1RHOA

Structure of rho guanine nucleotide dissociation inhibitor
Total Genus 28
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
28
sequence length
145
structure length
145
Chain Sequence
VAVSADPNVPNVVVTGLTLVCSSAPGPLELDLTGDLESFKKQSFVLKEGVEYRIKISFRVNREIVSGMKYIEHTYRKGVKIDKTDYMVGSYGPRAEEYEFLTPVEEAPKGMLARGSYSIKSRFTDDDKTDHLSWEWNLTIKKDWK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Inhibitor
molecule keywords RHO GDP-DISSOCIATION INHIBITOR 1
publication title A modulator of rho family G proteins, rhoGDI, binds these G proteins via an immunoglobulin-like domain and a flexible N-terminal arm.
pubmed doi rcsb
source organism Homo sapiens
total genus 28
structure length 145
sequence length 145
chains with identical sequence B, C
ec nomenclature
pdb deposition date 1996-10-12
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.50.30 Mainly Beta Distorted Sandwich Coagulation Factor XIII; Chain A, domain 1 Coagulation Factor XIII, subunit A, domain 1 1rhoA00
1FSTA 1DS6B 1HH4D 1KMTA 2JHSA 2JI0A 2JHVA 1FT0A 1AJWA 2JHTA 2JHXA 2JHZA 2JHYA 4F38B 2BXWA 2JHWA 1FT3A 1QVYA 1DOAB 1GDFA 1RHOA 2JHUA 1FSOA
chains in the Genus database with same CATH superfamily
4GOJC 3T5IA 4OY8A 2LHSA 2JHSA 4FMRA 4JV8B 3JUAA 5IJUA 3RBQA 2JHVA 2VTCA 3EJAA 3L15A 1AJWA 4JVBB 5F2UA 3GQQA 5ACIA 5ACJA 5TB5B 5DQ8A 5HNOA 4GBOA 5ACGA 4MAHA 2JHUA 4EIRA 4ALRA 2BEMA 4ALQA 5ACFA 4D7UA 5L7KA 4ALSA 1KSGB 2YETA 5FTZA 5HNPA 4D7VA 5TARB 2JI0A 1FT0A 4B5QA 4EISA 2JHWA 4RE1A 3EIIA 2BENA 4ALEA 1RHOA 5HGUA 4LN0A 4QI8A 5FJQA 2YOWA 5EMWA 5E8FA 1KSJB 4GOKC 1KMTA 5FOHA 3T5GB 1KSHB 5ACHA 4JHPB 5AA7A 2XWXA 2JHYA 2R5OA 1FT3A 4OY7A 4ALTA 3ZUDA 3UAMA 3KYSA 1QVYA 1GDFA 4MAIA 1FSTA 5E80A 4ALCA 1DS6B 1HH4D 2YOYA 4JV6B 4EISB 2YOXA 4A02A 2JHTA 2JHXA 2JHZA 4F38B 2BXWA 4OY6A 5DQEA 5EMVA 1DOAB 1FSOA 4JVFB
chains in the Genus database with same CATH topology
1FSTA 1DS6B 1HH4D 1KMTA 2JHSA 2JI0A 2JHVA 1FT0A 1AJWA 2JHTA 2JHXA 2JHZA 2JHYA 4F38B 2BXWA 2JHWA 1FT3A 1QVYA 1DOAB 1GDFA 1RHOA 2JHUA 1FSOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1FST A;  1DS6 B;  1HH4 D;  1KMT A;  2JHS A;  2JI0 A;  2JHV A;  1FT0 A;  1AJW A;  2JHT A;  2JHX A;  2JHZ A;  2JHY A;  4F38 B;  2BXW A;  2JHW A;  1FT3 A;  1QVY A;  1DOA B;  1GDF A;  1RHO A;  2JHU A;  1FSO A; 
#chains in the Genus database with same CATH topology
 4GOJ C;  3T5I A;  4OY8 A;  2LHS A;  2JHS A;  4FMR A;  4JV8 B;  3JUA A;  5IJU A;  3RBQ A;  2JHV A;  2VTC A;  3EJA A;  3L15 A;  1AJW A;  4JVB B;  5F2U A;  3GQQ A;  5ACI A;  5ACJ A;  5TB5 B;  5DQ8 A;  5HNO A;  4GBO A;  5ACG A;  4MAH A;  2JHU A;  4EIR A;  4ALR A;  2BEM A;  4ALQ A;  5ACF A;  4D7U A;  5L7K A;  4ALS A;  1KSG B;  2YET A;  5FTZ A;  5HNP A;  4D7V A;  5TAR B;  2JI0 A;  1FT0 A;  4B5Q A;  4EIS A;  2JHW A;  4RE1 A;  3EII A;  2BEN A;  4ALE A;  1RHO A;  5HGU A;  4LN0 A;  4QI8 A;  5FJQ A;  2YOW A;  5EMW A;  5E8F A;  1KSJ B;  4GOK C;  1KMT A;  5FOH A;  3T5G B;  1KSH B;  5ACH A;  4JHP B;  5AA7 A;  2XWX A;  2JHY A;  2R5O A;  1FT3 A;  4OY7 A;  4ALT A;  3ZUD A;  3UAM A;  3KYS A;  1QVY A;  1GDF A;  4MAI A;  1FST A;  5E80 A;  4ALC A;  1DS6 B;  1HH4 D;  2YOY A;  4JV6 B;  4EIS B;  2YOX A;  4A02 A;  2JHT A;  2JHX A;  2JHZ A;  4F38 B;  2BXW A;  4OY6 A;  5DQE A;  5EMV A;  1DOA B;  1FSO A;  4JVF B; 
#chains in the Genus database with same CATH homology
 1FST A;  1DS6 B;  1HH4 D;  1KMT A;  2JHS A;  2JI0 A;  2JHV A;  1FT0 A;  1AJW A;  2JHT A;  2JHX A;  2JHZ A;  2JHY A;  4F38 B;  2BXW A;  2JHW A;  1FT3 A;  1QVY A;  1DOA B;  1GDF A;  1RHO A;  2JHU A;  1FSO A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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