1RSDA

Dhna complex with 3-(5-amino-7-hydroxy-[1,2,3]triazolo[4,5-d]pyrimidin-2-yl)-n-[2-(2-hydroxymethyl-phenylsulfanyl)-benzyl]-benzamide
Total Genus 32
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
32
sequence length
121
structure length
121
Chain Sequence
MQDTIFLKGMRFYGYHGALSAENEIGQIFKVDVTLKVDLSEAGRTDNVIDTVHYGEVFEEVKSIMEGKAVNLLEHLAERIANRINSQYNRVMETKVRITKENPPIPGHYDGVGIEIVRENK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Lyase
molecule keywords Dihydroneopterin aldolase
publication title Discovery of Potent Inhibitors of Dihydroneopterin Aldolase Using CrystaLEAD High-Throughput X-ray Crystallographic Screening and Structure-Directed Lead Optimization.
pubmed doi rcsb
source organism Staphylococcus aureus
total genus 32
structure length 121
sequence length 121
ec nomenclature ec 4.1.2.25: Dihydroneopterin aldolase.
pdb deposition date 2003-12-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02152 FolB Dihydroneopterin aldolase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1130.10 Alpha Beta 2-Layer Sandwich GTP Cyclohydrolase I, domain 2 GTP Cyclohydrolase I, domain 2 1rsdA00
2NM2A 1WURA 1Z9WA 1A8RA 1RRYA 1NBUB 3S19A 3O1KA 2O90A 3RJ4A 1FB1A 1NBUC 1GTPA 1N3SA 1RS4A 1FBXA 4F8BA 1B9LA 4UQFA 1DHNA 4FGCA 1IS7A 1RRWA 1IS8A 4AEYA 3BP1A 1WM9A 4IQIA 1NBUA 3V9OA 1WPLA 5F3MA 1A9CA 4GHMA 3R2EA 4DU6A 1N3TA 3RZPA 3UXVA 1RSIA 3UXJA 1RSDA 1WUQA 2NM3A 1SQLA 2CG8A 2DHNA 1RRIA 1N3RA 1U68A 1RS2A 5FARA
chains in the Genus database with same CATH superfamily
2NM2A 1WURA 1Z9WA 1A8RA 1RRYA 1NBUB 3S19A 3O1KA 2O90A 3RJ4A 1FB1A 1NBUC 1GTPA 1N3SA 1RS4A 1FBXA 4F8BA 1B9LA 4UQFA 1DHNA 4FGCA 1IS7A 1RRWA 1IS8A 4AEYA 3BP1A 1WM9A 4IQIA 1NBUA 3V9OA 1WPLA 5F3MA 1A9CA 4GHMA 3R2EA 4DU6A 1N3TA 3RZPA 3UXVA 1RSIA 3UXJA 1RSDA 1WUQA 2NM3A 1SQLA 2CG8A 2DHNA 1RRIA 1N3RA 1U68A 1RS2A 5FARA
chains in the Genus database with same CATH topology
2NM2A 1WURA 1Z9WA 1A8RA 1RRYA 1NBUB 3S19A 3O1KA 2O90A 3RJ4A 1FB1A 1NBUC 1GTPA 1N3SA 1RS4A 1FBXA 4F8BA 1B9LA 4UQFA 1DHNA 4FGCA 1IS7A 1RRWA 1IS8A 4AEYA 3BP1A 1WM9A 4IQIA 1NBUA 3V9OA 1WPLA 5F3MA 1A9CA 4GHMA 3R2EA 4DU6A 1N3TA 3RZPA 3UXVA 1RSIA 3UXJA 1RSDA 1WUQA 2NM3A 1SQLA 2CG8A 2DHNA 1RRIA 1N3RA 1U68A 1RS2A 5FARA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2NM2 A;  1WUR A;  1Z9W A;  1A8R A;  1RRY A;  1NBU B;  3S19 A;  3O1K A;  2O90 A;  3RJ4 A;  1FB1 A;  1NBU C;  1GTP A;  1N3S A;  1RS4 A;  1FBX A;  4F8B A;  1B9L A;  4UQF A;  1DHN A;  4FGC A;  1IS7 A;  1RRW A;  1IS8 A;  4AEY A;  3BP1 A;  1WM9 A;  4IQI A;  1NBU A;  3V9O A;  1WPL A;  5F3M A;  1A9C A;  4GHM A;  3R2E A;  4DU6 A;  1N3T A;  3RZP A;  3UXV A;  1RSI A;  3UXJ A;  1RSD A;  1WUQ A;  2NM3 A;  1SQL A;  2CG8 A;  2DHN A;  1RRI A;  1N3R A;  1U68 A;  1RS2 A;  5FAR A; 
#chains in the Genus database with same CATH topology
 2NM2 A;  1WUR A;  1Z9W A;  1A8R A;  1RRY A;  1NBU B;  3S19 A;  3O1K A;  2O90 A;  3RJ4 A;  1FB1 A;  1NBU C;  1GTP A;  1N3S A;  1RS4 A;  1FBX A;  4F8B A;  1B9L A;  4UQF A;  1DHN A;  4FGC A;  1IS7 A;  1RRW A;  1IS8 A;  4AEY A;  3BP1 A;  1WM9 A;  4IQI A;  1NBU A;  3V9O A;  1WPL A;  5F3M A;  1A9C A;  4GHM A;  3R2E A;  4DU6 A;  1N3T A;  3RZP A;  3UXV A;  1RSI A;  3UXJ A;  1RSD A;  1WUQ A;  2NM3 A;  1SQL A;  2CG8 A;  2DHN A;  1RRI A;  1N3R A;  1U68 A;  1RS2 A;  5FAR A; 
#chains in the Genus database with same CATH homology
 2NM2 A;  1WUR A;  1Z9W A;  1A8R A;  1RRY A;  1NBU B;  3S19 A;  3O1K A;  2O90 A;  3RJ4 A;  1FB1 A;  1NBU C;  1GTP A;  1N3S A;  1RS4 A;  1FBX A;  4F8B A;  1B9L A;  4UQF A;  1DHN A;  4FGC A;  1IS7 A;  1RRW A;  1IS8 A;  4AEY A;  3BP1 A;  1WM9 A;  4IQI A;  1NBU A;  3V9O A;  1WPL A;  5F3M A;  1A9C A;  4GHM A;  3R2E A;  4DU6 A;  1N3T A;  3RZP A;  3UXV A;  1RSI A;  3UXJ A;  1RSD A;  1WUQ A;  2NM3 A;  1SQL A;  2CG8 A;  2DHN A;  1RRI A;  1N3R A;  1U68 A;  1RS2 A;  5FAR A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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