJC A; 1CVO A; 2QJA C; 1HC9 B; 1NXB A; 4ZQY A; 1LJZ A; 2GOO C; 1CDR A; 3EVS C; 2H8U A; 2PJY C; 4BIK B; 3KFD I; 1DRS A; 2QJ9 C; 1G6M A; 1IDG A; 5EBX A; 3NEQ A; 1KU6 B; 1BTE A; 1QKE A; 4XJJ A; 1CTX A; 1COE A; 4OM5 A; 1F8U B; 1NOR A; 2HLQ A; 2LCR A; 2JQP A; 3PLC A; 2JVE A; 1CXO A; 1TGX A; 2MUO A; 2X8B B; 5DZ5 A; 3BT2 U; 4OM4 A; 4DO8 A; 2CRT A; 2OFS A; 1IDH A; 1LXH A; 1IDL A; 1NYS A; 1ZAD A; 2MFA A; 2H7Z B; 2MJ0 A; 1HAA A; 3EBX A; 1TXB A; 3VTS A; 2LA1 A; 2K3G A; #chains in the Genus database with same CATH homology 1KBA A; 1KBS A; 4IYE A; 1ERA A; 1KFH A; 1MAH F; 1FAS A; 2ERA A; 3LAQ U; 1ES7 B; 1H0J A; 1RL5 A; 1QKD A; 1LXG A; 4LFT A; 2NBT A; 4QTI U; 1M9Z A; 2H7Z A; 2L03 A; 1LSI A; 2UWR A; 2MJY A; 2H62 C; 1NTN A; 2N99 A; 4RUD A; 1HC9 A; 2MJ4 A; 5DO6 A; 2MUP A; 1IQ9 A; 2CRS A; 4EY8 B; 2BTX A; 1CRE A; 1ONJ A; 2HLR A; 1FF4 A; 1L4W A; 1F94 A; 4BDT B; 1COD A; 1CXN A; 1NTX A; 1KL8 A; 2H5F A; 3HH7 A; 2VLW A; 1IK8 A; 1ERG A; 4P7U A; 2H64 B; 1IKC A; 2MHY A; 3ERA A; 3U74 U; 1TXA A; 1MR6 A; 2CTX A; 4FAO E; 6EBX A; 1JE9 A; 3U73 U; 4KSN A; 2L5S A; 1QM7 A; 1FSC A; 3FEV A; 2GOO B; 1PLO A; 1JBD A; 1CHV S; 3BT1 U; 1HOY A; 1JGK A; 2BHI A; 2PJY B; 5IMY C; 4FAO C; 1FRA A; 1NYU A; 1UG4 A; 1VB0 A; 1CDQ A; 1B41 B; 1REW C; 3KFD E; 1CDS A; 1HAJ A; 1NEA A; 1KXI A; 4HQP F; 1CCQ A; 1KTZ B; 1YWH A; 5IMT D; 1KBT A; 2I9B E; 1IDI A; 4AEA A; 2H62 D; 1XT3 A; 3NH7 A; 1CRF A; 1FFJ A; 1TFS A; 2QJB C; 1ABT A; 2ABX A; 2FD6 U; 1FSS B; 1CB9 A; 2CCX A; 2UX2 A; 4UY2 C; 3NDS A; 1KC4 A; 1KS6 A; 1LX5 B; 2H64 C; 3QB4 B; 1W6B A; 2J8B A; 2CDX A; 1BXP A; 1V6P A; 2QC1 A; 5DU1 A; 1S4Y A; 1I02 A; 1RGJ A; 1CDT A; 1IJC A; 1CVO A; 2QJA C; 1HC9 B; 1NXB A; 4ZQY A; 1LJZ A; 2GOO C; 1CDR A; 3EVS C; 2H8U A; 2PJY C; 4BIK B; 3KFD I; 1DRS A; 2QJ9 C; 1G6M A; 1IDG A; 5EBX A; 3NEQ A; 1KU6 B; 1BTE A; 1QKE A; 4XJJ A; 1CTX A; 1COE A; 4OM5 A; 1F8U B; 1NOR A; 2HLQ A; 2LCR A; 2JQP A; 3PLC A; 2JVE A; 1CXO A; 1TGX A; 2MUO A; 2X8B B; 5DZ5 A; 3BT2 U; 4OM4 A; 4DO8 A; 2CRT A; 2OFS A; 1IDH A; 1LXH A; 1IDL A; 1NYS A; 1ZAD A; 2MFA A; 2H7Z B; 2MJ0 A; 1HAA A; 3EBX A; 1TXB A; 3VTS A; 2LA1 A; 2K3G A;
#similar chains in the Genus database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
