1R9TC

Rna polymerase ii strand separated elongation complex, mismatched nucleotide
Total Genus 42
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords RNA strand
publication title Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center.
pubmed doi rcsb
molecule tags Transcription/dna-rna hybrid
total genus 42
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2003-10-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 1r9tC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 1r9tC01
4QIWD 4OIQA 3M4OC 4C3HK 2WB1D 3S2HK 4BBRK 3GTJK 4X6AC 3M4OK 4A3CK 3HOWC 4XLNA 4G7HA 2E2JC 4A3GC 2NVYK 1K83C 4LK1A 5FJ8K 3S14K 1I6VA 2E2IC 4BY1C 3S1QC 2NVTC 4BY1K 3S1QK 4YFXA 3HKZD 2NVTK 2CW0A 2NVQC 4ZH4A 2NVQK 3S1RK 1TWFK 1SFOK 3PO2C 4A3JK 5C44C 5M5YK 1IW7A 3PO2K 3M3YC 3GTKK 3M3YK 1TWGC 4BY7C 3S1MK 3S1NK 4OINA 2PMZD 1TWGK 3PO3K 3H3VL 4BY7K 2YU9K 1I3QC 4AYBD 3GTMC 3CQZK 5C4XK 3HOYC 3HOXK 3GTMK 2JA5K 3S15C 1I50K 4LK0A 2JA8K 3DXJA 3I4MC 2O5JA 4A3EK 5TMCA 3EQLA 2B63C 2Y0SL 3S15K 4BXXK 3S17C 2VUMC 4LJZA 4A3FK 1ZYRA 2B63K 3S17K 2VUMK 4X6AK 3S2DC 3HOWK 2R92C 4C3IC 3HOVC 2E2JK 1HQMA 4C3IK 3HOVK 4A3GK 2A68A 1K83K 2JA6C 3I4NC 2E2IK 2JA6K 5TMFA 1Y1VC 1YNJA 4MQ9A 4BBSC 4YFKA 4MEYA 2R7ZC 4BBSK 4Y52C 2PA8D 3RZDC 4A3DC 2R7ZK 2A6EA 3RZDK 4Y52K 5C44K 3HOZC 1SMYA 1TWHC 5IP7C 1TWHK 4A3MC 4XSZA 4G7OA 2NVXC 2PMZL 1I3QK 4A3MK 3H0GC 4Y7NC 3GTQC 5M5WK 3HOYK 3H0GK 4Y7NK 4LLGA 4OIRA 1Y1WC 3I4MK 4JK1A 4MEXA 1Y1WK 2WAQL 4QIWL 4G7ZA 2WB1L 4OIOA 3RZOC 4A93C 5C3EC 3RZOK 1I6HC 3S2DK 4KN7A 4YG2A 1I6HK 4A3IC 2R92K 2JA7C 4A3IK 4QJVB 1TWCC 5FLMC 5IP9C 2JA7K 3K7AC 5M3FK 3I4NK 3GTOC 1WCMC 3GTOK 1BDFA 5IYBC 2E2HC 3H3VD 1Y1VK 3HKZL 4XLPA 4NOIA 3HOUC 4C3JC 2R93C 4A3DK 3GTLC 2R93K 1TWAC 2Y0SD 3GTLK 3HOZK 3FKIC 1TWAK 3GTPC 4GZYA 3FKIK 5IP7K 5M3MK 3S2HC 4BBRC 4Q4ZA 3GTJC 3GTPK 2O5IA 4C2MC 2NVXK 4AYBL 2PPBA 4A3CC 4C2MK 4Q5SA 3GTQK 4QJVA 5D4DA 2A69A 2NVYC 3S14C 4KN4A 4A3KC 4A3KK 3GTGC 3S16C 4OIPA 4A93K 1R9TC 3GTGK 5C3EK 3S16K 1R9TK 3S1RC 1TWFC 4YFNA 1SFOC 3WODA 4A3JC 4XSXA 1XPPA 1YNNA 2A6HA 1TWCK 5IP9K 5FLMK 3GTKC 3S1MC 5C4JC 3PO3C 3K7AK 3S1NC 5M5XK 5C4JK 1WCMK 2YU9C 4KMUA 5IYBK 2E2HK 2BE5A 5IYDC 3HOXC 3CQZC 5C4XC 5IYCC 4A3BC 2JA5C 5IYDK 1I50C 2PA8L 2JA8C 5IYCK 4C3JK 3HOUK 4BXXC 4A3EC 4A3LC 4A3BK 4A3LK 4C3HC 4A3FC 2WAQD
chains in the Genus database with same CATH superfamily
4OIQA 3M4OC 3S2HK 1I3QA 3M4OK 3T00A 3L4JA 3GTMA 4A3CK 3HOWC 4LK1A 5FJ8K 3S14K 2VUMA 2E2IC 4BY1C 3S1QC 5TJ3A 4P9SA 5IORA 4BY1K 3S1QK 1EFWA 2L5NA 5C44C 1IW7A 3M3YC 3M3YK 1TWGC 3S1NK 2PMZD 1TWGK 1O25A 2KXYA 1G51A 5C4XK 2R7ZA 1FEUA 4A3EK 2B63C 3GSIA 4WJ4A 1TWHA 2B63K 2V6TA 1IL2A 3S2DC 5DM6S 2RGRA 2D6FC 4C3IC 2E2JK 4C3IK 4FZBA 5TMFA 1YNJA 4MQ9A 3GEHA 1ZQ1C 4DDQA 2JA7A 1WSVA 3HOZC 1O2BA 4WFNS 2GSOA 5IP7C 1IE0A 5HL8A 4A3MC 2PMZL 4A3MK 5IOTA 1ISEA 5M5WK 1F7UA 1ZBSA 4KMHA 1Y1WC 1DCOA 1EK8A 1Y1WK 2WAQL 4QIWL 3S0XA 3GTPA 3A8JA 2GSNA 1B4AA 4KMDA 3GTJA 4KN7A 3AH5A 2RH6A 1TWCC 3G4AA 1JVIA 5JVOA 3GTGA 3H3VD 1ZVUA 2XCQA 4XLPA 1X31C 1TWFA 4C3JC 4KB4A 1BJTA 3N0CA 2YU9A 2O5IA 5JVGS 4AYBL 3GTQK 4QJVA 5D4DA 5EGEA 1VGXA 4KB2A 2NVYC 4KN4A 2L3UA 1VLOA 3S16C 1R9TC 5C3EK 3S16K 1EI6A 1R9TK 4PABA 3S1RC 1SFOC 3TFIA 4A3JC 3ADAC 3FOEA 4IOAS 3GTKC 3S1MC 5C4JC 3K7AK 5C4JK 1WCMK 2E2HK 3HOXC 3CQZC 4LOWA 2KPUA 2P5MA 2JA5C 1I50C 3HOUK 4PAAA 4A3LC 4GTCA 4A3LK 4A3FC 2WB1D 4WJ3M 2JA5A 4G7HA 2GAGC 1K83C 1J6VA 4ZH4A 1B4BA 5L46A 3QX3A 3A8IA 2JA6A 4BY7C 4OINA 4BY7K 1I3QC 3GTMC 4BLAA 3GTMK 2JA8K 3DXJA 1ZXOA 2Y0SL 3S17C 2VUMC 2ZUFA 1XXCA 3S17K 2VUMK 3BP8C 2ZUEA 2NVXA 3H0GA 5JVHS 4KARA 3HOWK 2R92C 4XCHA 1HQMA 3I4NC 5IOSA 2E2IK 1VH2A 1Y1VC 1DCPA 1JQWA 2ZJQS 2R7ZC 2R92A 4G0VA 3RZDC 2PA8D 2R7ZK 4A3DC 3PIPS 2A6EA 2Y3PA 5HL7S 1O2FB 3G4CA 5C44K 3RZDK 3GEEA 1SMYA 3AQPA 1TWHC 1Y1VA 2W7VA 1TWHK 4G7OA 4Y7NC 1EH1A 4Y7NK 3GDZA 4LLGA 1TWAA 3TTGA 4MEXA 3FKIA 4G7ZA 2GSUA 3N0BA 4O2DA 1EQRA 3LPXA 4A93C 3S2DK 2JA7C 2JA7K 1BS2A 5JFEA 4GTAA 1HI9A 5IYBC 4WCES 3V4GA 1C0AA 1J98A 4GTLA 3HOZK 2XCOA 4LQYA 3GTPC 5IP7K 4BBRC 4Q4ZA 3GTJC 1DCHA 3GTPK 4Q5SA 1VJEA 1VRQC 2A69A 1YX2A 4A3KC 3GIRA 1F9NA 4A3KK 1DD5A 3GTGC 3LYWA 3GTGK 1TWFC 4YFNA 1TWCK 3PO3C 2YU9C 2BE5A 5IYDC 5IYCC 5IYDK 5IYCK 4C3JK 4BXXC 3T01A 1KQ4A 4X6AC 2P8TA 4XLNA 4A3GC 2NVYK 4WFAS 4IO9S 4GTEA 3A8KA 4LR2A 4YFXA 3HKZD 3PIOS 2NVQC 2NVQK 3S1RK 1SFOK 4M1XA 3PO2C 5IOQA 4A3JK 5M5YK 3PO2K 1O26A 3GTKK 3S1MK 2EBBA 1WORA 3H3VL 2XCRB 4FM9A 4C45A 3HOXK 3CQZK 3HOYC 1O24A 2JA5K 1I50K 3I4MC 1RU0A 3EQLA 3FHZA 4IOCS 4LJZA 4A3FK 2V6UA 4P5AA 4G0WA 1XZPA 3GTQA 2CFAA 3Q3QA 1V5VA 1K83K 3AD7C 2JA6C 3NUHA 2JA6K 1J6XA 3IPJA 1J6WA 1L0WA 3OPFA 1XZPB 4BBSC 4YFKA 4MEYA 5CJ9A 4BBSK 4Y52C 2CFAB 3SZZA 4Y52K 1WIHA 3CF5S 4KM9A 4J3NA 3GTOA 1WCMA 3LAJA 1F7VA 2E2HA 1USOA 2NVXC 1I3QK 3H0GC 3H0GK 2GAHC 2R93A 3GTLA 4GFQA 3SZYA 3TFHA 2WB1L 4OIOA 3RZOC 3RZOK 1I6HC 1O27A 3FOFA 1I6HK 4BLBA 2R92K 5IP9C 5FLMC 5M3FK 3I4NK 3LAPA 1BDFA 1Y1VK 4AH6A 4NOIA 4A3DK 3L4KA 1TWAC 3FKIC 1TWAK 4GZYA 3FKIK 5M3MK 3S2HC 1YCLA 4C2MC 1WOPA 3ERED 2PPBA 4A3CC 3BP3A 4C2MK 3S14C 3VA7A 3BUEA 4A93K 1WQGA 3WODA 4XSXA 1XPPA 1YNNA 1WOSA 2E2IA 3S1NC 3HXAA 5IYBK 4WF9S 5C4XC 4A3BC 4G0UA 2PA8L 4A3BK 4A3EC 4C3HC 5HQHA 1TWGA 2WAQD 4QIWD 1XZQA 4KC6A 4C3HK 4BBRK 3GTJK 3T02A 2E2JC 5E68A 2B63A 1I6VA 2NVTC 1XZQB 2NVTK 4ILDA 2CW0A 4U67S 1WOOA 1TWFK 3PO3K 2V6SA 2KQ1A 2YU9K 1IBAA 4AYBD 1UV7A 4KASA 1O2AA 3AQOA 3S15C 4LK0A 2O5JA 1IQ0A 3S15K 4BXXK 5TMCA 2ZJRS 1ZYRA 4KATA 1F93A 2KWAA 4X6AK 3TFJA 2FQOA 3GEIA 3MMLB 3HOVC 4A3GK 1Y1WA 3HOVK 1O29A 2A68A 3OEPA 1PJ5A 1O28A 3CAGA 1TWCA 4GTFA 1XXAA 4GTBA 4XSZA 1GE9A 5CHPA 3GTQC 1PJ7A 3HOYK 4OIRA 3I4MK 4JK1A 1BGWA 1WSRA 1PJ6A 4RMFA 5C3EC 4YG2A 4A3IC 4A3IK 2NVYA 2JH3A 3OREA 4QJVB 3K7AC 1INNA 3GTOC 1WCMC 3GTOK 3HKZL 2E2HC 1JOEA 1R9TA 1SFOA 3HOUC 2R93C 3GTLC 2R93K 2PHCB 3GTLK 2Y0SD 3GTKA 4KDDA 2NVXK 3CQZA 1USMA 1I50A 5EGHA 3JSTA 3DLLS 1WQFA 4WFBS 1WQHA 4OIPA 2FQTA 4GT9A 2ZFZA 1K83A 2A6HA 5IP9K 5DM7S 4BKWA 3AD8C 5FLMK 4KM8A 5M5XK 1XXBA 4KAWX 4WILA 4KMUA 4P5BA 1AB4A 3N3YA 1IS1A 2JA8C 2ZJPS 3AD9C 4KMAA 4GTDA
chains in the Genus database with same CATH topology
4QIWD 4OIQA 3M4OC 4C3HK 2WB1D 3S2HK 4BBRK 3GTJK 4X6AC 3M4OK 4A3CK 3HOWC 4XLNA 4G7HA 2E2JC 4A3GC 2NVYK 1K83C 4LK1A 5FJ8K 3S14K 1I6VA 2E2IC 4BY1C 3S1QC 2NVTC 4BY1K 3S1QK 4YFXA 3HKZD 2NVTK 2CW0A 2NVQC 4ZH4A 2NVQK 3S1RK 1TWFK 1SFOK 3PO2C 4A3JK 5C44C 5M5YK 1IW7A 3PO2K 3M3YC 3GTKK 3M3YK 1TWGC 4BY7C 3S1MK 3S1NK 4OINA 2PMZD 1TWGK 3PO3K 3H3VL 4BY7K 2YU9K 1I3QC 4AYBD 3GTMC 3CQZK 5C4XK 3HOYC 3HOXK 3GTMK 2JA5K 3S15C 1I50K 4LK0A 2JA8K 3DXJA 3I4MC 2O5JA 4A3EK 5TMCA 3EQLA 2B63C 2Y0SL 3S15K 4BXXK 3S17C 2VUMC 4LJZA 4A3FK 1ZYRA 2B63K 3S17K 2VUMK 4X6AK 3S2DC 3HOWK 2R92C 4C3IC 3HOVC 2E2JK 1HQMA 4C3IK 3HOVK 4A3GK 2A68A 1K83K 2JA6C 3I4NC 2E2IK 2JA6K 5TMFA 1Y1VC 1YNJA 4MQ9A 4BBSC 4YFKA 4MEYA 2R7ZC 4BBSK 4Y52C 2PA8D 3RZDC 4A3DC 2R7ZK 2A6EA 3RZDK 4Y52K 5C44K 3HOZC 1SMYA 1TWHC 5IP7C 1TWHK 4A3MC 4XSZA 4G7OA 2NVXC 2PMZL 1I3QK 4A3MK 3H0GC 4Y7NC 3GTQC 5M5WK 3HOYK 3H0GK 4Y7NK 4LLGA 4OIRA 1Y1WC 3I4MK 4JK1A 4MEXA 1Y1WK 2WAQL 4QIWL 4G7ZA 2WB1L 4OIOA 3RZOC 4A93C 5C3EC 3RZOK 1I6HC 3S2DK 4KN7A 4YG2A 1I6HK 4A3IC 2R92K 2JA7C 4A3IK 4QJVB 1TWCC 5FLMC 5IP9C 2JA7K 3K7AC 5M3FK 3I4NK 3GTOC 1WCMC 3GTOK 1BDFA 5IYBC 2E2HC 3H3VD 1Y1VK 3HKZL 4XLPA 4NOIA 3HOUC 4C3JC 2R93C 4A3DK 3GTLC 2R93K 1TWAC 2Y0SD 3GTLK 3HOZK 3FKIC 1TWAK 3GTPC 4GZYA 3FKIK 5IP7K 5M3MK 3S2HC 4BBRC 4Q4ZA 3GTJC 3GTPK 2O5IA 4C2MC 2NVXK 4AYBL 2PPBA 4A3CC 4C2MK 4Q5SA 3GTQK 4QJVA 5D4DA 2A69A 2NVYC 3S14C 4KN4A 4A3KC 4A3KK 3GTGC 3S16C 4OIPA 4A93K 1R9TC 3GTGK 5C3EK 3S16K 1R9TK 3S1RC 1TWFC 4YFNA 1SFOC 3WODA 4A3JC 4XSXA 1XPPA 1YNNA 2A6HA 1TWCK 5IP9K 5FLMK 3GTKC 3S1MC 5C4JC 3PO3C 3K7AK 3S1NC 5M5XK 5C4JK 1WCMK 2YU9C 4KMUA 5IYBK 2E2HK 2BE5A 5IYDC 3HOXC 3CQZC 5C4XC 5IYCC 4A3BC 2JA5C 5IYDK 1I50C 2PA8L 2JA8C 5IYCK 4C3JK 3HOUK 4BXXC 4A3EC 4A3LC 4A3BK 4A3LK 4C3HC 4A3FC 2WAQD
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4QIW D;  4OIQ A;  3M4O C;  4C3H K;  2WB1 D;  3S2H K;  4BBR K;  3GTJ K;  4X6A C;  3M4O K;  4A3C K;  3HOW C;  4XLN A;  4G7H A;  2E2J C;  4A3G C;  2NVY K;  1K83 C;  4LK1 A;  5FJ8 K;  3S14 K;  1I6V A;  2E2I C;  4BY1 C;  3S1Q C;  2NVT C;  4BY1 K;  3S1Q K;  4YFX A;  3HKZ D;  2NVT K;  2CW0 A;  2NVQ C;  4ZH4 A;  2NVQ K;  3S1R K;  1TWF K;  1SFO K;  3PO2 C;  4A3J K;  5C44 C;  5M5Y K;  1IW7 A;  3PO2 K;  3M3Y C;  3GTK K;  3M3Y K;  1TWG C;  4BY7 C;  3S1M K;  3S1N K;  4OIN A;  2PMZ D;  1TWG K;  3PO3 K;  3H3V L;  4BY7 K;  2YU9 K;  1I3Q C;  4AYB D;  3GTM C;  3CQZ K;  5C4X K;  3HOY C;  3HOX K;  3GTM K;  2JA5 K;  3S15 C;  1I50 K;  4LK0 A;  2JA8 K;  3DXJ A;  3I4M C;  2O5J A;  4A3E K;  5TMC A;  3EQL A;  2B63 C;  2Y0S L;  3S15 K;  4BXX K;  3S17 C;  2VUM C;  4LJZ A;  4A3F K;  1ZYR A;  2B63 K;  3S17 K;  2VUM K;  4X6A K;  3S2D C;  3HOW K;  2R92 C;  4C3I C;  3HOV C;  2E2J K;  1HQM A;  4C3I K;  3HOV K;  4A3G K;  2A68 A;  1K83 K;  2JA6 C;  3I4N C;  2E2I K;  2JA6 K;  5TMF A;  1Y1V C;  1YNJ A;  4MQ9 A;  4BBS C;  4YFK A;  4MEY A;  2R7Z C;  4BBS K;  4Y52 C;  2PA8 D;  3RZD C;  4A3D C;  2R7Z K;  2A6E A;  3RZD K;  4Y52 K;  5C44 K;  3HOZ C;  1SMY A;  1TWH C;  5IP7 C;  1TWH K;  4A3M C;  4XSZ A;  4G7O A;  2NVX C;  2PMZ L;  1I3Q K;  4A3M K;  3H0G C;  4Y7N C;  3GTQ C;  5M5W K;  3HOY K;  3H0G K;  4Y7N K;  4LLG A;  4OIR A;  1Y1W C;  3I4M K;  4JK1 A;  4MEX A;  1Y1W K;  2WAQ L;  4QIW L;  4G7Z A;  2WB1 L;  4OIO A;  3RZO C;  4A93 C;  5C3E C;  3RZO K;  1I6H C;  3S2D K;  4KN7 A;  4YG2 A;  1I6H K;  4A3I C;  2R92 K;  2JA7 C;  4A3I K;  4QJV B;  1TWC C;  5FLM C;  5IP9 C;  2JA7 K;  3K7A C;  5M3F K;  3I4N K;  3GTO C;  1WCM C;  3GTO K;  1BDF A;  5IYB C;  2E2H C;  3H3V D;  1Y1V K;  3HKZ L;  4XLP A;  4NOI A;  3HOU C;  4C3J C;  2R93 C;  4A3D K;  3GTL C;  2R93 K;  1TWA C;  2Y0S D;  3GTL K;  3HOZ K;  3FKI C;  1TWA K;  3GTP C;  4GZY A;  3FKI K;  5IP7 K;  5M3M K;  3S2H C;  4BBR C;  4Q4Z A;  3GTJ C;  3GTP K;  2O5I A;  4C2M C;  2NVX K;  4AYB L;  2PPB A;  4A3C C;  4C2M K;  4Q5S A;  3GTQ K;  4QJV A;  5D4D A;  2A69 A;  2NVY C;  3S14 C;  4KN4 A;  4A3K C;  4A3K K;  3GTG C;  3S16 C;  4OIP A;  4A93 K;  1R9T C;  3GTG K;  5C3E K;  3S16 K;  1R9T K;  3S1R C;  1TWF C;  4YFN A;  1SFO C;  3WOD A;  4A3J C;  4XSX A;  1XPP A;  1YNN A;  2A6H A;  1TWC K;  5IP9 K;  5FLM K;  3GTK C;  3S1M C;  5C4J C;  3PO3 C;  3K7A K;  3S1N C;  5M5X K;  5C4J K;  1WCM K;  2YU9 C;  4KMU A;  5IYB K;  2E2H K;  2BE5 A;  5IYD C;  3HOX C;  3CQZ C;  5C4X C;  5IYC C;  4A3B C;  2JA5 C;  5IYD K;  1I50 C;  2PA8 L;  2JA8 C;  5IYC K;  4C3J K;  3HOU K;  4BXX C;  4A3E C;  4A3L C;  4A3B K;  4A3L K;  4C3H C;  4A3F C;  2WAQ D; 
#chains in the Genus database with same CATH topology
 4OIQ A;  3M4O C;  3S2H K;  1I3Q A;  3M4O K;  3T00 A;  3L4J A;  3GTM A;  4A3C K;  3HOW C;  4LK1 A;  5FJ8 K;  3S14 K;  2VUM A;  2E2I C;  4BY1 C;  3S1Q C;  5TJ3 A;  4P9S A;  5IOR A;  4BY1 K;  3S1Q K;  1EFW A;  2L5N A;  5C44 C;  1IW7 A;  3M3Y C;  3M3Y K;  1TWG C;  3S1N K;  2PMZ D;  1TWG K;  1O25 A;  2KXY A;  1G51 A;  5C4X K;  2R7Z A;  1FEU A;  4A3E K;  2B63 C;  3GSI A;  4WJ4 A;  1TWH A;  2B63 K;  2V6T A;  1IL2 A;  3S2D C;  5DM6 S;  2RGR A;  2D6F C;  4C3I C;  2E2J K;  4C3I K;  4FZB A;  5TMF A;  1YNJ A;  4MQ9 A;  3GEH A;  1ZQ1 C;  4DDQ A;  2JA7 A;  1WSV A;  3HOZ C;  1O2B A;  4WFN S;  2GSO A;  5IP7 C;  1IE0 A;  5HL8 A;  4A3M C;  2PMZ L;  4A3M K;  5IOT A;  1ISE A;  5M5W K;  1F7U A;  1ZBS A;  4KMH A;  1Y1W C;  1DCO A;  1EK8 A;  1Y1W K;  2WAQ L;  4QIW L;  3S0X A;  3GTP A;  3A8J A;  2GSN A;  1B4A A;  4KMD A;  3GTJ A;  4KN7 A;  3AH5 A;  2RH6 A;  1TWC C;  3G4A A;  1JVI A;  5JVO A;  3GTG A;  3H3V D;  1ZVU A;  2XCQ A;  4XLP A;  1X31 C;  1TWF A;  4C3J C;  4KB4 A;  1BJT A;  3N0C A;  2YU9 A;  2O5I A;  5JVG S;  4AYB L;  3GTQ K;  4QJV A;  5D4D A;  5EGE A;  1VGX A;  4KB2 A;  2NVY C;  4KN4 A;  2L3U A;  1VLO A;  3S16 C;  1R9T C;  5C3E K;  3S16 K;  1EI6 A;  1R9T K;  4PAB A;  3S1R C;  1SFO C;  3TFI A;  4A3J C;  3ADA C;  3FOE A;  4IOA S;  3GTK C;  3S1M C;  5C4J C;  3K7A K;  5C4J K;  1WCM K;  2E2H K;  3HOX C;  3CQZ C;  4LOW A;  2KPU A;  2P5M A;  2JA5 C;  1I50 C;  3HOU K;  4PAA A;  4A3L C;  4GTC A;  4A3L K;  4A3F C;  2WB1 D;  4WJ3 M;  2JA5 A;  4G7H A;  2GAG C;  1K83 C;  1J6V A;  4ZH4 A;  1B4B A;  5L46 A;  3QX3 A;  3A8I A;  2JA6 A;  4BY7 C;  4OIN A;  4BY7 K;  1I3Q C;  3GTM C;  4BLA A;  3GTM K;  2JA8 K;  3DXJ A;  1ZXO A;  2Y0S L;  3S17 C;  2VUM C;  2ZUF A;  1XXC A;  3S17 K;  2VUM K;  3BP8 C;  2ZUE A;  2NVX A;  3H0G A;  5JVH S;  4KAR A;  3HOW K;  2R92 C;  4XCH A;  1HQM A;  3I4N C;  5IOS A;  2E2I K;  1VH2 A;  1Y1V C;  1DCP A;  1JQW A;  2ZJQ S;  2R7Z C;  2R92 A;  4G0V A;  3RZD C;  2PA8 D;  2R7Z K;  4A3D C;  3PIP S;  2A6E A;  2Y3P A;  5HL7 S;  1O2F B;  3G4C A;  5C44 K;  3RZD K;  3GEE A;  1SMY A;  3AQP A;  1TWH C;  1Y1V A;  2W7V A;  1TWH K;  4G7O A;  4Y7N C;  1EH1 A;  4Y7N K;  3GDZ A;  4LLG A;  1TWA A;  3TTG A;  4MEX A;  3FKI A;  4G7Z A;  2GSU A;  3N0B A;  4O2D A;  1EQR A;  3LPX A;  4A93 C;  3S2D K;  2JA7 C;  2JA7 K;  1BS2 A;  5JFE A;  4GTA A;  1HI9 A;  5IYB C;  4WCE S;  3V4G A;  1C0A A;  1J98 A;  4GTL A;  3HOZ K;  2XCO A;  4LQY A;  3GTP C;  5IP7 K;  4BBR C;  4Q4Z A;  3GTJ C;  1DCH A;  3GTP K;  4Q5S A;  1VJE A;  1VRQ C;  2A69 A;  1YX2 A;  4A3K C;  3GIR A;  1F9N A;  4A3K K;  1DD5 A;  3GTG C;  3LYW A;  3GTG K;  1TWF C;  4YFN A;  1TWC K;  3PO3 C;  2YU9 C;  2BE5 A;  5IYD C;  5IYC C;  5IYD K;  5IYC K;  4C3J K;  4BXX C;  3T01 A;  1KQ4 A;  4X6A C;  2P8T A;  4XLN A;  4A3G C;  2NVY K;  4WFA S;  4IO9 S;  4GTE A;  3A8K A;  4LR2 A;  4YFX A;  3HKZ D;  3PIO S;  2NVQ C;  2NVQ K;  3S1R K;  1SFO K;  4M1X A;  3PO2 C;  5IOQ A;  4A3J K;  5M5Y K;  3PO2 K;  1O26 A;  3GTK K;  3S1M K;  2EBB A;  1WOR A;  3H3V L;  2XCR B;  4FM9 A;  4C45 A;  3HOX K;  3CQZ K;  3HOY C;  1O24 A;  2JA5 K;  1I50 K;  3I4M C;  1RU0 A;  3EQL A;  3FHZ A;  4IOC S;  4LJZ A;  4A3F K;  2V6U A;  4P5A A;  4G0W A;  1XZP A;  3GTQ A;  2CFA A;  3Q3Q A;  1V5V A;  1K83 K;  3AD7 C;  2JA6 C;  3NUH A;  2JA6 K;  1J6X A;  3IPJ A;  1J6W A;  1L0W A;  3OPF A;  1XZP B;  4BBS C;  4YFK A;  4MEY A;  5CJ9 A;  4BBS K;  4Y52 C;  2CFA B;  3SZZ A;  4Y52 K;  1WIH A;  3CF5 S;  4KM9 A;  4J3N A;  3GTO A;  1WCM A;  3LAJ A;  1F7V A;  2E2H A;  1USO A;  2NVX C;  1I3Q K;  3H0G C;  3H0G K;  2GAH C;  2R93 A;  3GTL A;  4GFQ A;  3SZY A;  3TFH A;  2WB1 L;  4OIO A;  3RZO C;  3RZO K;  1I6H C;  1O27 A;  3FOF A;  1I6H K;  4BLB A;  2R92 K;  5IP9 C;  5FLM C;  5M3F K;  3I4N K;  3LAP A;  1BDF A;  1Y1V K;  4AH6 A;  4NOI A;  4A3D K;  3L4K A;  1TWA C;  3FKI C;  1TWA K;  4GZY A;  3FKI K;  5M3M K;  3S2H C;  1YCL A;  4C2M C;  1WOP A;  3ERE D;  2PPB A;  4A3C C;  3BP3 A;  4C2M K;  3S14 C;  3VA7 A;  3BUE A;  4A93 K;  1WQG A;  3WOD A;  4XSX A;  1XPP A;  1YNN A;  1WOS A;  2E2I A;  3S1N C;  3HXA A;  5IYB K;  4WF9 S;  5C4X C;  4A3B C;  4G0U A;  2PA8 L;  4A3B K;  4A3E C;  4C3H C;  5HQH A;  1TWG A;  2WAQ D;  4QIW D;  1XZQ A;  4KC6 A;  4C3H K;  4BBR K;  3GTJ K;  3T02 A;  2E2J C;  5E68 A;  2B63 A;  1I6V A;  2NVT C;  1XZQ B;  2NVT K;  4ILD A;  2CW0 A;  4U67 S;  1WOO A;  1TWF K;  3PO3 K;  2V6S A;  2KQ1 A;  2YU9 K;  1IBA A;  4AYB D;  1UV7 A;  4KAS A;  1O2A A;  3AQO A;  3S15 C;  4LK0 A;  2O5J A;  1IQ0 A;  3S15 K;  4BXX K;  5TMC A;  2ZJR S;  1ZYR A;  4KAT A;  1F93 A;  2KWA A;  4X6A K;  3TFJ A;  2FQO A;  3GEI A;  3MML B;  3HOV C;  4A3G K;  1Y1W A;  3HOV K;  1O29 A;  2A68 A;  3OEP A;  1PJ5 A;  1O28 A;  3CAG A;  1TWC A;  4GTF A;  1XXA A;  4GTB A;  4XSZ A;  1GE9 A;  5CHP A;  3GTQ C;  1PJ7 A;  3HOY K;  4OIR A;  3I4M K;  4JK1 A;  1BGW A;  1WSR A;  1PJ6 A;  4RMF A;  5C3E C;  4YG2 A;  4A3I C;  4A3I K;  2NVY A;  2JH3 A;  3ORE A;  4QJV B;  3K7A C;  1INN A;  3GTO C;  1WCM C;  3GTO K;  3HKZ L;  2E2H C;  1JOE A;  1R9T A;  1SFO A;  3HOU C;  2R93 C;  3GTL C;  2R93 K;  2PHC B;  3GTL K;  2Y0S D;  3GTK A;  4KDD A;  2NVX K;  3CQZ A;  1USM A;  1I50 A;  5EGH A;  3JST A;  3DLL S;  1WQF A;  4WFB S;  1WQH A;  4OIP A;  2FQT A;  4GT9 A;  2ZFZ A;  1K83 A;  2A6H A;  5IP9 K;  5DM7 S;  4BKW A;  3AD8 C;  5FLM K;  4KM8 A;  5M5X K;  1XXB A;  4KAW X;  4WIL A;  4KMU A;  4P5B A;  1AB4 A;  3N3Y A;  1IS1 A;  2JA8 C;  2ZJP S;  3AD9 C;  4KMA A;  4GTD A; 
#chains in the Genus database with same CATH homology
 4QIW D;  4OIQ A;  3M4O C;  4C3H K;  2WB1 D;  3S2H K;  4BBR K;  3GTJ K;  4X6A C;  3M4O K;  4A3C K;  3HOW C;  4XLN A;  4G7H A;  2E2J C;  4A3G C;  2NVY K;  1K83 C;  4LK1 A;  5FJ8 K;  3S14 K;  1I6V A;  2E2I C;  4BY1 C;  3S1Q C;  2NVT C;  4BY1 K;  3S1Q K;  4YFX A;  3HKZ D;  2NVT K;  2CW0 A;  2NVQ C;  4ZH4 A;  2NVQ K;  3S1R K;  1TWF K;  1SFO K;  3PO2 C;  4A3J K;  5C44 C;  5M5Y K;  1IW7 A;  3PO2 K;  3M3Y C;  3GTK K;  3M3Y K;  1TWG C;  4BY7 C;  3S1M K;  3S1N K;  4OIN A;  2PMZ D;  1TWG K;  3PO3 K;  3H3V L;  4BY7 K;  2YU9 K;  1I3Q C;  4AYB D;  3GTM C;  3CQZ K;  5C4X K;  3HOY C;  3HOX K;  3GTM K;  2JA5 K;  3S15 C;  1I50 K;  4LK0 A;  2JA8 K;  3DXJ A;  3I4M C;  2O5J A;  4A3E K;  5TMC A;  3EQL A;  2B63 C;  2Y0S L;  3S15 K;  4BXX K;  3S17 C;  2VUM C;  4LJZ A;  4A3F K;  1ZYR A;  2B63 K;  3S17 K;  2VUM K;  4X6A K;  3S2D C;  3HOW K;  2R92 C;  4C3I C;  3HOV C;  2E2J K;  1HQM A;  4C3I K;  3HOV K;  4A3G K;  2A68 A;  1K83 K;  2JA6 C;  3I4N C;  2E2I K;  2JA6 K;  5TMF A;  1Y1V C;  1YNJ A;  4MQ9 A;  4BBS C;  4YFK A;  4MEY A;  2R7Z C;  4BBS K;  4Y52 C;  2PA8 D;  3RZD C;  4A3D C;  2R7Z K;  2A6E A;  3RZD K;  4Y52 K;  5C44 K;  3HOZ C;  1SMY A;  1TWH C;  5IP7 C;  1TWH K;  4A3M C;  4XSZ A;  4G7O A;  2NVX C;  2PMZ L;  1I3Q K;  4A3M K;  3H0G C;  4Y7N C;  3GTQ C;  5M5W K;  3HOY K;  3H0G K;  4Y7N K;  4LLG A;  4OIR A;  1Y1W C;  3I4M K;  4JK1 A;  4MEX A;  1Y1W K;  2WAQ L;  4QIW L;  4G7Z A;  2WB1 L;  4OIO A;  3RZO C;  4A93 C;  5C3E C;  3RZO K;  1I6H C;  3S2D K;  4KN7 A;  4YG2 A;  1I6H K;  4A3I C;  2R92 K;  2JA7 C;  4A3I K;  4QJV B;  1TWC C;  5FLM C;  5IP9 C;  2JA7 K;  3K7A C;  5M3F K;  3I4N K;  3GTO C;  1WCM C;  3GTO K;  1BDF A;  5IYB C;  2E2H C;  3H3V D;  1Y1V K;  3HKZ L;  4XLP A;  4NOI A;  3HOU C;  4C3J C;  2R93 C;  4A3D K;  3GTL C;  2R93 K;  1TWA C;  2Y0S D;  3GTL K;  3HOZ K;  3FKI C;  1TWA K;  3GTP C;  4GZY A;  3FKI K;  5IP7 K;  5M3M K;  3S2H C;  4BBR C;  4Q4Z A;  3GTJ C;  3GTP K;  2O5I A;  4C2M C;  2NVX K;  4AYB L;  2PPB A;  4A3C C;  4C2M K;  4Q5S A;  3GTQ K;  4QJV A;  5D4D A;  2A69 A;  2NVY C;  3S14 C;  4KN4 A;  4A3K C;  4A3K K;  3GTG C;  3S16 C;  4OIP A;  4A93 K;  1R9T C;  3GTG K;  5C3E K;  3S16 K;  1R9T K;  3S1R C;  1TWF C;  4YFN A;  1SFO C;  3WOD A;  4A3J C;  4XSX A;  1XPP A;  1YNN A;  2A6H A;  1TWC K;  5IP9 K;  5FLM K;  3GTK C;  3S1M C;  5C4J C;  3PO3 C;  3K7A K;  3S1N C;  5M5X K;  5C4J K;  1WCM K;  2YU9 C;  4KMU A;  5IYB K;  2E2H K;  2BE5 A;  5IYD C;  3HOX C;  3CQZ C;  5C4X C;  5IYC C;  4A3B C;  2JA5 C;  5IYD K;  1I50 C;  2PA8 L;  2JA8 C;  5IYC K;  4C3J K;  3HOU K;  4BXX C;  4A3E C;  4A3L C;  4A3B K;  4A3L K;  4C3H C;  4A3F C;  2WAQ D; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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