1R9TC

Rna polymerase ii strand separated elongation complex, mismatched nucleotide
Total Genus 42
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
266
structure length
266
Chain Sequence
b'EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords RNA strand
publication title Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center.
pubmed doi rcsb
molecule tags Transcription/dna-rna hybrid
total genus 42
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2003-10-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 1r9tC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 1r9tC01
2PA8L 4QIWL 3S1RK 3S2HK 1TWFC 4C3HC 4A3KK 4YFXA 1I6VA 5C4XC 3GTLK 4XLPA 4A93C 2JA5C 2NVXC 3S1QK 2PPBA 3EQLA 4A3DC 2CW0A 4BY7K 3S17K 3GTQK 1I6HK 2O5IA 2VUMK 3M4OC 2JA7C 3S1NK 4X6AK 3FKIK 4A3BK 4OIRA 1SMYA 3RZDC 2E2JC 2E2HC 2NVYK 2R93C 3HOUK 4A3EK 4YFNA 5IYBK 2WB1L 1SFOK 1XPPA 4A3JK 4A3FC 4C2MK 2B63K 4XLNA 2JA8K 4QJVA 4A3CK 4Y52K 5C3EC 3GTOC 2PA8D 4QIWD 5TMCA 1BDFA 1R9TC 4Q4ZA 4XSXA 1IW7A 3H0GC 5C44C 4AYBL 3I4MK 3S1MK 4BXXK 4A3MC 3I4NK 4KN7A 4YFKA 2NVTC 1I3QC 1Y1WC 5IP9C 3H3VL 3DXJA 1TWFK 4G7HA 4C3HK 2YU9K 1TWAC 4OIPA 1TWGC 3HOXC 4YG2A 3S16C 5C4XK 2JA5K 2NVXK 3PO3K 4A93K 2WB1D 3PO2C 4MEYA 4BY1K 1HQMA 3GTMK 1I50C 2E2IC 1YNNA 5IP7C 4OINA 3S14C 4A3LC 5TMFA 4NOIA 2JA7K 3RZDK 4AYBD 1ZYRA 2E2JK 2E2HK 2R93K 3HKZL 4BBRK 3M3YC 5C3EK 2JA6C 5FLMC 2NVQC 3H3VD 4BBSC 1R9TK 2R7ZC 5C44K 3H0GK 5IYDK 4JK1A 3K7AK 4A3MK 4G7OA 3GTGC 5M3MK 2NVTK 1WCMK 1I3QK 5D4DA 4A3GC 4OIOA 2R92C 1K83C 4ZH4A 3S15C 1TWHK 5IP9K 1Y1WK 1TWAK 1TWGK 3HOXK 3S16K 3HOVC 3HKZD 5M5WK 3GTJC 4A3DK 1I50K 3S14K 4A3LK 3GTKC 5IYCC 3S17C 1I6HC 4QJVB 1Y1VC 4LK1A 1TWCC 2NVYC 3HOUC 3S2DC 2A6HA 5C4JC 2O5JA 5FLMK 2JA6K 4A3FK 3CQZC 2NVQK 4BBSK 4C2MC 2R7ZK 4C3IC 2JA8C 4A3CC 4XSZA 2Y0SL 4Y7NC 3GTOK 4Q5SA 3GTPC 3WODA 4C3JC 3RZOC 3GTGK 2A6EA 1YNJA 4LK0A 3HOZC 1K83K 5M5YK 2R92K 3S15K 4A3GK 5M5XK 4OIQA 4MQ9A 3HOVK 4GZYA 3HOWC 2PMZL 2YU9C 3HOYC 4A3IC 3PO3C 3GTJK 2A68A 4LLGA 3S1RC 3S2HC 4A3KC 3GTKK 5IYCK 3PO2K 3GTLC 3M4OK 3S1QC 4LJZA 2WAQL 4BY1C 4KMUA 2Y0SD 3GTMC 4Y52C 1Y1VK 5IP7K 2E2IK 4BY7C 3GTQC 2VUMC 4X6AC 1TWCK 3S1NC 5M3FK 3S2DK 3FKIC 5C4JK 3M3YK 4BBRC 4A3BC 3CQZK 4C3IK 2A69A 4A3EC 5IYBC 1SFOC 4Y7NK 4A3JC 3GTPK 4MEXA 2PMZD 2B63C 4C3JK 3RZOK 5FJ8K 4G7ZA 5IYDC 3HOZK 2BE5A 3K7AC 2WAQD 3I4MC 3S1MC 1WCMC 4BXXC 4KN4A 1TWHC 3I4NC 3HOWK 3HOYK 4A3IK
chains in the Genus database with same CATH superfamily
2PA8L 4KB4A 4C45A 3S1RK 4A3KK 1C0AA 1USMA 1DCHA 1I6VA 4XLPA 2JA5C 2NVXC 4A3DC 2VUMK 3PIPS 5TJ3A 3T00A 4OIRA 3HOUK 1SFOK 1J6VA 4A3FC 4XLNA 3AQPA 2PA8D 5TMCA 1BDFA 4KB2A 4AYBL 1IW7A 4G0VA 3S1MK 4A3MC 3I4NK 4KN7A 2NVTC 4GT9A 1I3QC 4GTFA 4OIPA 3HOXC 1WCMA 1TWHA 4PABA 3PO2C 4LOWA 3M4OK 4A3LC 1O2FB 4NOIA 3RZDK 4AYBD 1ZYRA 2NVXA 1WSRA 3PIOS 3M3YC 3ERED 5C3EK 4BBSC 4PAAA 2ZJPS 1JOEA 4RMFA 3H0GK 4JK1A 4P5BA 3K7AK 1WCMK 5D4DA 1V5VA 1B4BA 2R92C 1K83C 3S15C 1TWHK 2KXYA 3GTGA 1TWGK 3S16K 1JQWA 2XCQA 4BLBA 1I3QA 5M5WK 4GFQA 4GTEA 4A3DK 3S14K 2ZJQS 5IYCC 4QJVB 4GTAA 2CFAB 4KM9A 4LK1A 2O5JA 4DDQA 2A6HA 5C4JC 4IOCS 1F93A 4A3FK 4C2MC 1ZVUA 1TWCA 3L4JA 1O26A 3GTGK 2A6EA 4A3GK 4LK0A 3GEEA 4KM8A 1PJ6A 3A8JA 3GTJK 2A68A 3S1RC 2R92A 4A3KC 3PO2K 3OREA 5HL8A 1O2AA 2WAQL 4LJZA 1O27A 4KMUA 3G4AA 4WCES 2VUMC 1TWCK 3DLLS 3M3YK 3ADAC 1IE0A 4C3IK 1SFOC 3V4GA 3A8KA 4MEXA 1KQ4A 3RZOK 5JFEA 1BJTA 3MMLB 2WAQD 3S1MC 2Y3PA 3I4NC 4GTDA 5EGHA 3S2HK 4WJ4A 4YFXA 3GTLK 2CW0A 3GTQK 4KMHA 3M4OC 4X6AK 3S1NK 1ZQ1C 1XXCA 3FKIK 1BS2A 3RZDC 4A3EK 4YFNA 2WB1L 4A3JK 2D6FC 4C2MK 2VUMA 5C3EC 3H0GC 1SFOA 4WILA 2L5NA 4KARA 3DXJA 1TWFK 4G7HA 4C3HK 5C4XK 1TWGC 4YG2A 3S16C 2WB1D 1WQFA 1HQMA 3GEIA 3S14C 2JA7K 3JSTA 3FOEA 3S0XA 2E2JK 2E2HK 3HKZL 1FEUA 1EFWA 3TFHA 1R9TK 1DCOA 4G7OA 3GTGC 1YCLA 4A3GC 4OIOA 1Y1WK 1F9NA 4KATA 5IP9K 3H0GA 3AD9C 1J6XA 1J98A 3HKZD 1WIHA 3GTJC 1I50K 1DCPA 3TFIA 1TWGA 3S17C 1I6HC 1WOSA 4KASA 3LPXA 3N0BA 5IOQA 1TWCC 1BGWA 2JA6K 5FLMK 5JVHS 3LYWA 4C3IC 2JA8C 4XSZA 1HI9A 3RZOC 1YNJA 4GTLA 1WOPA 3HOVK 4J3NA 2PMZL 1PJ7A 3S2HC 4IOAS 3GTKK 3GTLC 1EK8A 4GTBA 3GTMC 3GTQC 3GTJA 4X6AC 1VLOA 3S1NC 5IORA 3FKIC 3GIRA 3CQZK 1DD5A 3GDZA 2A69A 4A3EC 1XXAA 3SZZA 5IOSA 1GE9A 4A3JC 3GTPK 2PMZD 1VRQC 4C3JK 5FJ8K 4GTCA 4G0WA 3HOZK 2BE5A 4FZBA 4KN4A 3AQOA 4KAWX 4A3IK 3A8IA 4QIWL 1TWFC 4C3HC 3N3YA 5C4XC 1XXBA 4P5AA 2PPBA 3EQLA 2GAGC 3S17K 1I6HK 2JA7C 1IBAA 3GTLA 2E2JC 2E2HC 3GTMA 3L4KA 3GTQA 2B63K 2JA8K 1USOA 3BP3A 3FKIA 4QIWD 2KQ1A 1R9TC 4Q4ZA 4XSXA 3I4MK 1L0WA 5IOTA 1Y1WC 5IP9C 3H3VL 3OPFA 5L46A 4A93K 2GSNA 4IO9S 3AD8C 2EBBA 3LAJA 3GTMK 1I50C 4WF9S 1TWFA 1B4AA 5CJ9A 5JVOA 2R93K 1F7VA 4KMDA 3BP8C 1O28A 4WFNS 2JA7A 2JA6C 5FLMC 3H3VD 2E2HA 5C44K 2FQTA 1XZPA 2R7ZA 1WQHA 1R9TA 1EH1A 1TWAK 1XZQA 1VGXA 3HOVC 1YX2A 2RH6A 1O24A 2ZUFA 1Y1WA 2XCRB 3GTKC 4M1XA 5E68A 1XZPB 1I50A 2NVYC 2NVQK 3CQZC 2R7ZK 4A3CC 4G0UA 2KPUA 3GTPC 3WODA 4C3JC 1INNA 2GSUA 2JA6A 3HOZC 2GAHC 5M5XK 5HL7S 1IQ0A 1G51A 2JH3A 3QX3A 2YU9C 4A3IC 3PO3C 4LLGA 1UV7A 4BY1C 3G4CA 3BUEA 4Y52C 1Y1VK 3OEPA 4U67S 2PHCB 3S2DK 3GTKA 4KC6A 4BBRC 4P9SA 4Y7NK 2B63C 5DM7S 4LQYA 2NVYA 5IYDC 4FM9A 3CQZA 3I4MC 1IS1A 3T02A 3GTPA 2W7VA 1O2BA 2KWAA 3HOWK 3HOYK 3AD7C 3LAPA 3S1QK 4A93C 1PJ5A 3TTGA 2YU9A 1O25A 4BY7K 3VA7A 2O5IA 2JA5A 4XCHA 1EI6A 4A3BK 1SMYA 3Q3QA 4KDDA 2NVYK 4ILDA 2R93C 5IYBK 2XCOA 1XPPA 4A3CK 1EQRA 4QJVA 3GTOC 1ZBSA 2CFAA 5C44C 1ISEA 4BXXK 1O29A 1WQGA 3FOFA 4YFKA 2B63A 4WFBS 1J6WA 3FHZA 2YU9K 1F7UA 1TWAC 1WORA 3PO3K 1VH2A 4O2DA 2JA5K 2NVXK 3TFJA 4MEYA 2P5MA 5DM6S 4BY1K 2E2IC 1ZXOA 1YNNA 5IP7C 4OINA 2ZJRS 2ZFZA 5TMFA 4Y52K 3IPJA 4BBRK 3N0CA 3T01A 4KMAA 3AH5A 3CAGA 2NVQC 2GSOA 2R7ZC 2R93A 5IYDK 3GSIA 2V6SA 4A3MK 5M3MK 4LR2A 2NVTK 2L3UA 1I3QK 3GTOA 4ZH4A 2ZUEA 1WSVA 3HOXK 1K83A 2RGRA 5EGEA 4A3LK 1TWAA 3CF5S 4BLAA 1Y1VC 4WJ3M 2E2IA 3HOUC 3S2DC 4BBSK 4AH6A 3GTOK 2Y0SL 4Y7NC 4Q5SA 2V6TA 5M5YK 2R92K 1K83K 5CHPA 2V6UA 3S15K 4OIQA 4MQ9A 4GZYA 3HOWC 3HOYC 4BKWA 5IYCK 2FQOA 1X31C 3S1QC 2E2IK 2Y0SD 1AB4A 5IP7K 2P8TA 1IL2A 4BY7C 3HXAA 5M3FK 4WFAS 5HQHA 5C4JK 4A3BC 3SZYA 1Y1VA 1JVIA 5IYBC 1RU0A 3NUHA 1XZQB 4G7ZA 1WOOA 3K7AC 5JVGS 4BXXC 3GEHA 1WCMC 1VJEA 1TWHC
chains in the Genus database with same CATH topology
2PA8L 4QIWL 3S1RK 3S2HK 1TWFC 4C3HC 4A3KK 4YFXA 1I6VA 5C4XC 3GTLK 4XLPA 4A93C 2JA5C 2NVXC 3S1QK 2PPBA 3EQLA 4A3DC 2CW0A 4BY7K 3S17K 3GTQK 1I6HK 2O5IA 2VUMK 3M4OC 2JA7C 3S1NK 4X6AK 3FKIK 4A3BK 4OIRA 1SMYA 3RZDC 2E2JC 2E2HC 2NVYK 2R93C 3HOUK 4A3EK 4YFNA 5IYBK 2WB1L 1SFOK 1XPPA 4A3JK 4A3FC 4C2MK 2B63K 4XLNA 2JA8K 4QJVA 4A3CK 4Y52K 5C3EC 3GTOC 2PA8D 4QIWD 5TMCA 1BDFA 1R9TC 4Q4ZA 4XSXA 1IW7A 3H0GC 5C44C 4AYBL 3I4MK 3S1MK 4BXXK 4A3MC 3I4NK 4KN7A 4YFKA 2NVTC 1I3QC 1Y1WC 5IP9C 3H3VL 3DXJA 1TWFK 4G7HA 4C3HK 2YU9K 1TWAC 4OIPA 1TWGC 3HOXC 4YG2A 3S16C 5C4XK 2JA5K 2NVXK 3PO3K 4A93K 2WB1D 3PO2C 4MEYA 4BY1K 1HQMA 3GTMK 1I50C 2E2IC 1YNNA 5IP7C 4OINA 3S14C 4A3LC 5TMFA 4NOIA 2JA7K 3RZDK 4AYBD 1ZYRA 2E2JK 2E2HK 2R93K 3HKZL 4BBRK 3M3YC 5C3EK 2JA6C 5FLMC 2NVQC 3H3VD 4BBSC 1R9TK 2R7ZC 5C44K 3H0GK 5IYDK 4JK1A 3K7AK 4A3MK 4G7OA 3GTGC 5M3MK 2NVTK 1WCMK 1I3QK 5D4DA 4A3GC 4OIOA 2R92C 1K83C 4ZH4A 3S15C 1TWHK 5IP9K 1Y1WK 1TWAK 1TWGK 3HOXK 3S16K 3HOVC 3HKZD 5M5WK 3GTJC 4A3DK 1I50K 3S14K 4A3LK 3GTKC 5IYCC 3S17C 1I6HC 4QJVB 1Y1VC 4LK1A 1TWCC 2NVYC 3HOUC 3S2DC 2A6HA 5C4JC 2O5JA 5FLMK 2JA6K 4A3FK 3CQZC 2NVQK 4BBSK 4C2MC 2R7ZK 4C3IC 2JA8C 4A3CC 4XSZA 2Y0SL 4Y7NC 3GTOK 4Q5SA 3GTPC 3WODA 4C3JC 3RZOC 3GTGK 2A6EA 1YNJA 4LK0A 3HOZC 1K83K 5M5YK 2R92K 3S15K 4A3GK 5M5XK 4OIQA 4MQ9A 3HOVK 4GZYA 3HOWC 2PMZL 2YU9C 3HOYC 4A3IC 3PO3C 3GTJK 2A68A 4LLGA 3S1RC 3S2HC 4A3KC 3GTKK 5IYCK 3PO2K 3GTLC 3M4OK 3S1QC 4LJZA 2WAQL 4BY1C 4KMUA 2Y0SD 3GTMC 4Y52C 1Y1VK 5IP7K 2E2IK 4BY7C 3GTQC 2VUMC 4X6AC 1TWCK 3S1NC 5M3FK 3S2DK 3FKIC 5C4JK 3M3YK 4BBRC 4A3BC 3CQZK 4C3IK 2A69A 4A3EC 5IYBC 1SFOC 4Y7NK 4A3JC 3GTPK 4MEXA 2PMZD 2B63C 4C3JK 3RZOK 5FJ8K 4G7ZA 5IYDC 3HOZK 2BE5A 3K7AC 2WAQD 3I4MC 3S1MC 1WCMC 4BXXC 4KN4A 1TWHC 3I4NC 3HOWK 3HOYK 4A3IK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2PA8 L;  4QIW L;  3S1R K;  3S2H K;  1TWF C;  4C3H C;  4A3K K;  4YFX A;  1I6V A;  5C4X C;  3GTL K;  4XLP A;  4A93 C;  2JA5 C;  2NVX C;  3S1Q K;  2PPB A;  3EQL A;  4A3D C;  2CW0 A;  4BY7 K;  3S17 K;  3GTQ K;  1I6H K;  2O5I A;  2VUM K;  3M4O C;  2JA7 C;  3S1N K;  4X6A K;  3FKI K;  4A3B K;  4OIR A;  1SMY A;  3RZD C;  2E2J C;  2E2H C;  2NVY K;  2R93 C;  3HOU K;  4A3E K;  4YFN A;  5IYB K;  2WB1 L;  1SFO K;  1XPP A;  4A3J K;  4A3F C;  4C2M K;  2B63 K;  4XLN A;  2JA8 K;  4QJV A;  4A3C K;  4Y52 K;  5C3E C;  3GTO C;  2PA8 D;  4QIW D;  5TMC A;  1BDF A;  1R9T C;  4Q4Z A;  4XSX A;  1IW7 A;  3H0G C;  5C44 C;  4AYB L;  3I4M K;  3S1M K;  4BXX K;  4A3M C;  3I4N K;  4KN7 A;  4YFK A;  2NVT C;  1I3Q C;  1Y1W C;  5IP9 C;  3H3V L;  3DXJ A;  1TWF K;  4G7H A;  4C3H K;  2YU9 K;  1TWA C;  4OIP A;  1TWG C;  3HOX C;  4YG2 A;  3S16 C;  5C4X K;  2JA5 K;  2NVX K;  3PO3 K;  4A93 K;  2WB1 D;  3PO2 C;  4MEY A;  4BY1 K;  1HQM A;  3GTM K;  1I50 C;  2E2I C;  1YNN A;  5IP7 C;  4OIN A;  3S14 C;  4A3L C;  5TMF A;  4NOI A;  2JA7 K;  3RZD K;  4AYB D;  1ZYR A;  2E2J K;  2E2H K;  2R93 K;  3HKZ L;  4BBR K;  3M3Y C;  5C3E K;  2JA6 C;  5FLM C;  2NVQ C;  3H3V D;  4BBS C;  1R9T K;  2R7Z C;  5C44 K;  3H0G K;  5IYD K;  4JK1 A;  3K7A K;  4A3M K;  4G7O A;  3GTG C;  5M3M K;  2NVT K;  1WCM K;  1I3Q K;  5D4D A;  4A3G C;  4OIO A;  2R92 C;  1K83 C;  4ZH4 A;  3S15 C;  1TWH K;  5IP9 K;  1Y1W K;  1TWA K;  1TWG K;  3HOX K;  3S16 K;  3HOV C;  3HKZ D;  5M5W K;  3GTJ C;  4A3D K;  1I50 K;  3S14 K;  4A3L K;  3GTK C;  5IYC C;  3S17 C;  1I6H C;  4QJV B;  1Y1V C;  4LK1 A;  1TWC C;  2NVY C;  3HOU C;  3S2D C;  2A6H A;  5C4J C;  2O5J A;  5FLM K;  2JA6 K;  4A3F K;  3CQZ C;  2NVQ K;  4BBS K;  4C2M C;  2R7Z K;  4C3I C;  2JA8 C;  4A3C C;  4XSZ A;  2Y0S L;  4Y7N C;  3GTO K;  4Q5S A;  3GTP C;  3WOD A;  4C3J C;  3RZO C;  3GTG K;  2A6E A;  1YNJ A;  4LK0 A;  3HOZ C;  1K83 K;  5M5Y K;  2R92 K;  3S15 K;  4A3G K;  5M5X K;  4OIQ A;  4MQ9 A;  3HOV K;  4GZY A;  3HOW C;  2PMZ L;  2YU9 C;  3HOY C;  4A3I C;  3PO3 C;  3GTJ K;  2A68 A;  4LLG A;  3S1R C;  3S2H C;  4A3K C;  3GTK K;  5IYC K;  3PO2 K;  3GTL C;  3M4O K;  3S1Q C;  4LJZ A;  2WAQ L;  4BY1 C;  4KMU A;  2Y0S D;  3GTM C;  4Y52 C;  1Y1V K;  5IP7 K;  2E2I K;  4BY7 C;  3GTQ C;  2VUM C;  4X6A C;  1TWC K;  3S1N C;  5M3F K;  3S2D K;  3FKI C;  5C4J K;  3M3Y K;  4BBR C;  4A3B C;  3CQZ K;  4C3I K;  2A69 A;  4A3E C;  5IYB C;  1SFO C;  4Y7N K;  4A3J C;  3GTP K;  4MEX A;  2PMZ D;  2B63 C;  4C3J K;  3RZO K;  5FJ8 K;  4G7Z A;  5IYD C;  3HOZ K;  2BE5 A;  3K7A C;  2WAQ D;  3I4M C;  3S1M C;  1WCM C;  4BXX C;  4KN4 A;  1TWH C;  3I4N C;  3HOW K;  3HOY K;  4A3I K; 
#chains in the Genus database with same CATH topology
 2PA8 L;  4KB4 A;  4C45 A;  3S1R K;  4A3K K;  1C0A A;  1USM A;  1DCH A;  1I6V A;  4XLP A;  2JA5 C;  2NVX C;  4A3D C;  2VUM K;  3PIP S;  5TJ3 A;  3T00 A;  4OIR A;  3HOU K;  1SFO K;  1J6V A;  4A3F C;  4XLN A;  3AQP A;  2PA8 D;  5TMC A;  1BDF A;  4KB2 A;  4AYB L;  1IW7 A;  4G0V A;  3S1M K;  4A3M C;  3I4N K;  4KN7 A;  2NVT C;  4GT9 A;  1I3Q C;  4GTF A;  4OIP A;  3HOX C;  1WCM A;  1TWH A;  4PAB A;  3PO2 C;  4LOW A;  3M4O K;  4A3L C;  1O2F B;  4NOI A;  3RZD K;  4AYB D;  1ZYR A;  2NVX A;  1WSR A;  3PIO S;  3M3Y C;  3ERE D;  5C3E K;  4BBS C;  4PAA A;  2ZJP S;  1JOE A;  4RMF A;  3H0G K;  4JK1 A;  4P5B A;  3K7A K;  1WCM K;  5D4D A;  1V5V A;  1B4B A;  2R92 C;  1K83 C;  3S15 C;  1TWH K;  2KXY A;  3GTG A;  1TWG K;  3S16 K;  1JQW A;  2XCQ A;  4BLB A;  1I3Q A;  5M5W K;  4GFQ A;  4GTE A;  4A3D K;  3S14 K;  2ZJQ S;  5IYC C;  4QJV B;  4GTA A;  2CFA B;  4KM9 A;  4LK1 A;  2O5J A;  4DDQ A;  2A6H A;  5C4J C;  4IOC S;  1F93 A;  4A3F K;  4C2M C;  1ZVU A;  1TWC A;  3L4J A;  1O26 A;  3GTG K;  2A6E A;  4A3G K;  4LK0 A;  3GEE A;  4KM8 A;  1PJ6 A;  3A8J A;  3GTJ K;  2A68 A;  3S1R C;  2R92 A;  4A3K C;  3PO2 K;  3ORE A;  5HL8 A;  1O2A A;  2WAQ L;  4LJZ A;  1O27 A;  4KMU A;  3G4A A;  4WCE S;  2VUM C;  1TWC K;  3DLL S;  3M3Y K;  3ADA C;  1IE0 A;  4C3I K;  1SFO C;  3V4G A;  3A8K A;  4MEX A;  1KQ4 A;  3RZO K;  5JFE A;  1BJT A;  3MML B;  2WAQ D;  3S1M C;  2Y3P A;  3I4N C;  4GTD A;  5EGH A;  3S2H K;  4WJ4 A;  4YFX A;  3GTL K;  2CW0 A;  3GTQ K;  4KMH A;  3M4O C;  4X6A K;  3S1N K;  1ZQ1 C;  1XXC A;  3FKI K;  1BS2 A;  3RZD C;  4A3E K;  4YFN A;  2WB1 L;  4A3J K;  2D6F C;  4C2M K;  2VUM A;  5C3E C;  3H0G C;  1SFO A;  4WIL A;  2L5N A;  4KAR A;  3DXJ A;  1TWF K;  4G7H A;  4C3H K;  5C4X K;  1TWG C;  4YG2 A;  3S16 C;  2WB1 D;  1WQF A;  1HQM A;  3GEI A;  3S14 C;  2JA7 K;  3JST A;  3FOE A;  3S0X A;  2E2J K;  2E2H K;  3HKZ L;  1FEU A;  1EFW A;  3TFH A;  1R9T K;  1DCO A;  4G7O A;  3GTG C;  1YCL A;  4A3G C;  4OIO A;  1Y1W K;  1F9N A;  4KAT A;  5IP9 K;  3H0G A;  3AD9 C;  1J6X A;  1J98 A;  3HKZ D;  1WIH A;  3GTJ C;  1I50 K;  1DCP A;  3TFI A;  1TWG A;  3S17 C;  1I6H C;  1WOS A;  4KAS A;  3LPX A;  3N0B A;  5IOQ A;  1TWC C;  1BGW A;  2JA6 K;  5FLM K;  5JVH S;  3LYW A;  4C3I C;  2JA8 C;  4XSZ A;  1HI9 A;  3RZO C;  1YNJ A;  4GTL A;  1WOP A;  3HOV K;  4J3N A;  2PMZ L;  1PJ7 A;  3S2H C;  4IOA S;  3GTK K;  3GTL C;  1EK8 A;  4GTB A;  3GTM C;  3GTQ C;  3GTJ A;  4X6A C;  1VLO A;  3S1N C;  5IOR A;  3FKI C;  3GIR A;  3CQZ K;  1DD5 A;  3GDZ A;  2A69 A;  4A3E C;  1XXA A;  3SZZ A;  5IOS A;  1GE9 A;  4A3J C;  3GTP K;  2PMZ D;  1VRQ C;  4C3J K;  5FJ8 K;  4GTC A;  4G0W A;  3HOZ K;  2BE5 A;  4FZB A;  4KN4 A;  3AQO A;  4KAW X;  4A3I K;  3A8I A;  4QIW L;  1TWF C;  4C3H C;  3N3Y A;  5C4X C;  1XXB A;  4P5A A;  2PPB A;  3EQL A;  2GAG C;  3S17 K;  1I6H K;  2JA7 C;  1IBA A;  3GTL A;  2E2J C;  2E2H C;  3GTM A;  3L4K A;  3GTQ A;  2B63 K;  2JA8 K;  1USO A;  3BP3 A;  3FKI A;  4QIW D;  2KQ1 A;  1R9T C;  4Q4Z A;  4XSX A;  3I4M K;  1L0W A;  5IOT A;  1Y1W C;  5IP9 C;  3H3V L;  3OPF A;  5L46 A;  4A93 K;  2GSN A;  4IO9 S;  3AD8 C;  2EBB A;  3LAJ A;  3GTM K;  1I50 C;  4WF9 S;  1TWF A;  1B4A A;  5CJ9 A;  5JVO A;  2R93 K;  1F7V A;  4KMD A;  3BP8 C;  1O28 A;  4WFN S;  2JA7 A;  2JA6 C;  5FLM C;  3H3V D;  2E2H A;  5C44 K;  2FQT A;  1XZP A;  2R7Z A;  1WQH A;  1R9T A;  1EH1 A;  1TWA K;  1XZQ A;  1VGX A;  3HOV C;  1YX2 A;  2RH6 A;  1O24 A;  2ZUF A;  1Y1W A;  2XCR B;  3GTK C;  4M1X A;  5E68 A;  1XZP B;  1I50 A;  2NVY C;  2NVQ K;  3CQZ C;  2R7Z K;  4A3C C;  4G0U A;  2KPU A;  3GTP C;  3WOD A;  4C3J C;  1INN A;  2GSU A;  2JA6 A;  3HOZ C;  2GAH C;  5M5X K;  5HL7 S;  1IQ0 A;  1G51 A;  2JH3 A;  3QX3 A;  2YU9 C;  4A3I C;  3PO3 C;  4LLG A;  1UV7 A;  4BY1 C;  3G4C A;  3BUE A;  4Y52 C;  1Y1V K;  3OEP A;  4U67 S;  2PHC B;  3S2D K;  3GTK A;  4KC6 A;  4BBR C;  4P9S A;  4Y7N K;  2B63 C;  5DM7 S;  4LQY A;  2NVY A;  5IYD C;  4FM9 A;  3CQZ A;  3I4M C;  1IS1 A;  3T02 A;  3GTP A;  2W7V A;  1O2B A;  2KWA A;  3HOW K;  3HOY K;  3AD7 C;  3LAP A;  3S1Q K;  4A93 C;  1PJ5 A;  3TTG A;  2YU9 A;  1O25 A;  4BY7 K;  3VA7 A;  2O5I A;  2JA5 A;  4XCH A;  1EI6 A;  4A3B K;  1SMY A;  3Q3Q A;  4KDD A;  2NVY K;  4ILD A;  2R93 C;  5IYB K;  2XCO A;  1XPP A;  4A3C K;  1EQR A;  4QJV A;  3GTO C;  1ZBS A;  2CFA A;  5C44 C;  1ISE A;  4BXX K;  1O29 A;  1WQG A;  3FOF A;  4YFK A;  2B63 A;  4WFB S;  1J6W A;  3FHZ A;  2YU9 K;  1F7U A;  1TWA C;  1WOR A;  3PO3 K;  1VH2 A;  4O2D A;  2JA5 K;  2NVX K;  3TFJ A;  4MEY A;  2P5M A;  5DM6 S;  4BY1 K;  2E2I C;  1ZXO A;  1YNN A;  5IP7 C;  4OIN A;  2ZJR S;  2ZFZ A;  5TMF A;  4Y52 K;  3IPJ A;  4BBR K;  3N0C A;  3T01 A;  4KMA A;  3AH5 A;  3CAG A;  2NVQ C;  2GSO A;  2R7Z C;  2R93 A;  5IYD K;  3GSI A;  2V6S A;  4A3M K;  5M3M K;  4LR2 A;  2NVT K;  2L3U A;  1I3Q K;  3GTO A;  4ZH4 A;  2ZUE A;  1WSV A;  3HOX K;  1K83 A;  2RGR A;  5EGE A;  4A3L K;  1TWA A;  3CF5 S;  4BLA A;  1Y1V C;  4WJ3 M;  2E2I A;  3HOU C;  3S2D C;  4BBS K;  4AH6 A;  3GTO K;  2Y0S L;  4Y7N C;  4Q5S A;  2V6T A;  5M5Y K;  2R92 K;  1K83 K;  5CHP A;  2V6U A;  3S15 K;  4OIQ A;  4MQ9 A;  4GZY A;  3HOW C;  3HOY C;  4BKW A;  5IYC K;  2FQO A;  1X31 C;  3S1Q C;  2E2I K;  2Y0S D;  1AB4 A;  5IP7 K;  2P8T A;  1IL2 A;  4BY7 C;  3HXA A;  5M3F K;  4WFA S;  5HQH A;  5C4J K;  4A3B C;  3SZY A;  1Y1V A;  1JVI A;  5IYB C;  1RU0 A;  3NUH A;  1XZQ B;  4G7Z A;  1WOO A;  3K7A C;  5JVG S;  4BXX C;  3GEH A;  1WCM C;  1VJE A;  1TWH C; 
#chains in the Genus database with same CATH homology
 2PA8 L;  4QIW L;  3S1R K;  3S2H K;  1TWF C;  4C3H C;  4A3K K;  4YFX A;  1I6V A;  5C4X C;  3GTL K;  4XLP A;  4A93 C;  2JA5 C;  2NVX C;  3S1Q K;  2PPB A;  3EQL A;  4A3D C;  2CW0 A;  4BY7 K;  3S17 K;  3GTQ K;  1I6H K;  2O5I A;  2VUM K;  3M4O C;  2JA7 C;  3S1N K;  4X6A K;  3FKI K;  4A3B K;  4OIR A;  1SMY A;  3RZD C;  2E2J C;  2E2H C;  2NVY K;  2R93 C;  3HOU K;  4A3E K;  4YFN A;  5IYB K;  2WB1 L;  1SFO K;  1XPP A;  4A3J K;  4A3F C;  4C2M K;  2B63 K;  4XLN A;  2JA8 K;  4QJV A;  4A3C K;  4Y52 K;  5C3E C;  3GTO C;  2PA8 D;  4QIW D;  5TMC A;  1BDF A;  1R9T C;  4Q4Z A;  4XSX A;  1IW7 A;  3H0G C;  5C44 C;  4AYB L;  3I4M K;  3S1M K;  4BXX K;  4A3M C;  3I4N K;  4KN7 A;  4YFK A;  2NVT C;  1I3Q C;  1Y1W C;  5IP9 C;  3H3V L;  3DXJ A;  1TWF K;  4G7H A;  4C3H K;  2YU9 K;  1TWA C;  4OIP A;  1TWG C;  3HOX C;  4YG2 A;  3S16 C;  5C4X K;  2JA5 K;  2NVX K;  3PO3 K;  4A93 K;  2WB1 D;  3PO2 C;  4MEY A;  4BY1 K;  1HQM A;  3GTM K;  1I50 C;  2E2I C;  1YNN A;  5IP7 C;  4OIN A;  3S14 C;  4A3L C;  5TMF A;  4NOI A;  2JA7 K;  3RZD K;  4AYB D;  1ZYR A;  2E2J K;  2E2H K;  2R93 K;  3HKZ L;  4BBR K;  3M3Y C;  5C3E K;  2JA6 C;  5FLM C;  2NVQ C;  3H3V D;  4BBS C;  1R9T K;  2R7Z C;  5C44 K;  3H0G K;  5IYD K;  4JK1 A;  3K7A K;  4A3M K;  4G7O A;  3GTG C;  5M3M K;  2NVT K;  1WCM K;  1I3Q K;  5D4D A;  4A3G C;  4OIO A;  2R92 C;  1K83 C;  4ZH4 A;  3S15 C;  1TWH K;  5IP9 K;  1Y1W K;  1TWA K;  1TWG K;  3HOX K;  3S16 K;  3HOV C;  3HKZ D;  5M5W K;  3GTJ C;  4A3D K;  1I50 K;  3S14 K;  4A3L K;  3GTK C;  5IYC C;  3S17 C;  1I6H C;  4QJV B;  1Y1V C;  4LK1 A;  1TWC C;  2NVY C;  3HOU C;  3S2D C;  2A6H A;  5C4J C;  2O5J A;  5FLM K;  2JA6 K;  4A3F K;  3CQZ C;  2NVQ K;  4BBS K;  4C2M C;  2R7Z K;  4C3I C;  2JA8 C;  4A3C C;  4XSZ A;  2Y0S L;  4Y7N C;  3GTO K;  4Q5S A;  3GTP C;  3WOD A;  4C3J C;  3RZO C;  3GTG K;  2A6E A;  1YNJ A;  4LK0 A;  3HOZ C;  1K83 K;  5M5Y K;  2R92 K;  3S15 K;  4A3G K;  5M5X K;  4OIQ A;  4MQ9 A;  3HOV K;  4GZY A;  3HOW C;  2PMZ L;  2YU9 C;  3HOY C;  4A3I C;  3PO3 C;  3GTJ K;  2A68 A;  4LLG A;  3S1R C;  3S2H C;  4A3K C;  3GTK K;  5IYC K;  3PO2 K;  3GTL C;  3M4O K;  3S1Q C;  4LJZ A;  2WAQ L;  4BY1 C;  4KMU A;  2Y0S D;  3GTM C;  4Y52 C;  1Y1V K;  5IP7 K;  2E2I K;  4BY7 C;  3GTQ C;  2VUM C;  4X6A C;  1TWC K;  3S1N C;  5M3F K;  3S2D K;  3FKI C;  5C4J K;  3M3Y K;  4BBR C;  4A3B C;  3CQZ K;  4C3I K;  2A69 A;  4A3E C;  5IYB C;  1SFO C;  4Y7N K;  4A3J C;  3GTP K;  4MEX A;  2PMZ D;  2B63 C;  4C3J K;  3RZO K;  5FJ8 K;  4G7Z A;  5IYD C;  3HOZ K;  2BE5 A;  3K7A C;  2WAQ D;  3I4M C;  3S1M C;  1WCM C;  4BXX C;  4KN4 A;  1TWH C;  3I4N C;  3HOW K;  3HOY K;  4A3I K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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