1RSIA

Dhna complex with 2-amino-5-bromo-3-hydroxy-6-phenylpyrimidine
Total Genus 30
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
30
sequence length
121
structure length
121
Chain Sequence
MQDTIFLKGMRFYGYHGALSAENEIGQIFKVDVTLKVDLSEAGRTDNVIDTVHYGEVFEEVKSIMEGKAVNLLEHLAERIANRINSQYNRVMETKVRITKENPPIPGHYDGVGIEIVRENK
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Lyase
molecule keywords Dihydroneopterin aldolase
publication title Discovery of Potent Inhibitors of Dihydroneopterin Aldolase Using CrystaLEAD High-Throughput X-ray Crystallographic Screening and Structure-Directed Lead Optimization.
pubmed doi rcsb
source organism Staphylococcus aureus
total genus 30
structure length 121
sequence length 121
ec nomenclature ec 4.1.2.25: Dihydroneopterin aldolase.
pdb deposition date 2003-12-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02152 FolB Dihydroneopterin aldolase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1130.10 Alpha Beta 2-Layer Sandwich GTP Cyclohydrolase I, domain 2 GTP Cyclohydrolase I, domain 2 1rsiA00
2DHNA 3UXVA 4IQIA 4DU6A 3RJ4A 4AEYA 1RSIA 1FBXA 1RRWA 2CG8A 1Z9WA 1WPLA 4FGCA 1RSDA 1NBUA 1WURA 1GTPA 1A9CA 1RS4A 1IS8A 1SQLA 1B9LA 1NBUC 1WM9A 3RZPA 1RS2A 1DHNA 5F3MA 3O1KA 1N3TA 2O90A 4F8BA 2NM3A 1WUQA 1N3SA 1A8RA 1RRYA 3V9OA 4UQFA 2NM2A 1NBUB 3BP1A 5FARA 3S19A 1U68A 3R2EA 1RRIA 4GHMA 1FB1A 3UXJA 1N3RA 1IS7A
chains in the Genus database with same CATH superfamily
2DHNA 3UXVA 4IQIA 4DU6A 3RJ4A 4AEYA 1RSIA 1FBXA 1RRWA 2CG8A 1Z9WA 1WPLA 4FGCA 1RSDA 1NBUA 1WURA 1GTPA 1A9CA 1RS4A 1IS8A 1SQLA 1B9LA 1NBUC 1WM9A 3RZPA 1RS2A 1DHNA 5F3MA 3O1KA 1N3TA 2O90A 4F8BA 2NM3A 1WUQA 1N3SA 1A8RA 1RRYA 3V9OA 4UQFA 2NM2A 1NBUB 3BP1A 5FARA 3S19A 1U68A 3R2EA 1RRIA 4GHMA 1FB1A 3UXJA 1N3RA 1IS7A
chains in the Genus database with same CATH topology
2DHNA 3UXVA 4IQIA 4DU6A 3RJ4A 4AEYA 1RSIA 1FBXA 1RRWA 2CG8A 1Z9WA 1WPLA 4FGCA 1RSDA 1NBUA 1WURA 1GTPA 1A9CA 1RS4A 1IS8A 1SQLA 1B9LA 1NBUC 1WM9A 3RZPA 1RS2A 1DHNA 5F3MA 3O1KA 1N3TA 2O90A 4F8BA 2NM3A 1WUQA 1N3SA 1A8RA 1RRYA 3V9OA 4UQFA 2NM2A 1NBUB 3BP1A 5FARA 3S19A 1U68A 3R2EA 1RRIA 4GHMA 1FB1A 3UXJA 1N3RA 1IS7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2DHN A;  3UXV A;  4IQI A;  4DU6 A;  3RJ4 A;  4AEY A;  1RSI A;  1FBX A;  1RRW A;  2CG8 A;  1Z9W A;  1WPL A;  4FGC A;  1RSD A;  1NBU A;  1WUR A;  1GTP A;  1A9C A;  1RS4 A;  1IS8 A;  1SQL A;  1B9L A;  1NBU C;  1WM9 A;  3RZP A;  1RS2 A;  1DHN A;  5F3M A;  3O1K A;  1N3T A;  2O90 A;  4F8B A;  2NM3 A;  1WUQ A;  1N3S A;  1A8R A;  1RRY A;  3V9O A;  4UQF A;  2NM2 A;  1NBU B;  3BP1 A;  5FAR A;  3S19 A;  1U68 A;  3R2E A;  1RRI A;  4GHM A;  1FB1 A;  3UXJ A;  1N3R A;  1IS7 A; 
#chains in the Genus database with same CATH topology
 2DHN A;  3UXV A;  4IQI A;  4DU6 A;  3RJ4 A;  4AEY A;  1RSI A;  1FBX A;  1RRW A;  2CG8 A;  1Z9W A;  1WPL A;  4FGC A;  1RSD A;  1NBU A;  1WUR A;  1GTP A;  1A9C A;  1RS4 A;  1IS8 A;  1SQL A;  1B9L A;  1NBU C;  1WM9 A;  3RZP A;  1RS2 A;  1DHN A;  5F3M A;  3O1K A;  1N3T A;  2O90 A;  4F8B A;  2NM3 A;  1WUQ A;  1N3S A;  1A8R A;  1RRY A;  3V9O A;  4UQF A;  2NM2 A;  1NBU B;  3BP1 A;  5FAR A;  3S19 A;  1U68 A;  3R2E A;  1RRI A;  4GHM A;  1FB1 A;  3UXJ A;  1N3R A;  1IS7 A; 
#chains in the Genus database with same CATH homology
 2DHN A;  3UXV A;  4IQI A;  4DU6 A;  3RJ4 A;  4AEY A;  1RSI A;  1FBX A;  1RRW A;  2CG8 A;  1Z9W A;  1WPL A;  4FGC A;  1RSD A;  1NBU A;  1WUR A;  1GTP A;  1A9C A;  1RS4 A;  1IS8 A;  1SQL A;  1B9L A;  1NBU C;  1WM9 A;  3RZP A;  1RS2 A;  1DHN A;  5F3M A;  3O1K A;  1N3T A;  2O90 A;  4F8B A;  2NM3 A;  1WUQ A;  1N3S A;  1A8R A;  1RRY A;  3V9O A;  4UQF A;  2NM2 A;  1NBU B;  3BP1 A;  5FAR A;  3S19 A;  1U68 A;  3R2E A;  1RRI A;  4GHM A;  1FB1 A;  3UXJ A;  1N3R A;  1IS7 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...