1SFOC

Rna polymerase ii strand separated elongation complex
Total Genus 45
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
45
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords RNA STRAND
publication title Structural Basis of Transcription: Separation of RNA from DNA by RNA Polymerase II
pubmed doi rcsb
molecule tags Transcription/dna-rna hybrid
total genus 45
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2004-02-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 1sfoC01
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 1sfoC02
3S1RK 5IYCC 2E2JC 2JA7C 4BY7C 3GTQC 3GTJC 1TWAK 4BY1K 2E2HK 2NVQC 2VUMK 3S1MK 5FLMK 5IP9K 4Q4ZA 3GTPC 4NOIA 1I50K 4A3LK 3HOVC 5IYBC 3S15C 3PO3K 4ZH4A 4A3DC 5IP9C 2B63K 3M3YK 1TWFC 3PO2C 4A3CK 3HOXC 2R93K 3RZOC 5M3FK 3M4OK 5C3EC 3S2HC 3FKIK 4A93K 3S2DC 3HOZK 2R7ZC 4C3IK 4C3JK 1YNNA 4A3MK 2A68A 5TMFA 1TWGK 2E2IC 4C3HK 4XLPA 4A3IC 1R9TC 3GTOC 2O5JA 4AYBL 2A69A 3DXJA 3S17K 2PA8L 4Q5SA 5M5XK 1WCMC 1TWGC 2CW0A 3S1QK 5D4DA 3I4MC 3I4NC 1HQMA 1TWCC 3CQZK 2JA8K 4C2MC 5C4XK 4A3GK 3H3VL 2NVXK 4A3EC 1SMYA 3S1RC 3GTKK 4YG2A 4LK1A 3CQZC 1TWAC 4BY1C 4Y52K 2PA8D 2E2HC 4A3GC 1I3QK 4XSXA 2VUMC 4A3JK 3S1MC 5IP7K 5FLMC 1I6HK 1I50C 4BBSK 2PMZL 4A3LC 4OINA 2Y0SL 3PO3C 4OIRA 2B63C 1Y1WK 3S14K 4A3FK 4BBSC 3M3YC 4QJVB 3H3VD 4A3CC 3GTGK 2R93C 2R92K 4X6AK 2NVTK 3RZDK 3GTMK 3M4OC 4A93C 4Y7NK 3FKIC 1Y1WC 4OIQA 4YFXA 3HOZC 1K83K 4C3IC 4C3JC 4A3MC 4A3BK 1TWHK 4C3HC 3S17C 4G7ZA 3S16K 2YU9K 2PMZD 2JA6K 4KN4A 4QIWL 4LJZA 3HOUK 5TMCA 1I6VA 2A6HA 3S1QC 4GZYA 4A3KK 2JA5K 5C44K 3GTLK 4OIOA 3EQLA 1YNJA 4XLNA 1Y1VK 4KMUA 4AYBD 2JA8C 2WAQL 5M5WK 5C4XC 5IYDK 1XPPA 3H0GK 2NVXC 4MQ9A 3HOWK 3HOYK 1SFOK 3GTKC 4Y52C 1I3QC 4QIWD 2NVYK 4A3JC 3K7AK 5IP7C 1I6HC 4BXXK 4YFNA 4BBRK 4YFKA 5IYCK 4MEYA 2E2JK 2JA7K 3GTJK 3HKZL 3GTQK 3S1NK 4BY7K 2WAQD 5C4JK 2NVQK 3S14C 4A3FC 3GTGC 2WB1L 4OIPA 3GTPK 4MEXA 4X6AC 2R92C 5M5YK 3S1NC 2NVTC 2O5IA 3RZDC 3GTMC 4Y7NC 5IYBK 5C4JC 3HOVK 2PPBA 3S15K 4A3BC 4A3DK 1K83C 2Y0SD 3WODA 2BE5A 1TWFK 1TWHC 3PO2K 3HOXK 4G7OA 4LK0A 3S16C 1ZYRA 2YU9C 2JA6C 5C3EK 3RZOK 3S2HK 3S2DK 3HKZD 2R7ZK 4LLGA 3HOUC 2JA5C 4A3KC 5FJ8K 1IW7A 2WB1D 5C44C 4A3IK 3GTLC 1R9TK 2E2IK 3GTOK 1Y1VC 1BDFA 1WCMK 4KN7A 5IYDC 5M3MK 2A6EA 3H0GC 4QJVA 3I4MK 3HOWC 3HOYC 3I4NK 4XSZA 4JK1A 1SFOC 1TWCK 4G7HA 4C2MK 2NVYC 3K7AC 4BXXC 4A3EK 4BBRC
chains in the Genus database with same CATH superfamily
3S1RK 5IYCC 4M1XA 5TJ3A 2NVQC 1Y1VA 3T00A 3AD9C 5FLMK 5E68A 2ZJRS 2FQTA 3S15C 1O27A 1SFOA 2B63K 4LR2A 1TWFC 1DCHA 2R93K 1JVIA 3M4OK 3S2HC 3FKIK 1ISEA 3GSIA 4A3MK 5TMFA 2O5JA 2A69A 3GTPA 4Q5SA 3PIPS 1WSVA 4LQYA 2GSOA 1TWCC 3CQZK 2XCOA 1PJ7A 3BP8C 3L4KA 3LPXA 3BP3A 4YG2A 4BY1C 3G4AA 4Y52K 2PA8D 2ZUFA 5IP7K 2P5MA 1TWGA 1FEUA 4BBSK 4A3LC 3PO3C 4OIRA 5JFEA 1Y1WK 3M3YC 4QJVB 2R92K 2NVTK 1EFWA 3HOZC 4BKWA 1WQFA 4C3JC 3TFIA 3SZZA 3LAPA 1J6VA 3S17C 3S16K 4QIWL 1GE9A 5TMCA 2B63A 2RH6A 4XLNA 2R93A 4KMAA 4WJ3M 5IYDK 3FKIA 3H0GK 2NVXC 3PIOS 1VH2A 1F7UA 1C0AA 1O28A 1B4AA 1I6HC 1X31C 4BBRK 1TWHA 5CHPA 5IYCK 2NVQK 3GTGC 1WIHA 2WB1L 2JA5A 1XXCA 3RZDC 4Y7NC 4KM9A 3S15K 3HXAA 1K83C 3AH5A 2BE5A 1TWFK 1TWHC 1XZQA 4GTEA 2JA6C 3S2HK 3HKZD 1XXBA 4LLGA 3BUEA 2JA5C 3SZYA 4A3KC 1IE0A 3FOEA 1ZVUA 2R92A 5M3MK 2GAHC 3HOYC 1TWCK 4G7HA 3MMLB 4BXXC 2P8TA 2JA7C 3GTJC 4BY1K 4GTAA 4WF9S 5IP9K 4NOIA 2EBBA 3H0GA 4A3LK 3HOVC 2L3UA 3PO3K 4ZH4A 5EGEA 4A3DC 1F9NA 3M3YK 1DCPA 2KXYA 5C3EC 3HOZK 2R7ZC 4C3JK 1YNNA 1ZQ1C 2JH3A 1TWGK 2E2IC 3S17K 3GEIA 1R9TC 3GTOC 4KMHA 1F7VA 1WCMC 2ZJQS 5D4DA 1EH1A 4GTDA 4WJ4A 1TWFA 3T02A 5JVHS 3H3VL 4KAWX 2NVXK 4LK1A 2V6SA 2E2HC 4A3GC 4KC6A 3FHZA 2VUMC 3OREA 1I6HK 1I50C 4OINA 1TWCA 3VA7A 3GTGK 4A3CC 3V4GA 3RZDK 4Y7NK 4A93C 1K83K 4C3IC 4KM8A 3AQPA 4GTCA 3NUHA 1TWHK 4C3HC 5IOQA 4G7ZA 2PMZD 2JA6K 4KN4A 3A8JA 4WCES 1I6VA 2A6HA 4GZYA 3N0BA 4A3KK 2JA5K 4OIOA 4AYBD 4U67S 2JA8C 5C4XC 1XPPA 2FQOA 3HOYK 2KQ1A 3GTKC 1UV7A 1O2AA 4A3JC 4BXXK 4YFNA 2JA7K 3L4JA 3IPJA 3GTJK 1WQHA 2WAQD 1AB4A 5C4JK 5DM6S 4ILDA 4A3FC 4OIPA 1J6XA 4IO9S 4X6AC 3S1NC 2O5IA 2NVXA 3HOVK 1WQGA 2PPBA 4IOAS 1O2BA 4A3DK 2Y0SD 1VRQC 4G7OA 4BLBA 2YU9C 1DCOA 5C3EK 2CFAB 2R7ZK 2E2IK 1R9TK 3GTLC 4FM9A 1IL2A 3GTOK 3GTGA 1F93A 1XXAA 3AQOA 1DD5A 1WCMK 4QJVA 3HOWC 1K83A 3G4CA 4G0UA 5EGHA 2D6FC 2NVYC 5DM7S 2JA6A 3ERED 5JVOA 1WORA 3GTQC 1J98A 4WFAS 2E2HK 3OEPA 1EQRA 2VUMK 2W7VA 1WOSA 1O24A 1I50K 3LYWA 3AD8C 3DLLS 4A3CK 3HOXC 3RZOC 4A93K 2JA7A 4C3IK 3GTJA 2A68A 4C3HK 4XLPA 4A3IC 4AYBL 5HQHA 3S0XA 2PA8L 1L0WA 1INNA 1HQMA 1JQWA 2JA8K 5C4XK 1O25A 3A8KA 2R7ZA 4A3EC 1SMYA 2GAGC 3GTKK 1V5VA 3CQZC 4IOCS 4GFQA 1TWAC 1JOEA 2PHCB 3GIRA 1R9TA 3GTOA 2E2IA 4A3JK 3S1MC 1WCMA 2ZJPS 2XCQA 2Y0SL 1WOPA 4A3FK 4BBSC 4X6AK 4XCHA 3FOFA 1VLOA 1Y1WC 4OIQA 4YFXA 2E2HA 2VUMA 2YU9K 1I50A 4LJZA 4GTFA 3S1QC 2GSNA 3CF5S 3GEHA 4KB2A 3GTLK 3A8IA 1YNJA 1VGXA 4KMUA 5M5WK 3HOWK 4BLAA 1I3QC 4QIWD 2NVYK 3GEEA 3OPFA 4RMFA 3GTQK 3HKZL 4KARA 5IOTA 3S14C 1J6WA 4MEXA 1G51A 3GTMC 1O29A 3GTKA 4A3BC 4J3NA 1BGWA 4KB4A 1B4BA 3HOXK 5HL7S 1O26A 3RZOK 1YX2A 3N0CA 2Y3PA 4KMDA 3HOUC 2WB1D 5C44C 4A3IK 2L5NA 1Y1VC 4FZBA 4O2DA 2ZUEA 4GT9A 1SFOC 1XZPB 2YU9A 3K7AC 1USMA 4A3EK 2E2JC 4BY7C 1TWAK 3GTLA 2V6TA 4LOWA 3S1MK 4Q4ZA 3GTPC 5IORA 1VJEA 1O2FB 5IYBC 2XCRB 5IP9C 4WILA 3PO2C 1ZXOA 1KQ4A 2NVYA 4AH6A 5M3FK 3S2DC 1EI6A 3GTQA 1IBAA 1XZPA 1ZBSA 3DXJA 3LAJA 5M5XK 4WFNS 1BS2A 1TWGC 2CW0A 3S1QK 3I4NC 3I4MC 2KPUA 3T01A 3TFHA 4WFBS 4GTLA 4C2MC 3GDZA 4A3GK 1YCLA 1HI9A 3S1RC 2GSUA 5HL8A 1XZQB 4KATA 5JVGS 2CFAA 1I3QK 4XSXA 5FLMC 3Q3QA 2PMZL 3ADAC 2B63C 3S14K 3H3VD 1PJ5A 2R93C 3GTMK 3M4OC 5IOSA 3FKIC 4PABA 2RGRA 4A3BK 3CQZA 4KASA 4A3MC 1TWAA 1USOA 4P5BA 1IQ0A 1BJTA 1WOOA 3QX3A 3HOUK 1RU0A 5C44K 5CJ9A 1IS1A 3EQLA 2WAQL 1Y1VK 1Y1WA 4MQ9A 1SFOK 2KWAA 4Y52C 1EK8A 2V6UA 3K7AK 5IP7C 4KDDA 5L46A 4YFKA 2E2JK 4MEYA 4BY7K 3S1NK 1WSRA 2ZFZA 4P5AA 3GTPK 5FJ8K 2R92C 5M5YK 2NVTC 4P9SA 5C4JC 5IYBK 3WODA 3AD7C 4C45A 3N3YA 1I3QA 3PO2K 4GTBA 4LK0A 3S16C 1ZYRA 3S2DK 3JSTA 3TFJA 1IW7A 3TTGA 4PAAA 1BDFA 1PJ6A 3GTMA 3CAGA 4KN7A 5IYDC 2A6EA 3H0GC 3I4NK 4G0VA 3I4MK 4XSZA 4JK1A 4DDQA 4C2MK 4G0WA 4BBRC
chains in the Genus database with same CATH topology
3S1RK 5IYCC 2E2JC 2JA7C 4BY7C 3GTQC 3GTJC 1TWAK 4BY1K 2E2HK 2NVQC 2VUMK 3S1MK 5FLMK 5IP9K 4Q4ZA 3GTPC 4NOIA 1I50K 4A3LK 3HOVC 5IYBC 3S15C 3PO3K 4ZH4A 4A3DC 5IP9C 2B63K 3M3YK 1TWFC 3PO2C 4A3CK 3HOXC 2R93K 3RZOC 5M3FK 3M4OK 5C3EC 3S2HC 3FKIK 4A93K 3S2DC 3HOZK 2R7ZC 4C3IK 4C3JK 1YNNA 4A3MK 2A68A 5TMFA 1TWGK 2E2IC 4C3HK 4XLPA 4A3IC 1R9TC 3GTOC 2O5JA 4AYBL 2A69A 3DXJA 3S17K 2PA8L 4Q5SA 5M5XK 1WCMC 1TWGC 2CW0A 3S1QK 5D4DA 3I4MC 3I4NC 1HQMA 1TWCC 3CQZK 2JA8K 4C2MC 5C4XK 4A3GK 3H3VL 2NVXK 4A3EC 1SMYA 3S1RC 3GTKK 4YG2A 4LK1A 3CQZC 1TWAC 4BY1C 4Y52K 2PA8D 2E2HC 4A3GC 1I3QK 4XSXA 2VUMC 4A3JK 3S1MC 5IP7K 5FLMC 1I6HK 1I50C 4BBSK 2PMZL 4A3LC 4OINA 2Y0SL 3PO3C 4OIRA 2B63C 1Y1WK 3S14K 4A3FK 4BBSC 3M3YC 4QJVB 3H3VD 4A3CC 3GTGK 2R93C 2R92K 4X6AK 2NVTK 3RZDK 3GTMK 3M4OC 4A93C 4Y7NK 3FKIC 1Y1WC 4OIQA 4YFXA 3HOZC 1K83K 4C3IC 4C3JC 4A3MC 4A3BK 1TWHK 4C3HC 3S17C 4G7ZA 3S16K 2YU9K 2PMZD 2JA6K 4KN4A 4QIWL 4LJZA 3HOUK 5TMCA 1I6VA 2A6HA 3S1QC 4GZYA 4A3KK 2JA5K 5C44K 3GTLK 4OIOA 3EQLA 1YNJA 4XLNA 1Y1VK 4KMUA 4AYBD 2JA8C 2WAQL 5M5WK 5C4XC 5IYDK 1XPPA 3H0GK 2NVXC 4MQ9A 3HOWK 3HOYK 1SFOK 3GTKC 4Y52C 1I3QC 4QIWD 2NVYK 4A3JC 3K7AK 5IP7C 1I6HC 4BXXK 4YFNA 4BBRK 4YFKA 5IYCK 4MEYA 2E2JK 2JA7K 3GTJK 3HKZL 3GTQK 3S1NK 4BY7K 2WAQD 5C4JK 2NVQK 3S14C 4A3FC 3GTGC 2WB1L 4OIPA 3GTPK 4MEXA 4X6AC 2R92C 5M5YK 3S1NC 2NVTC 2O5IA 3RZDC 3GTMC 4Y7NC 5IYBK 5C4JC 3HOVK 2PPBA 3S15K 4A3BC 4A3DK 1K83C 2Y0SD 3WODA 2BE5A 1TWFK 1TWHC 3PO2K 3HOXK 4G7OA 4LK0A 3S16C 1ZYRA 2YU9C 2JA6C 5C3EK 3RZOK 3S2HK 3S2DK 3HKZD 2R7ZK 4LLGA 3HOUC 2JA5C 4A3KC 5FJ8K 1IW7A 2WB1D 5C44C 4A3IK 3GTLC 1R9TK 2E2IK 3GTOK 1Y1VC 1BDFA 1WCMK 4KN7A 5IYDC 5M3MK 2A6EA 3H0GC 4QJVA 3I4MK 3HOWC 3HOYC 3I4NK 4XSZA 4JK1A 1SFOC 1TWCK 4G7HA 4C2MK 2NVYC 3K7AC 4BXXC 4A3EK 4BBRC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3S1R K;  5IYC C;  2E2J C;  2JA7 C;  4BY7 C;  3GTQ C;  3GTJ C;  1TWA K;  4BY1 K;  2E2H K;  2NVQ C;  2VUM K;  3S1M K;  5FLM K;  5IP9 K;  4Q4Z A;  3GTP C;  4NOI A;  1I50 K;  4A3L K;  3HOV C;  5IYB C;  3S15 C;  3PO3 K;  4ZH4 A;  4A3D C;  5IP9 C;  2B63 K;  3M3Y K;  1TWF C;  3PO2 C;  4A3C K;  3HOX C;  2R93 K;  3RZO C;  5M3F K;  3M4O K;  5C3E C;  3S2H C;  3FKI K;  4A93 K;  3S2D C;  3HOZ K;  2R7Z C;  4C3I K;  4C3J K;  1YNN A;  4A3M K;  2A68 A;  5TMF A;  1TWG K;  2E2I C;  4C3H K;  4XLP A;  4A3I C;  1R9T C;  3GTO C;  2O5J A;  4AYB L;  2A69 A;  3DXJ A;  3S17 K;  2PA8 L;  4Q5S A;  5M5X K;  1WCM C;  1TWG C;  2CW0 A;  3S1Q K;  5D4D A;  3I4M C;  3I4N C;  1HQM A;  1TWC C;  3CQZ K;  2JA8 K;  4C2M C;  5C4X K;  4A3G K;  3H3V L;  2NVX K;  4A3E C;  1SMY A;  3S1R C;  3GTK K;  4YG2 A;  4LK1 A;  3CQZ C;  1TWA C;  4BY1 C;  4Y52 K;  2PA8 D;  2E2H C;  4A3G C;  1I3Q K;  4XSX A;  2VUM C;  4A3J K;  3S1M C;  5IP7 K;  5FLM C;  1I6H K;  1I50 C;  4BBS K;  2PMZ L;  4A3L C;  4OIN A;  2Y0S L;  3PO3 C;  4OIR A;  2B63 C;  1Y1W K;  3S14 K;  4A3F K;  4BBS C;  3M3Y C;  4QJV B;  3H3V D;  4A3C C;  3GTG K;  2R93 C;  2R92 K;  4X6A K;  2NVT K;  3RZD K;  3GTM K;  3M4O C;  4A93 C;  4Y7N K;  3FKI C;  1Y1W C;  4OIQ A;  4YFX A;  3HOZ C;  1K83 K;  4C3I C;  4C3J C;  4A3M C;  4A3B K;  1TWH K;  4C3H C;  3S17 C;  4G7Z A;  3S16 K;  2YU9 K;  2PMZ D;  2JA6 K;  4KN4 A;  4QIW L;  4LJZ A;  3HOU K;  5TMC A;  1I6V A;  2A6H A;  3S1Q C;  4GZY A;  4A3K K;  2JA5 K;  5C44 K;  3GTL K;  4OIO A;  3EQL A;  1YNJ A;  4XLN A;  1Y1V K;  4KMU A;  4AYB D;  2JA8 C;  2WAQ L;  5M5W K;  5C4X C;  5IYD K;  1XPP A;  3H0G K;  2NVX C;  4MQ9 A;  3HOW K;  3HOY K;  1SFO K;  3GTK C;  4Y52 C;  1I3Q C;  4QIW D;  2NVY K;  4A3J C;  3K7A K;  5IP7 C;  1I6H C;  4BXX K;  4YFN A;  4BBR K;  4YFK A;  5IYC K;  4MEY A;  2E2J K;  2JA7 K;  3GTJ K;  3HKZ L;  3GTQ K;  3S1N K;  4BY7 K;  2WAQ D;  5C4J K;  2NVQ K;  3S14 C;  4A3F C;  3GTG C;  2WB1 L;  4OIP A;  3GTP K;  4MEX A;  4X6A C;  2R92 C;  5M5Y K;  3S1N C;  2NVT C;  2O5I A;  3RZD C;  3GTM C;  4Y7N C;  5IYB K;  5C4J C;  3HOV K;  2PPB A;  3S15 K;  4A3B C;  4A3D K;  1K83 C;  2Y0S D;  3WOD A;  2BE5 A;  1TWF K;  1TWH C;  3PO2 K;  3HOX K;  4G7O A;  4LK0 A;  3S16 C;  1ZYR A;  2YU9 C;  2JA6 C;  5C3E K;  3RZO K;  3S2H K;  3S2D K;  3HKZ D;  2R7Z K;  4LLG A;  3HOU C;  2JA5 C;  4A3K C;  5FJ8 K;  1IW7 A;  2WB1 D;  5C44 C;  4A3I K;  3GTL C;  1R9T K;  2E2I K;  3GTO K;  1Y1V C;  1BDF A;  1WCM K;  4KN7 A;  5IYD C;  5M3M K;  2A6E A;  3H0G C;  4QJV A;  3I4M K;  3HOW C;  3HOY C;  3I4N K;  4XSZ A;  4JK1 A;  1SFO C;  1TWC K;  4G7H A;  4C2M K;  2NVY C;  3K7A C;  4BXX C;  4A3E K;  4BBR C; 
#chains in the Genus database with same CATH topology
 3S1R K;  5IYC C;  4M1X A;  5TJ3 A;  2NVQ C;  1Y1V A;  3T00 A;  3AD9 C;  5FLM K;  5E68 A;  2ZJR S;  2FQT A;  3S15 C;  1O27 A;  1SFO A;  2B63 K;  4LR2 A;  1TWF C;  1DCH A;  2R93 K;  1JVI A;  3M4O K;  3S2H C;  3FKI K;  1ISE A;  3GSI A;  4A3M K;  5TMF A;  2O5J A;  2A69 A;  3GTP A;  4Q5S A;  3PIP S;  1WSV A;  4LQY A;  2GSO A;  1TWC C;  3CQZ K;  2XCO A;  1PJ7 A;  3BP8 C;  3L4K A;  3LPX A;  3BP3 A;  4YG2 A;  4BY1 C;  3G4A A;  4Y52 K;  2PA8 D;  2ZUF A;  5IP7 K;  2P5M A;  1TWG A;  1FEU A;  4BBS K;  4A3L C;  3PO3 C;  4OIR A;  5JFE A;  1Y1W K;  3M3Y C;  4QJV B;  2R92 K;  2NVT K;  1EFW A;  3HOZ C;  4BKW A;  1WQF A;  4C3J C;  3TFI A;  3SZZ A;  3LAP A;  1J6V A;  3S17 C;  3S16 K;  4QIW L;  1GE9 A;  5TMC A;  2B63 A;  2RH6 A;  4XLN A;  2R93 A;  4KMA A;  4WJ3 M;  5IYD K;  3FKI A;  3H0G K;  2NVX C;  3PIO S;  1VH2 A;  1F7U A;  1C0A A;  1O28 A;  1B4A A;  1I6H C;  1X31 C;  4BBR K;  1TWH A;  5CHP A;  5IYC K;  2NVQ K;  3GTG C;  1WIH A;  2WB1 L;  2JA5 A;  1XXC A;  3RZD C;  4Y7N C;  4KM9 A;  3S15 K;  3HXA A;  1K83 C;  3AH5 A;  2BE5 A;  1TWF K;  1TWH C;  1XZQ A;  4GTE A;  2JA6 C;  3S2H K;  3HKZ D;  1XXB A;  4LLG A;  3BUE A;  2JA5 C;  3SZY A;  4A3K C;  1IE0 A;  3FOE A;  1ZVU A;  2R92 A;  5M3M K;  2GAH C;  3HOY C;  1TWC K;  4G7H A;  3MML B;  4BXX C;  2P8T A;  2JA7 C;  3GTJ C;  4BY1 K;  4GTA A;  4WF9 S;  5IP9 K;  4NOI A;  2EBB A;  3H0G A;  4A3L K;  3HOV C;  2L3U A;  3PO3 K;  4ZH4 A;  5EGE A;  4A3D C;  1F9N A;  3M3Y K;  1DCP A;  2KXY A;  5C3E C;  3HOZ K;  2R7Z C;  4C3J K;  1YNN A;  1ZQ1 C;  2JH3 A;  1TWG K;  2E2I C;  3S17 K;  3GEI A;  1R9T C;  3GTO C;  4KMH A;  1F7V A;  1WCM C;  2ZJQ S;  5D4D A;  1EH1 A;  4GTD A;  4WJ4 A;  1TWF A;  3T02 A;  5JVH S;  3H3V L;  4KAW X;  2NVX K;  4LK1 A;  2V6S A;  2E2H C;  4A3G C;  4KC6 A;  3FHZ A;  2VUM C;  3ORE A;  1I6H K;  1I50 C;  4OIN A;  1TWC A;  3VA7 A;  3GTG K;  4A3C C;  3V4G A;  3RZD K;  4Y7N K;  4A93 C;  1K83 K;  4C3I C;  4KM8 A;  3AQP A;  4GTC A;  3NUH A;  1TWH K;  4C3H C;  5IOQ A;  4G7Z A;  2PMZ D;  2JA6 K;  4KN4 A;  3A8J A;  4WCE S;  1I6V A;  2A6H A;  4GZY A;  3N0B A;  4A3K K;  2JA5 K;  4OIO A;  4AYB D;  4U67 S;  2JA8 C;  5C4X C;  1XPP A;  2FQO A;  3HOY K;  2KQ1 A;  3GTK C;  1UV7 A;  1O2A A;  4A3J C;  4BXX K;  4YFN A;  2JA7 K;  3L4J A;  3IPJ A;  3GTJ K;  1WQH A;  2WAQ D;  1AB4 A;  5C4J K;  5DM6 S;  4ILD A;  4A3F C;  4OIP A;  1J6X A;  4IO9 S;  4X6A C;  3S1N C;  2O5I A;  2NVX A;  3HOV K;  1WQG A;  2PPB A;  4IOA S;  1O2B A;  4A3D K;  2Y0S D;  1VRQ C;  4G7O A;  4BLB A;  2YU9 C;  1DCO A;  5C3E K;  2CFA B;  2R7Z K;  2E2I K;  1R9T K;  3GTL C;  4FM9 A;  1IL2 A;  3GTO K;  3GTG A;  1F93 A;  1XXA A;  3AQO A;  1DD5 A;  1WCM K;  4QJV A;  3HOW C;  1K83 A;  3G4C A;  4G0U A;  5EGH A;  2D6F C;  2NVY C;  5DM7 S;  2JA6 A;  3ERE D;  5JVO A;  1WOR A;  3GTQ C;  1J98 A;  4WFA S;  2E2H K;  3OEP A;  1EQR A;  2VUM K;  2W7V A;  1WOS A;  1O24 A;  1I50 K;  3LYW A;  3AD8 C;  3DLL S;  4A3C K;  3HOX C;  3RZO C;  4A93 K;  2JA7 A;  4C3I K;  3GTJ A;  2A68 A;  4C3H K;  4XLP A;  4A3I C;  4AYB L;  5HQH A;  3S0X A;  2PA8 L;  1L0W A;  1INN A;  1HQM A;  1JQW A;  2JA8 K;  5C4X K;  1O25 A;  3A8K A;  2R7Z A;  4A3E C;  1SMY A;  2GAG C;  3GTK K;  1V5V A;  3CQZ C;  4IOC S;  4GFQ A;  1TWA C;  1JOE A;  2PHC B;  3GIR A;  1R9T A;  3GTO A;  2E2I A;  4A3J K;  3S1M C;  1WCM A;  2ZJP S;  2XCQ A;  2Y0S L;  1WOP A;  4A3F K;  4BBS C;  4X6A K;  4XCH A;  3FOF A;  1VLO A;  1Y1W C;  4OIQ A;  4YFX A;  2E2H A;  2VUM A;  2YU9 K;  1I50 A;  4LJZ A;  4GTF A;  3S1Q C;  2GSN A;  3CF5 S;  3GEH A;  4KB2 A;  3GTL K;  3A8I A;  1YNJ A;  1VGX A;  4KMU A;  5M5W K;  3HOW K;  4BLA A;  1I3Q C;  4QIW D;  2NVY K;  3GEE A;  3OPF A;  4RMF A;  3GTQ K;  3HKZ L;  4KAR A;  5IOT A;  3S14 C;  1J6W A;  4MEX A;  1G51 A;  3GTM C;  1O29 A;  3GTK A;  4A3B C;  4J3N A;  1BGW A;  4KB4 A;  1B4B A;  3HOX K;  5HL7 S;  1O26 A;  3RZO K;  1YX2 A;  3N0C A;  2Y3P A;  4KMD A;  3HOU C;  2WB1 D;  5C44 C;  4A3I K;  2L5N A;  1Y1V C;  4FZB A;  4O2D A;  2ZUE A;  4GT9 A;  1SFO C;  1XZP B;  2YU9 A;  3K7A C;  1USM A;  4A3E K;  2E2J C;  4BY7 C;  1TWA K;  3GTL A;  2V6T A;  4LOW A;  3S1M K;  4Q4Z A;  3GTP C;  5IOR A;  1VJE A;  1O2F B;  5IYB C;  2XCR B;  5IP9 C;  4WIL A;  3PO2 C;  1ZXO A;  1KQ4 A;  2NVY A;  4AH6 A;  5M3F K;  3S2D C;  1EI6 A;  3GTQ A;  1IBA A;  1XZP A;  1ZBS A;  3DXJ A;  3LAJ A;  5M5X K;  4WFN S;  1BS2 A;  1TWG C;  2CW0 A;  3S1Q K;  3I4N C;  3I4M C;  2KPU A;  3T01 A;  3TFH A;  4WFB S;  4GTL A;  4C2M C;  3GDZ A;  4A3G K;  1YCL A;  1HI9 A;  3S1R C;  2GSU A;  5HL8 A;  1XZQ B;  4KAT A;  5JVG S;  2CFA A;  1I3Q K;  4XSX A;  5FLM C;  3Q3Q A;  2PMZ L;  3ADA C;  2B63 C;  3S14 K;  3H3V D;  1PJ5 A;  2R93 C;  3GTM K;  3M4O C;  5IOS A;  3FKI C;  4PAB A;  2RGR A;  4A3B K;  3CQZ A;  4KAS A;  4A3M C;  1TWA A;  1USO A;  4P5B A;  1IQ0 A;  1BJT A;  1WOO A;  3QX3 A;  3HOU K;  1RU0 A;  5C44 K;  5CJ9 A;  1IS1 A;  3EQL A;  2WAQ L;  1Y1V K;  1Y1W A;  4MQ9 A;  1SFO K;  2KWA A;  4Y52 C;  1EK8 A;  2V6U A;  3K7A K;  5IP7 C;  4KDD A;  5L46 A;  4YFK A;  2E2J K;  4MEY A;  4BY7 K;  3S1N K;  1WSR A;  2ZFZ A;  4P5A A;  3GTP K;  5FJ8 K;  2R92 C;  5M5Y K;  2NVT C;  4P9S A;  5C4J C;  5IYB K;  3WOD A;  3AD7 C;  4C45 A;  3N3Y A;  1I3Q A;  3PO2 K;  4GTB A;  4LK0 A;  3S16 C;  1ZYR A;  3S2D K;  3JST A;  3TFJ A;  1IW7 A;  3TTG A;  4PAA A;  1BDF A;  1PJ6 A;  3GTM A;  3CAG A;  4KN7 A;  5IYD C;  2A6E A;  3H0G C;  3I4N K;  4G0V A;  3I4M K;  4XSZ A;  4JK1 A;  4DDQ A;  4C2M K;  4G0W A;  4BBR C; 
#chains in the Genus database with same CATH homology
 3S1R K;  5IYC C;  2E2J C;  2JA7 C;  4BY7 C;  3GTQ C;  3GTJ C;  1TWA K;  4BY1 K;  2E2H K;  2NVQ C;  2VUM K;  3S1M K;  5FLM K;  5IP9 K;  4Q4Z A;  3GTP C;  4NOI A;  1I50 K;  4A3L K;  3HOV C;  5IYB C;  3S15 C;  3PO3 K;  4ZH4 A;  4A3D C;  5IP9 C;  2B63 K;  3M3Y K;  1TWF C;  3PO2 C;  4A3C K;  3HOX C;  2R93 K;  3RZO C;  5M3F K;  3M4O K;  5C3E C;  3S2H C;  3FKI K;  4A93 K;  3S2D C;  3HOZ K;  2R7Z C;  4C3I K;  4C3J K;  1YNN A;  4A3M K;  2A68 A;  5TMF A;  1TWG K;  2E2I C;  4C3H K;  4XLP A;  4A3I C;  1R9T C;  3GTO C;  2O5J A;  4AYB L;  2A69 A;  3DXJ A;  3S17 K;  2PA8 L;  4Q5S A;  5M5X K;  1WCM C;  1TWG C;  2CW0 A;  3S1Q K;  5D4D A;  3I4M C;  3I4N C;  1HQM A;  1TWC C;  3CQZ K;  2JA8 K;  4C2M C;  5C4X K;  4A3G K;  3H3V L;  2NVX K;  4A3E C;  1SMY A;  3S1R C;  3GTK K;  4YG2 A;  4LK1 A;  3CQZ C;  1TWA C;  4BY1 C;  4Y52 K;  2PA8 D;  2E2H C;  4A3G C;  1I3Q K;  4XSX A;  2VUM C;  4A3J K;  3S1M C;  5IP7 K;  5FLM C;  1I6H K;  1I50 C;  4BBS K;  2PMZ L;  4A3L C;  4OIN A;  2Y0S L;  3PO3 C;  4OIR A;  2B63 C;  1Y1W K;  3S14 K;  4A3F K;  4BBS C;  3M3Y C;  4QJV B;  3H3V D;  4A3C C;  3GTG K;  2R93 C;  2R92 K;  4X6A K;  2NVT K;  3RZD K;  3GTM K;  3M4O C;  4A93 C;  4Y7N K;  3FKI C;  1Y1W C;  4OIQ A;  4YFX A;  3HOZ C;  1K83 K;  4C3I C;  4C3J C;  4A3M C;  4A3B K;  1TWH K;  4C3H C;  3S17 C;  4G7Z A;  3S16 K;  2YU9 K;  2PMZ D;  2JA6 K;  4KN4 A;  4QIW L;  4LJZ A;  3HOU K;  5TMC A;  1I6V A;  2A6H A;  3S1Q C;  4GZY A;  4A3K K;  2JA5 K;  5C44 K;  3GTL K;  4OIO A;  3EQL A;  1YNJ A;  4XLN A;  1Y1V K;  4KMU A;  4AYB D;  2JA8 C;  2WAQ L;  5M5W K;  5C4X C;  5IYD K;  1XPP A;  3H0G K;  2NVX C;  4MQ9 A;  3HOW K;  3HOY K;  1SFO K;  3GTK C;  4Y52 C;  1I3Q C;  4QIW D;  2NVY K;  4A3J C;  3K7A K;  5IP7 C;  1I6H C;  4BXX K;  4YFN A;  4BBR K;  4YFK A;  5IYC K;  4MEY A;  2E2J K;  2JA7 K;  3GTJ K;  3HKZ L;  3GTQ K;  3S1N K;  4BY7 K;  2WAQ D;  5C4J K;  2NVQ K;  3S14 C;  4A3F C;  3GTG C;  2WB1 L;  4OIP A;  3GTP K;  4MEX A;  4X6A C;  2R92 C;  5M5Y K;  3S1N C;  2NVT C;  2O5I A;  3RZD C;  3GTM C;  4Y7N C;  5IYB K;  5C4J C;  3HOV K;  2PPB A;  3S15 K;  4A3B C;  4A3D K;  1K83 C;  2Y0S D;  3WOD A;  2BE5 A;  1TWF K;  1TWH C;  3PO2 K;  3HOX K;  4G7O A;  4LK0 A;  3S16 C;  1ZYR A;  2YU9 C;  2JA6 C;  5C3E K;  3RZO K;  3S2H K;  3S2D K;  3HKZ D;  2R7Z K;  4LLG A;  3HOU C;  2JA5 C;  4A3K C;  5FJ8 K;  1IW7 A;  2WB1 D;  5C44 C;  4A3I K;  3GTL C;  1R9T K;  2E2I K;  3GTO K;  1Y1V C;  1BDF A;  1WCM K;  4KN7 A;  5IYD C;  5M3M K;  2A6E A;  3H0G C;  4QJV A;  3I4M K;  3HOW C;  3HOY C;  3I4N K;  4XSZ A;  4JK1 A;  1SFO C;  1TWC K;  4G7H A;  4C2M K;  2NVY C;  3K7A C;  4BXX C;  4A3E K;  4BBR C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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