1Q3IA

Crystal structure of na,k-atpase n-domain
Total Genus 53
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
53
sequence length
214
structure length
192
Chain Sequence
b'MMTVAHMWFDNQIHEADTTTFDKRSPTWTALSRIAGLCNRAVFKRDTAGDASESALLKCIELSCGSVRKMRDRNPKVAEISYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHHH'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Na,K-ATPase
publication title The Crystallographic Structure of Na,K-ATPase N-domain at 2.6 A Resolution
pubmed doi rcsb
source organism Sus scrofa
molecule tags Hydrolase
total genus 53
structure length 192
sequence length 214
ec nomenclature ec 7.2.2.13: Na(+)/K(+)-exchanging ATPase.
pdb deposition date 2003-07-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF13246 Cation_ATPase Cation transport ATPase (P-type)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1110.10 Alpha Beta 3-Layer(aba) Sandwich Calcium-transporting ATPase, cytoplasmic domain N Calcium-transporting ATPase, cytoplasmic domain N 1q3iA00
1U7QA 5AW4A 1WPGA 2C88A 3A3YA 2KMXA 3B8EA 3AR9A 3A1EA 4YCMA 2A00A 5AW5A 5A3RA 5AVWA 3AR6A 4KYTA 2YFYA 2ZBFA 5AVYA 4XE5A 2IYEA 3FPSA 5AW8A 3J7TA 3WGVA 2KMVA 3NALA 3B9RA 2YJ4A 1MO7A 5AVXA 1VFPA 3AR4A 2YJ3A 3B9BA 3W5DA 5AW7A 3GWIA 2OA0A 1IWOA 1MO8A 3AR5A 5AVTA 4UMVA 3NANA 4BBJA 5AW0A 2AGVA 2ZXEA 3AR8A 3BA6A 5AVRA 5AVZA 5AVSA 1T5SA 5AW2A 4BEVA 3W5BA 5AVQA 2ZBGA 4NABA 1XP5A 2DQSA 4Y3UA 5AVUA 3SKYA 2BY4A 2ZBDA 4J2TA 2B8EA 5AW3A 2EARA 3AR7A 3AR2A 4HYTA 4H1WA 4YCLA 5AVVA 3TLMA 3FGOA 1Q3IA 3FPBA 3KDPA 3N5KA 4UU0A 5AW6A 2EAUA 3RFUA 2YJ6A 4BEWA 5A3SA 3SKXA 1SVJA 3AR3A 3WGUA 1SU4A 1T5TA 3W5CA 4YCNA 4RETA 4XOUA 5AW1A 2A29A 2EATA 2C9MA 3NAMA 4RESA 4UU1A 2YJ5A 3N8GA 3A1CA 2C8LA 5AW9A 3A1DA 4BYGA 2ZBEA 2ARFA 5A3QA 2C8KA 2O9JA 3W5AA
chains in the Genus database with same CATH superfamily
1U7QA 5AW4A 1WPGA 2C88A 3A3YA 2KMXA 3B8EA 3AR9A 3A1EA 4YCMA 2A00A 5AW5A 5A3RA 5AVWA 3AR6A 4KYTA 2YFYA 2ZBFA 5AVYA 4XE5A 2IYEA 3FPSA 5AW8A 3J7TA 3WGVA 2KMVA 3NALA 3B9RA 2YJ4A 1MO7A 5AVXA 1VFPA 3AR4A 2YJ3A 3B9BA 3W5DA 5AW7A 3GWIA 2OA0A 1IWOA 1MO8A 3AR5A 5AVTA 4UMVA 3NANA 4BBJA 5AW0A 2AGVA 2ZXEA 3AR8A 3BA6A 5AVRA 5AVZA 5AVSA 1T5SA 5AW2A 4BEVA 3W5BA 5AVQA 2ZBGA 4NABA 1XP5A 2DQSA 4Y3UA 5AVUA 3SKYA 2BY4A 2ZBDA 4J2TA 2B8EA 5AW3A 2EARA 3AR7A 3AR2A 4HYTA 4H1WA 4YCLA 5AVVA 3TLMA 3FGOA 1Q3IA 3FPBA 3KDPA 3N5KA 4UU0A 5AW6A 2EAUA 3RFUA 2YJ6A 4BEWA 5A3SA 3SKXA 1SVJA 3AR3A 3WGUA 1SU4A 1T5TA 3W5CA 4YCNA 4RETA 4XOUA 5AW1A 2A29A 2EATA 2C9MA 3NAMA 4RESA 4UU1A 2YJ5A 3N8GA 3A1CA 2C8LA 5AW9A 3A1DA 4BYGA 2ZBEA 2ARFA 5A3QA 2C8KA 2O9JA 3W5AA
chains in the Genus database with same CATH topology
1U7QA 5AW4A 1WPGA 2C88A 3A3YA 2KMXA 3B8EA 3AR9A 3A1EA 4YCMA 2A00A 5AW5A 5A3RA 5AVWA 3AR6A 4KYTA 2YFYA 2ZBFA 5AVYA 4XE5A 2IYEA 3FPSA 5AW8A 3J7TA 3WGVA 2KMVA 3NALA 3B9RA 2YJ4A 1MO7A 5AVXA 1VFPA 3AR4A 2YJ3A 3B9BA 3W5DA 5AW7A 3GWIA 2OA0A 1IWOA 1MO8A 3AR5A 5AVTA 4UMVA 3NANA 4BBJA 5AW0A 2AGVA 2ZXEA 3AR8A 3BA6A 5AVRA 5AVZA 5AVSA 1T5SA 5AW2A 4BEVA 3W5BA 5AVQA 2ZBGA 4NABA 1XP5A 2DQSA 4Y3UA 5AVUA 3SKYA 2BY4A 2ZBDA 4J2TA 2B8EA 5AW3A 2EARA 3AR7A 3AR2A 4HYTA 4H1WA 4YCLA 5AVVA 3TLMA 3FGOA 1Q3IA 3FPBA 3KDPA 3N5KA 4UU0A 5AW6A 2EAUA 3RFUA 2YJ6A 4BEWA 5A3SA 3SKXA 1SVJA 3AR3A 3WGUA 1SU4A 1T5TA 3W5CA 4YCNA 4RETA 4XOUA 5AW1A 2A29A 2EATA 2C9MA 3NAMA 4RESA 4UU1A 2YJ5A 3N8GA 3A1CA 2C8LA 5AW9A 3A1DA 4BYGA 2ZBEA 2ARFA 5A3QA 2C8KA 2O9JA 3W5AA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1U7Q A;  5AW4 A;  1WPG A;  2C88 A;  3A3Y A;  2KMX A;  3B8E A;  3AR9 A;  3A1E A;  4YCM A;  2A00 A;  5AW5 A;  5A3R A;  5AVW A;  3AR6 A;  4KYT A;  2YFY A;  2ZBF A;  5AVY A;  4XE5 A;  2IYE A;  3FPS A;  5AW8 A;  3J7T A;  3WGV A;  2KMV A;  3NAL A;  3B9R A;  2YJ4 A;  1MO7 A;  5AVX A;  1VFP A;  3AR4 A;  2YJ3 A;  3B9B A;  3W5D A;  5AW7 A;  3GWI A;  2OA0 A;  1IWO A;  1MO8 A;  3AR5 A;  5AVT A;  4UMV A;  3NAN A;  4BBJ A;  5AW0 A;  2AGV A;  2ZXE A;  3AR8 A;  3BA6 A;  5AVR A;  5AVZ A;  5AVS A;  1T5S A;  5AW2 A;  4BEV A;  3W5B A;  5AVQ A;  2ZBG A;  4NAB A;  1XP5 A;  2DQS A;  4Y3U A;  5AVU A;  3SKY A;  2BY4 A;  2ZBD A;  4J2T A;  2B8E A;  5AW3 A;  2EAR A;  3AR7 A;  3AR2 A;  4HYT A;  4H1W A;  4YCL A;  5AVV A;  3TLM A;  3FGO A;  1Q3I A;  3FPB A;  3KDP A;  3N5K A;  4UU0 A;  5AW6 A;  2EAU A;  3RFU A;  2YJ6 A;  4BEW A;  5A3S A;  3SKX A;  1SVJ A;  3AR3 A;  3WGU A;  1SU4 A;  1T5T A;  3W5C A;  4YCN A;  4RET A;  4XOU A;  5AW1 A;  2A29 A;  2EAT A;  2C9M A;  3NAM A;  4RES A;  4UU1 A;  2YJ5 A;  3N8G A;  3A1C A;  2C8L A;  5AW9 A;  3A1D A;  4BYG A;  2ZBE A;  2ARF A;  5A3Q A;  2C8K A;  2O9J A;  3W5A A; 
#chains in the Genus database with same CATH topology
 1U7Q A;  5AW4 A;  1WPG A;  2C88 A;  3A3Y A;  2KMX A;  3B8E A;  3AR9 A;  3A1E A;  4YCM A;  2A00 A;  5AW5 A;  5A3R A;  5AVW A;  3AR6 A;  4KYT A;  2YFY A;  2ZBF A;  5AVY A;  4XE5 A;  2IYE A;  3FPS A;  5AW8 A;  3J7T A;  3WGV A;  2KMV A;  3NAL A;  3B9R A;  2YJ4 A;  1MO7 A;  5AVX A;  1VFP A;  3AR4 A;  2YJ3 A;  3B9B A;  3W5D A;  5AW7 A;  3GWI A;  2OA0 A;  1IWO A;  1MO8 A;  3AR5 A;  5AVT A;  4UMV A;  3NAN A;  4BBJ A;  5AW0 A;  2AGV A;  2ZXE A;  3AR8 A;  3BA6 A;  5AVR A;  5AVZ A;  5AVS A;  1T5S A;  5AW2 A;  4BEV A;  3W5B A;  5AVQ A;  2ZBG A;  4NAB A;  1XP5 A;  2DQS A;  4Y3U A;  5AVU A;  3SKY A;  2BY4 A;  2ZBD A;  4J2T A;  2B8E A;  5AW3 A;  2EAR A;  3AR7 A;  3AR2 A;  4HYT A;  4H1W A;  4YCL A;  5AVV A;  3TLM A;  3FGO A;  1Q3I A;  3FPB A;  3KDP A;  3N5K A;  4UU0 A;  5AW6 A;  2EAU A;  3RFU A;  2YJ6 A;  4BEW A;  5A3S A;  3SKX A;  1SVJ A;  3AR3 A;  3WGU A;  1SU4 A;  1T5T A;  3W5C A;  4YCN A;  4RET A;  4XOU A;  5AW1 A;  2A29 A;  2EAT A;  2C9M A;  3NAM A;  4RES A;  4UU1 A;  2YJ5 A;  3N8G A;  3A1C A;  2C8L A;  5AW9 A;  3A1D A;  4BYG A;  2ZBE A;  2ARF A;  5A3Q A;  2C8K A;  2O9J A;  3W5A A; 
#chains in the Genus database with same CATH homology
 1U7Q A;  5AW4 A;  1WPG A;  2C88 A;  3A3Y A;  2KMX A;  3B8E A;  3AR9 A;  3A1E A;  4YCM A;  2A00 A;  5AW5 A;  5A3R A;  5AVW A;  3AR6 A;  4KYT A;  2YFY A;  2ZBF A;  5AVY A;  4XE5 A;  2IYE A;  3FPS A;  5AW8 A;  3J7T A;  3WGV A;  2KMV A;  3NAL A;  3B9R A;  2YJ4 A;  1MO7 A;  5AVX A;  1VFP A;  3AR4 A;  2YJ3 A;  3B9B A;  3W5D A;  5AW7 A;  3GWI A;  2OA0 A;  1IWO A;  1MO8 A;  3AR5 A;  5AVT A;  4UMV A;  3NAN A;  4BBJ A;  5AW0 A;  2AGV A;  2ZXE A;  3AR8 A;  3BA6 A;  5AVR A;  5AVZ A;  5AVS A;  1T5S A;  5AW2 A;  4BEV A;  3W5B A;  5AVQ A;  2ZBG A;  4NAB A;  1XP5 A;  2DQS A;  4Y3U A;  5AVU A;  3SKY A;  2BY4 A;  2ZBD A;  4J2T A;  2B8E A;  5AW3 A;  2EAR A;  3AR7 A;  3AR2 A;  4HYT A;  4H1W A;  4YCL A;  5AVV A;  3TLM A;  3FGO A;  1Q3I A;  3FPB A;  3KDP A;  3N5K A;  4UU0 A;  5AW6 A;  2EAU A;  3RFU A;  2YJ6 A;  4BEW A;  5A3S A;  3SKX A;  1SVJ A;  3AR3 A;  3WGU A;  1SU4 A;  1T5T A;  3W5C A;  4YCN A;  4RET A;  4XOU A;  5AW1 A;  2A29 A;  2EAT A;  2C9M A;  3NAM A;  4RES A;  4UU1 A;  2YJ5 A;  3N8G A;  3A1C A;  2C8L A;  5AW9 A;  3A1D A;  4BYG A;  2ZBE A;  2ARF A;  5A3Q A;  2C8K A;  2O9J A;  3W5A A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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