1QXZA

Crystal structure of s. aureus methionine aminopeptidase in complex with a ketoheterocycle inhibitor 119
Total Genus 81
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
81
sequence length
249
structure length
249
Chain Sequence
MIVKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVIKNLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVTKDGPILTTKI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structures of staphylococcusaureus methionine aminopeptidase complexed with keto heterocycle and aminoketone inhibitors reveal the formation of a tetrahedral intermediate.
pubmed doi rcsb
molecule keywords methionyl aminopeptidase
source organism Staphylococcus aureus
molecule tags Hydrolase
total genus 81
structure length 249
sequence length 249
ec nomenclature ec 3.4.11.18: Methionyl aminopeptidase.
pdb deposition date 2003-09-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 1qxzA00
4FO8A 4PV4A 1XGSA 3FMQA 1B6AA 2OKNA 2EA4A 3BIQA 3IG4A 2B3HA 4FO7A 2BWXA 5JI6A 3MR1A 3Q6DA 4PNCA 2Q92A 1M35A 2BWSA 4ZWOA 1KQ0A 4IKSA 4U6JA 1QXWA 2BHDA 2BHBA 1N51A 2IW2A 4A6VA 2GTXA 4S2TP 5CIKA 4S00A 3MX6A 2B3KA 1YW7A 2HOWA 5D6FA 4ZNGA 1R58A 3TAVA 2P9AA 4FKCA 4FLJA 5CE6A 1XGOA 2BWYA 3PKAA 2GG2A 3CTZA 2GU7A 1R5GA 4MATA 4IF7A 2Q93A 3S6BA 4U6EA 4A6WA 2V3YA 4U76A 2EVCA 1XNZA 2BWWA 2GG0A 3BIPA 3L7GA 3PKEA 4R60A 4KM3A 2Q94A 4IU6A 1YW9A 4B28A 2BB7A 1C22A 1C27A 2P99A 2GG3A 4FUKA 4IKTA 1XGMA 1WY2A 4U6CA 2BWUA 1C23A 1MATA 3TB5A 4OOKA 5FCFA 1WBQA 1QXYA 5CDEA 4ZWUA 1WLRA 2GU5A 4U6ZA 4U71A 5JHUA 2EVOA 1C24A 1W2MA 1WL6A 5CDVA 1XGNA 2NQ7A 4FLKA 3CB5A 2EA2A 2GG9A 2V6CA 1KP0A 1PV9A 2EVMA 4S01A 1C21A 1Y1NA 3PKDA 4HXXA 2DFIA 2GGBA 4JUQA 3IU9A 2BWTA 4IECA 1WL9A 2V3XA 2MATA 1CHMA 1YJ3A 2NQ6A 3D27A 2G6PA 2P98A 4FLLA 2GU4A 2ADUA 4IKUA 3BITA 4QR8A 2GG7A 2GG8A 2BN7A 1A16A 1QZYA 5E5BA 4IPAA 5FCHA 2BH3A 2BHAA 3RORA 4RZZA 1QXZA 4RGZ1 4U69A 5D6EA 5CDLA 1BN5A 3CB6A 1BOAA 4U73A 1YW8A 3PKBA 5CNXA 2GZ5A 3L24A 3FMRA 3PKCA 1O0XA 2GG5A 2BWVA 2Q8KA 3FM3A 1B59A 2Q95A 5CLSA 1KQ9A 4FLIA 2B3LA 2GA2A 4U1BA 2Q96A 3IU7A 1R5HA 2OAZA 4S2RP 5JFRA 2V3ZA 4IDYA 3IU8A 2BHCA 4Z7MA 2ZSGA 1YVMA 2GU6A 2GGCA 4U75A 3RVAA 1W7VA 4IKRA 1WKMA 4U70A 1JAWA 3MATA 4RZYA 4EGEA 4ZWPA 1WN1A 4U6WA
chains in the Genus database with same CATH superfamily
4FO8A 4PV4A 1XGSA 3FMQA 1B6AA 2OKNA 2EA4A 3BIQA 3IG4A 2B3HA 4FO7A 2BWXA 5JI6A 3MR1A 3Q6DA 4PNCA 2Q92A 1M35A 2BWSA 4ZWOA 1KQ0A 4IKSA 4U6JA 1QXWA 2BHDA 2BHBA 1N51A 2IW2A 4A6VA 2GTXA 4S2TP 5CIKA 4S00A 3MX6A 2B3KA 1YW7A 2HOWA 5D6FA 4ZNGA 1R58A 3TAVA 2P9AA 4FKCA 4FLJA 5CE6A 1XGOA 2BWYA 3PKAA 2GG2A 3CTZA 2GU7A 1R5GA 4MATA 4IF7A 2Q93A 3S6BA 4U6EA 4A6WA 2V3YA 4U76A 2EVCA 1XNZA 2BWWA 2GG0A 3BIPA 3L7GA 3PKEA 4R60A 4KM3A 2Q94A 4IU6A 1YW9A 4B28A 2BB7A 1C22A 1C27A 2P99A 2GG3A 4FUKA 4IKTA 1XGMA 1WY2A 4U6CA 2BWUA 1C23A 1MATA 3TB5A 4OOKA 5FCFA 1WBQA 1QXYA 5CDEA 4ZWUA 1WLRA 2GU5A 4U6ZA 4U71A 5JHUA 2EVOA 1C24A 1W2MA 1WL6A 5CDVA 1XGNA 2NQ7A 4FLKA 3CB5A 2EA2A 2GG9A 2V6CA 1KP0A 1PV9A 2EVMA 4S01A 1C21A 1Y1NA 3PKDA 4HXXA 2DFIA 2GGBA 4JUQA 3IU9A 2BWTA 4IECA 1WL9A 2V3XA 2MATA 1CHMA 1YJ3A 2NQ6A 3D27A 2G6PA 2P98A 4FLLA 2GU4A 2ADUA 4IKUA 3BITA 4QR8A 2GG7A 2GG8A 2BN7A 1A16A 1QZYA 5E5BA 4IPAA 5FCHA 2BH3A 2BHAA 3RORA 4RZZA 1QXZA 4RGZ1 4U69A 5D6EA 5CDLA 1BN5A 3CB6A 1BOAA 4U73A 1YW8A 3PKBA 5CNXA 2GZ5A 3L24A 3FMRA 3PKCA 1O0XA 2GG5A 2BWVA 2Q8KA 3FM3A 1B59A 2Q95A 5CLSA 1KQ9A 4FLIA 2B3LA 2GA2A 4U1BA 2Q96A 3IU7A 1R5HA 2OAZA 4S2RP 5JFRA 2V3ZA 4IDYA 3IU8A 2BHCA 4Z7MA 2ZSGA 1YVMA 2GU6A 2GGCA 4U75A 3RVAA 1W7VA 4IKRA 1WKMA 4U70A 1JAWA 3MATA 4RZYA 4EGEA 4ZWPA 1WN1A 4U6WA
chains in the Genus database with same CATH topology
4FO8A 4PV4A 1XGSA 3FMQA 1B6AA 2OKNA 2EA4A 3BIQA 3IG4A 2B3HA 4FO7A 2BWXA 5JI6A 3MR1A 3Q6DA 4PNCA 2Q92A 1M35A 2BWSA 4ZWOA 1KQ0A 4IKSA 4U6JA 1QXWA 2BHDA 2BHBA 1N51A 2IW2A 4A6VA 2GTXA 4S2TP 5CIKA 4S00A 3MX6A 2B3KA 1YW7A 2HOWA 5D6FA 4ZNGA 1R58A 3TAVA 2P9AA 4FKCA 4FLJA 5CE6A 1XGOA 2BWYA 3PKAA 2GG2A 3CTZA 2GU7A 1R5GA 4MATA 4IF7A 2Q93A 3S6BA 4U6EA 4A6WA 2V3YA 4U76A 2EVCA 1XNZA 2BWWA 2GG0A 3BIPA 3L7GA 3PKEA 4R60A 4KM3A 2Q94A 4IU6A 1YW9A 4B28A 2BB7A 1C22A 1C27A 2P99A 2GG3A 4FUKA 4IKTA 1XGMA 1WY2A 4U6CA 2BWUA 1C23A 1MATA 3TB5A 4OOKA 5FCFA 1WBQA 1QXYA 5CDEA 4ZWUA 1WLRA 2GU5A 4U6ZA 4U71A 5JHUA 2EVOA 1C24A 1W2MA 1WL6A 5CDVA 1XGNA 2NQ7A 4FLKA 3CB5A 2EA2A 2GG9A 2V6CA 1KP0A 1PV9A 2EVMA 4S01A 1C21A 1Y1NA 3PKDA 4HXXA 2DFIA 2GGBA 4JUQA 3IU9A 2BWTA 4IECA 1WL9A 2V3XA 2MATA 1CHMA 1YJ3A 2NQ6A 3D27A 2G6PA 2P98A 4FLLA 2GU4A 2ADUA 4IKUA 3BITA 4QR8A 2GG7A 2GG8A 2BN7A 1A16A 1QZYA 5E5BA 4IPAA 5FCHA 2BH3A 2BHAA 3RORA 4RZZA 1QXZA 4RGZ1 4U69A 5D6EA 5CDLA 1BN5A 3CB6A 1BOAA 4U73A 1YW8A 3PKBA 5CNXA 2GZ5A 3L24A 3FMRA 3PKCA 1O0XA 2GG5A 2BWVA 2Q8KA 3FM3A 1B59A 2Q95A 5CLSA 1KQ9A 4FLIA 2B3LA 2GA2A 4U1BA 2Q96A 3IU7A 1R5HA 2OAZA 4S2RP 5JFRA 2V3ZA 4IDYA 3IU8A 2BHCA 4Z7MA 2ZSGA 1YVMA 2GU6A 2GGCA 4U75A 3RVAA 1W7VA 4IKRA 1WKMA 4U70A 1JAWA 3MATA 4RZYA 4EGEA 4ZWPA 1WN1A 4U6WA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4FO8 A;  4PV4 A;  1XGS A;  3FMQ A;  1B6A A;  2OKN A;  2EA4 A;  3BIQ A;  3IG4 A;  2B3H A;  4FO7 A;  2BWX A;  5JI6 A;  3MR1 A;  3Q6D A;  4PNC A;  2Q92 A;  1M35 A;  2BWS A;  4ZWO A;  1KQ0 A;  4IKS A;  4U6J A;  1QXW A;  2BHD A;  2BHB A;  1N51 A;  2IW2 A;  4A6V A;  2GTX A;  4S2T P;  5CIK A;  4S00 A;  3MX6 A;  2B3K A;  1YW7 A;  2HOW A;  5D6F A;  4ZNG A;  1R58 A;  3TAV A;  2P9A A;  4FKC A;  4FLJ A;  5CE6 A;  1XGO A;  2BWY A;  3PKA A;  2GG2 A;  3CTZ A;  2GU7 A;  1R5G A;  4MAT A;  4IF7 A;  2Q93 A;  3S6B A;  4U6E A;  4A6W A;  2V3Y A;  4U76 A;  2EVC A;  1XNZ A;  2BWW A;  2GG0 A;  3BIP A;  3L7G A;  3PKE A;  4R60 A;  4KM3 A;  2Q94 A;  4IU6 A;  1YW9 A;  4B28 A;  2BB7 A;  1C22 A;  1C27 A;  2P99 A;  2GG3 A;  4FUK A;  4IKT A;  1XGM A;  1WY2 A;  4U6C A;  2BWU A;  1C23 A;  1MAT A;  3TB5 A;  4OOK A;  5FCF A;  1WBQ A;  1QXY A;  5CDE A;  4ZWU A;  1WLR A;  2GU5 A;  4U6Z A;  4U71 A;  5JHU A;  2EVO A;  1C24 A;  1W2M A;  1WL6 A;  5CDV A;  1XGN A;  2NQ7 A;  4FLK A;  3CB5 A;  2EA2 A;  2GG9 A;  2V6C A;  1KP0 A;  1PV9 A;  2EVM A;  4S01 A;  1C21 A;  1Y1N A;  3PKD A;  4HXX A;  2DFI A;  2GGB A;  4JUQ A;  3IU9 A;  2BWT A;  4IEC A;  1WL9 A;  2V3X A;  2MAT A;  1CHM A;  1YJ3 A;  2NQ6 A;  3D27 A;  2G6P A;  2P98 A;  4FLL A;  2GU4 A;  2ADU A;  4IKU A;  3BIT A;  4QR8 A;  2GG7 A;  2GG8 A;  2BN7 A;  1A16 A;  1QZY A;  5E5B A;  4IPA A;  5FCH A;  2BH3 A;  2BHA A;  3ROR A;  4RZZ A;  1QXZ A;  4RGZ 1;  4U69 A;  5D6E A;  5CDL A;  1BN5 A;  3CB6 A;  1BOA A;  4U73 A;  1YW8 A;  3PKB A;  5CNX A;  2GZ5 A;  3L24 A;  3FMR A;  3PKC A;  1O0X A;  2GG5 A;  2BWV A;  2Q8K A;  3FM3 A;  1B59 A;  2Q95 A;  5CLS A;  1KQ9 A;  4FLI A;  2B3L A;  2GA2 A;  4U1B A;  2Q96 A;  3IU7 A;  1R5H A;  2OAZ A;  4S2R P;  5JFR A;  2V3Z A;  4IDY A;  3IU8 A;  2BHC A;  4Z7M A;  2ZSG A;  1YVM A;  2GU6 A;  2GGC A;  4U75 A;  3RVA A;  1W7V A;  4IKR A;  1WKM A;  4U70 A;  1JAW A;  3MAT A;  4RZY A;  4EGE A;  4ZWP A;  1WN1 A;  4U6W A; 
#chains in the Genus database with same CATH topology
 4FO8 A;  4PV4 A;  1XGS A;  3FMQ A;  1B6A A;  2OKN A;  2EA4 A;  3BIQ A;  3IG4 A;  2B3H A;  4FO7 A;  2BWX A;  5JI6 A;  3MR1 A;  3Q6D A;  4PNC A;  2Q92 A;  1M35 A;  2BWS A;  4ZWO A;  1KQ0 A;  4IKS A;  4U6J A;  1QXW A;  2BHD A;  2BHB A;  1N51 A;  2IW2 A;  4A6V A;  2GTX A;  4S2T P;  5CIK A;  4S00 A;  3MX6 A;  2B3K A;  1YW7 A;  2HOW A;  5D6F A;  4ZNG A;  1R58 A;  3TAV A;  2P9A A;  4FKC A;  4FLJ A;  5CE6 A;  1XGO A;  2BWY A;  3PKA A;  2GG2 A;  3CTZ A;  2GU7 A;  1R5G A;  4MAT A;  4IF7 A;  2Q93 A;  3S6B A;  4U6E A;  4A6W A;  2V3Y A;  4U76 A;  2EVC A;  1XNZ A;  2BWW A;  2GG0 A;  3BIP A;  3L7G A;  3PKE A;  4R60 A;  4KM3 A;  2Q94 A;  4IU6 A;  1YW9 A;  4B28 A;  2BB7 A;  1C22 A;  1C27 A;  2P99 A;  2GG3 A;  4FUK A;  4IKT A;  1XGM A;  1WY2 A;  4U6C A;  2BWU A;  1C23 A;  1MAT A;  3TB5 A;  4OOK A;  5FCF A;  1WBQ A;  1QXY A;  5CDE A;  4ZWU A;  1WLR A;  2GU5 A;  4U6Z A;  4U71 A;  5JHU A;  2EVO A;  1C24 A;  1W2M A;  1WL6 A;  5CDV A;  1XGN A;  2NQ7 A;  4FLK A;  3CB5 A;  2EA2 A;  2GG9 A;  2V6C A;  1KP0 A;  1PV9 A;  2EVM A;  4S01 A;  1C21 A;  1Y1N A;  3PKD A;  4HXX A;  2DFI A;  2GGB A;  4JUQ A;  3IU9 A;  2BWT A;  4IEC A;  1WL9 A;  2V3X A;  2MAT A;  1CHM A;  1YJ3 A;  2NQ6 A;  3D27 A;  2G6P A;  2P98 A;  4FLL A;  2GU4 A;  2ADU A;  4IKU A;  3BIT A;  4QR8 A;  2GG7 A;  2GG8 A;  2BN7 A;  1A16 A;  1QZY A;  5E5B A;  4IPA A;  5FCH A;  2BH3 A;  2BHA A;  3ROR A;  4RZZ A;  1QXZ A;  4RGZ 1;  4U69 A;  5D6E A;  5CDL A;  1BN5 A;  3CB6 A;  1BOA A;  4U73 A;  1YW8 A;  3PKB A;  5CNX A;  2GZ5 A;  3L24 A;  3FMR A;  3PKC A;  1O0X A;  2GG5 A;  2BWV A;  2Q8K A;  3FM3 A;  1B59 A;  2Q95 A;  5CLS A;  1KQ9 A;  4FLI A;  2B3L A;  2GA2 A;  4U1B A;  2Q96 A;  3IU7 A;  1R5H A;  2OAZ A;  4S2R P;  5JFR A;  2V3Z A;  4IDY A;  3IU8 A;  2BHC A;  4Z7M A;  2ZSG A;  1YVM A;  2GU6 A;  2GGC A;  4U75 A;  3RVA A;  1W7V A;  4IKR A;  1WKM A;  4U70 A;  1JAW A;  3MAT A;  4RZY A;  4EGE A;  4ZWP A;  1WN1 A;  4U6W A; 
#chains in the Genus database with same CATH homology
 4FO8 A;  4PV4 A;  1XGS A;  3FMQ A;  1B6A A;  2OKN A;  2EA4 A;  3BIQ A;  3IG4 A;  2B3H A;  4FO7 A;  2BWX A;  5JI6 A;  3MR1 A;  3Q6D A;  4PNC A;  2Q92 A;  1M35 A;  2BWS A;  4ZWO A;  1KQ0 A;  4IKS A;  4U6J A;  1QXW A;  2BHD A;  2BHB A;  1N51 A;  2IW2 A;  4A6V A;  2GTX A;  4S2T P;  5CIK A;  4S00 A;  3MX6 A;  2B3K A;  1YW7 A;  2HOW A;  5D6F A;  4ZNG A;  1R58 A;  3TAV A;  2P9A A;  4FKC A;  4FLJ A;  5CE6 A;  1XGO A;  2BWY A;  3PKA A;  2GG2 A;  3CTZ A;  2GU7 A;  1R5G A;  4MAT A;  4IF7 A;  2Q93 A;  3S6B A;  4U6E A;  4A6W A;  2V3Y A;  4U76 A;  2EVC A;  1XNZ A;  2BWW A;  2GG0 A;  3BIP A;  3L7G A;  3PKE A;  4R60 A;  4KM3 A;  2Q94 A;  4IU6 A;  1YW9 A;  4B28 A;  2BB7 A;  1C22 A;  1C27 A;  2P99 A;  2GG3 A;  4FUK A;  4IKT A;  1XGM A;  1WY2 A;  4U6C A;  2BWU A;  1C23 A;  1MAT A;  3TB5 A;  4OOK A;  5FCF A;  1WBQ A;  1QXY A;  5CDE A;  4ZWU A;  1WLR A;  2GU5 A;  4U6Z A;  4U71 A;  5JHU A;  2EVO A;  1C24 A;  1W2M A;  1WL6 A;  5CDV A;  1XGN A;  2NQ7 A;  4FLK A;  3CB5 A;  2EA2 A;  2GG9 A;  2V6C A;  1KP0 A;  1PV9 A;  2EVM A;  4S01 A;  1C21 A;  1Y1N A;  3PKD A;  4HXX A;  2DFI A;  2GGB A;  4JUQ A;  3IU9 A;  2BWT A;  4IEC A;  1WL9 A;  2V3X A;  2MAT A;  1CHM A;  1YJ3 A;  2NQ6 A;  3D27 A;  2G6P A;  2P98 A;  4FLL A;  2GU4 A;  2ADU A;  4IKU A;  3BIT A;  4QR8 A;  2GG7 A;  2GG8 A;  2BN7 A;  1A16 A;  1QZY A;  5E5B A;  4IPA A;  5FCH A;  2BH3 A;  2BHA A;  3ROR A;  4RZZ A;  1QXZ A;  4RGZ 1;  4U69 A;  5D6E A;  5CDL A;  1BN5 A;  3CB6 A;  1BOA A;  4U73 A;  1YW8 A;  3PKB A;  5CNX A;  2GZ5 A;  3L24 A;  3FMR A;  3PKC A;  1O0X A;  2GG5 A;  2BWV A;  2Q8K A;  3FM3 A;  1B59 A;  2Q95 A;  5CLS A;  1KQ9 A;  4FLI A;  2B3L A;  2GA2 A;  4U1B A;  2Q96 A;  3IU7 A;  1R5H A;  2OAZ A;  4S2R P;  5JFR A;  2V3Z A;  4IDY A;  3IU8 A;  2BHC A;  4Z7M A;  2ZSG A;  1YVM A;  2GU6 A;  2GGC A;  4U75 A;  3RVA A;  1W7V A;  4IKR A;  1WKM A;  4U70 A;  1JAW A;  3MAT A;  4RZY A;  4EGE A;  4ZWP A;  1WN1 A;  4U6W A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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