1RTWA

X-ray structure of pf1337, a tena homologue from pyrococcus furiosus. northeast structural genomics research consortium (nesg) target pfr34
Total Genus 86
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
86
sequence length
206
structure length
206
Chain Sequence
MFSEELIKENENIWRRFLPHKFLIEMAENTIKKENFEKWLVNDYYFVKNALRFMALLMAKAPDDLLPFFAESIYYISKELEMFEKKAQELGISLNGEIDWRAKSYVNYLLSVASLGSFLEGFTALYCEEKAYYEAWKWVRENLKERSPYQEFINHWSSQEFGEYVKRIEKILNSLAEKHGEFEKERAREVFKEVSKFELIFWDIAY
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Structural genomics, unknown function
molecule keywords transcriptional activator, putative
publication title The 2.35 A structure of the TenA homolog from Pyrococcus furiosus supports an enzymatic function in thiamine metabolism.
pubmed doi rcsb
source organism Pyrococcus furiosus
total genus 86
structure length 206
sequence length 206
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2003-12-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03070 TENA_THI-4 TENA/THI-4/PQQC family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.910.10 Mainly Alpha Up-down Bundle Heme Oxygenase; Chain A Heme oxygenase-like 1rtwA00
3MOOA 1OTVA 1YAFA 1WNWA 2A2MA 2Q32A 3I8RA 4RAJA 4GPFA 1XK1A 3TGMA 1DVGA 3HNHA 1XJZA 1N3UA 1XK2A 4G99A 3HMLA 2DY5A 1IX3A 1OTWA 4G8PA 1UDDA 1V8XA 1WE1A 4WWZA 1IW0A 3B5OA 1TO9B 1SK7A 2A2OA 4MECA 1WNVA 1WOVA 2QPPA 1OZRA 4GPCA 2A6BA 1WZFA 3OQLA 2Q4XA 4G7PA 4GPHA 4LQXA 2RGZA 1IX4A 1UBBA 2E7EA 3HLXA 2Z68A 4WWJA 1YAKA 1J2CA 2GM7A 1WZDA 1ULXA 1TWRA 1TYHA 1OYLA 1IW1A 1J77A 1OYKA 1WWMA 1T5PA 1WZGA 1RTWA 3RM5A 3HOKA 1NI6A 3MVUA 1S13A 3B5PA 4G7UA 4G98A 1P3UA 1TWNA 1TO9A 4G7LA 3I9TA 2RD3A 2F2GA 2QCXA 1RCWA 2ZVUA 3CZYA 3DDEA 3BJDA 4G8UA 1J02A 1XK0A 3I9UA 1OZWA 2QZCA 3K4FA 4WMHA 1WOXA 3IBXA 1P3TA 1N45A 1Z72A 4WD4A 1DVEA 4NY7A 4G7TA 3NO6A 1WNXA 4G8WA 1WOWA 1IVJA 1XK3A 4GOHA 1S8CA 1IRMA 4WX0A 5BTQA 1P3VA 1OZEA 1OZLA 2GM8A 4FN6A 1VGIA
chains in the Genus database with same CATH superfamily
3MOOA 1OTVA 1YAFA 1WNWA 2A2MA 2Q32A 3I8RA 4RAJA 4GPFA 1XK1A 3TGMA 1DVGA 3HNHA 1XJZA 1N3UA 1XK2A 4G99A 3HMLA 2DY5A 1IX3A 1OTWA 4G8PA 1UDDA 1V8XA 1WE1A 4WWZA 1IW0A 3B5OA 1TO9B 1SK7A 2A2OA 4MECA 1WNVA 1WOVA 2QPPA 1OZRA 4GPCA 2A6BA 1WZFA 3OQLA 2Q4XA 4G7PA 2LCUA 4GPHA 4LQXA 2RGZA 1IX4A 1UBBA 2E7EA 3HLXA 2Z68A 4WWJA 1YAKA 1J2CA 2GM7A 1WZDA 1ULXA 1TWRA 1TYHA 1OYLA 1IW1A 1J77A 1OYKA 1WWMA 1T5PA 1WZGA 1RTWA 3RM5A 3HOKA 1NI6A 3MVUA 1S13A 3B5PA 4G7UA 4G98A 1P3UA 1TWNA 1TO9A 4G7LA 3I9TA 2RD3A 2F2GA 2QCXA 1RCWA 2ZVUA 3CZYA 3DDEA 3BJDA 4G8UA 1J02A 1XK0A 3I9UA 1OZWA 2QZCA 3K4FA 4WMHA 1WOXA 3IBXA 1P3TA 1N45A 1Z72A 4WD4A 1DVEA 4NY7A 4G7TA 3NO6A 1WNXA 4G8WA 1WOWA 1IVJA 1XK3A 4GOHA 1S8CA 1IRMA 4WX0A 5BTQA 1P3VA 1OZEA 1OZLA 2GM8A 4FN6A 1VGIA
chains in the Genus database with same CATH topology
3MOOA 1OTVA 1YAFA 1WNWA 2A2MA 2Q32A 3I8RA 4RAJA 4GPFA 1XK1A 3TGMA 1DVGA 3HNHA 1XJZA 1N3UA 1XK2A 4G99A 3HMLA 2DY5A 1IX3A 1OTWA 4G8PA 1UDDA 1V8XA 1WE1A 4WWZA 1IW0A 3B5OA 1TO9B 1SK7A 2A2OA 4MECA 1WNVA 1WOVA 2QPPA 1OZRA 4GPCA 2A6BA 1WZFA 3OQLA 2Q4XA 4G7PA 4GPHA 4LQXA 2RGZA 1IX4A 1UBBA 2E7EA 3HLXA 2Z68A 4WWJA 1YAKA 1J2CA 2GM7A 1WZDA 1ULXA 1TWRA 1TYHA 1OYLA 1IW1A 1J77A 1OYKA 1WWMA 1T5PA 1WZGA 1RTWA 3RM5A 3HOKA 1NI6A 3MVUA 1S13A 3B5PA 4G7UA 4G98A 1P3UA 1TWNA 1TO9A 4G7LA 3I9TA 2RD3A 2F2GA 2QCXA 1RCWA 2ZVUA 3CZYA 3DDEA 3BJDA 4G8UA 1J02A 1XK0A 3I9UA 1OZWA 2QZCA 3K4FA 4WMHA 1WOXA 3IBXA 1P3TA 1N45A 1Z72A 4WD4A 1DVEA 4NY7A 4G7TA 3NO6A 1WNXA 4G8WA 1WOWA 1IVJA 1XK3A 4GOHA 1S8CA 1IRMA 4WX0A 5BTQA 1P3VA 1OZEA 1OZLA 2GM8A 4FN6A 1VGIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3MOO A;  1OTV A;  1YAF A;  1WNW A;  2A2M A;  2Q32 A;  3I8R A;  4RAJ A;  4GPF A;  1XK1 A;  3TGM A;  1DVG A;  3HNH A;  1XJZ A;  1N3U A;  1XK2 A;  4G99 A;  3HML A;  2DY5 A;  1IX3 A;  1OTW A;  4G8P A;  1UDD A;  1V8X A;  1WE1 A;  4WWZ A;  1IW0 A;  3B5O A;  1TO9 B;  1SK7 A;  2A2O A;  4MEC A;  1WNV A;  1WOV A;  2QPP A;  1OZR A;  4GPC A;  2A6B A;  1WZF A;  3OQL A;  2Q4X A;  4G7P A;  4GPH A;  4LQX A;  2RGZ A;  1IX4 A;  1UBB A;  2E7E A;  3HLX A;  2Z68 A;  4WWJ A;  1YAK A;  1J2C A;  2GM7 A;  1WZD A;  1ULX A;  1TWR A;  1TYH A;  1OYL A;  1IW1 A;  1J77 A;  1OYK A;  1WWM A;  1T5P A;  1WZG A;  1RTW A;  3RM5 A;  3HOK A;  1NI6 A;  3MVU A;  1S13 A;  3B5P A;  4G7U A;  4G98 A;  1P3U A;  1TWN A;  1TO9 A;  4G7L A;  3I9T A;  2RD3 A;  2F2G A;  2QCX A;  1RCW A;  2ZVU A;  3CZY A;  3DDE A;  3BJD A;  4G8U A;  1J02 A;  1XK0 A;  3I9U A;  1OZW A;  2QZC A;  3K4F A;  4WMH A;  1WOX A;  3IBX A;  1P3T A;  1N45 A;  1Z72 A;  4WD4 A;  1DVE A;  4NY7 A;  4G7T A;  3NO6 A;  1WNX A;  4G8W A;  1WOW A;  1IVJ A;  1XK3 A;  4GOH A;  1S8C A;  1IRM A;  4WX0 A;  5BTQ A;  1P3V A;  1OZE A;  1OZL A;  2GM8 A;  4FN6 A;  1VGI A; 
#chains in the Genus database with same CATH topology
 3MOO A;  1OTV A;  1YAF A;  1WNW A;  2A2M A;  2Q32 A;  3I8R A;  4RAJ A;  4GPF A;  1XK1 A;  3TGM A;  1DVG A;  3HNH A;  1XJZ A;  1N3U A;  1XK2 A;  4G99 A;  3HML A;  2DY5 A;  1IX3 A;  1OTW A;  4G8P A;  1UDD A;  1V8X A;  1WE1 A;  4WWZ A;  1IW0 A;  3B5O A;  1TO9 B;  1SK7 A;  2A2O A;  4MEC A;  1WNV A;  1WOV A;  2QPP A;  1OZR A;  4GPC A;  2A6B A;  1WZF A;  3OQL A;  2Q4X A;  4G7P A;  2LCU A;  4GPH A;  4LQX A;  2RGZ A;  1IX4 A;  1UBB A;  2E7E A;  3HLX A;  2Z68 A;  4WWJ A;  1YAK A;  1J2C A;  2GM7 A;  1WZD A;  1ULX A;  1TWR A;  1TYH A;  1OYL A;  1IW1 A;  1J77 A;  1OYK A;  1WWM A;  1T5P A;  1WZG A;  1RTW A;  3RM5 A;  3HOK A;  1NI6 A;  3MVU A;  1S13 A;  3B5P A;  4G7U A;  4G98 A;  1P3U A;  1TWN A;  1TO9 A;  4G7L A;  3I9T A;  2RD3 A;  2F2G A;  2QCX A;  1RCW A;  2ZVU A;  3CZY A;  3DDE A;  3BJD A;  4G8U A;  1J02 A;  1XK0 A;  3I9U A;  1OZW A;  2QZC A;  3K4F A;  4WMH A;  1WOX A;  3IBX A;  1P3T A;  1N45 A;  1Z72 A;  4WD4 A;  1DVE A;  4NY7 A;  4G7T A;  3NO6 A;  1WNX A;  4G8W A;  1WOW A;  1IVJ A;  1XK3 A;  4GOH A;  1S8C A;  1IRM A;  4WX0 A;  5BTQ A;  1P3V A;  1OZE A;  1OZL A;  2GM8 A;  4FN6 A;  1VGI A; 
#chains in the Genus database with same CATH homology
 3MOO A;  1OTV A;  1YAF A;  1WNW A;  2A2M A;  2Q32 A;  3I8R A;  4RAJ A;  4GPF A;  1XK1 A;  3TGM A;  1DVG A;  3HNH A;  1XJZ A;  1N3U A;  1XK2 A;  4G99 A;  3HML A;  2DY5 A;  1IX3 A;  1OTW A;  4G8P A;  1UDD A;  1V8X A;  1WE1 A;  4WWZ A;  1IW0 A;  3B5O A;  1TO9 B;  1SK7 A;  2A2O A;  4MEC A;  1WNV A;  1WOV A;  2QPP A;  1OZR A;  4GPC A;  2A6B A;  1WZF A;  3OQL A;  2Q4X A;  4G7P A;  4GPH A;  4LQX A;  2RGZ A;  1IX4 A;  1UBB A;  2E7E A;  3HLX A;  2Z68 A;  4WWJ A;  1YAK A;  1J2C A;  2GM7 A;  1WZD A;  1ULX A;  1TWR A;  1TYH A;  1OYL A;  1IW1 A;  1J77 A;  1OYK A;  1WWM A;  1T5P A;  1WZG A;  1RTW A;  3RM5 A;  3HOK A;  1NI6 A;  3MVU A;  1S13 A;  3B5P A;  4G7U A;  4G98 A;  1P3U A;  1TWN A;  1TO9 A;  4G7L A;  3I9T A;  2RD3 A;  2F2G A;  2QCX A;  1RCW A;  2ZVU A;  3CZY A;  3DDE A;  3BJD A;  4G8U A;  1J02 A;  1XK0 A;  3I9U A;  1OZW A;  2QZC A;  3K4F A;  4WMH A;  1WOX A;  3IBX A;  1P3T A;  1N45 A;  1Z72 A;  4WD4 A;  1DVE A;  4NY7 A;  4G7T A;  3NO6 A;  1WNX A;  4G8W A;  1WOW A;  1IVJ A;  1XK3 A;  4GOH A;  1S8C A;  1IRM A;  4WX0 A;  5BTQ A;  1P3V A;  1OZE A;  1OZL A;  2GM8 A;  4FN6 A;  1VGI A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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