1SFOC

Rna polymerase ii strand separated elongation complex
Total Genus 45
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
45
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords RNA STRAND
publication title Structural Basis of Transcription: Separation of RNA from DNA by RNA Polymerase II
pubmed doi rcsb
molecule tags Transcription/dna-rna hybrid
total genus 45
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2004-02-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 1sfoC01
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 1sfoC02
4A3KC 2E2JC 2NVQC 2JA6C 4BY7C 1TWGC 4C3IC 4C3HK 4BBSK 5IYDK 4YG2A 4C3HC 4Y7NK 4OIQA 4BBSC 5IYDC 3M3YK 4C2MK 4XSZA 5IP9K 3I4MC 3WODA 3S1NK 1ZYRA 3S2HK 4A3BK 4Y7NC 3GTJK 2E2IK 4A3LK 4Y52K 4BY1K 4C2MC 5IP9C 3S1NC 4X6AK 3S2HC 4A3BC 3GTJC 2E2IC 4A3LC 4Y52C 4BY1C 2PPBA 3K7AK 5C44K 4X6AC 2NVXK 3S15K 2A68A 3HKZL 3K7AC 5C44C 3GTPK 4YFKA 5IYCK 3S14K 2BE5A 5M3MK 1I50K 4GZYA 2PMZD 1R9TK 3H0GK 2JA7K 3GTPC 3S14C 5IYCC 3FKIC 4XLNA 3RZDK 1TWHK 1I50C 4LK0A 3S1QK 2JA5K 1R9TC 3H0GC 2JA7C 2Y0SL 5C4XK 3RZDC 1HQMA 1TWHC 3I4MK 3S1QC 2JA5C 1I6VA 1SMYA 2Y0SD 1K83K 5M5XK 3GTOK 5C4XC 4XLPA 2VUMK 1K83C 4JK1A 1BDFA 2O5IA 3GTOC 4A3IK 3GTQK 5M3FK 4A3DK 2A69A 4OINA 2VUMC 2B63K 3H3VL 2NVYK 3HOVK 3HOWK 2WB1L 4A3IC 3GTQC 3I4NK 3HOYK 1I6HK 4A3DC 4OIPA 4Q5SA 1TWCK 3HOVC 2B63C 3PO3C 4OIOA 2NVYC 3S15C 3HOWC 2WB1D 3I4NC 4A3GC 1I6HC 3HOYC 4QIWL 3S1MK 2A6EA 1TWCC 3FKIK 3EQLA 4A3MC 4QJVA 5TMCA 3S2DK 3HKZD 5IYBK 2R93K 2O5JA 4KN7A 4QIWD 5M5WK 3S1MC 4A3CK 4BY7K 4BXXC 4BBRC 3S2DC 4MEYA 5IYBC 4MEXA 2R93C 2R92K 3GTKK 2PA8L 5C4JK 4A3CC 4G7HA 3PO2K 4C3JK 3GTKC 2R92C 1TWAK 4QJVB 1SFOK 2PA8D 5C4JC 3PO2C 4C3JC 2NVTK 1SFOC 1TWAC 5FJ8K 4AYBL 4KN4A 2A6HA 2CW0A 4MQ9A 2NVTC 4A3EK 4KMUA 2WAQL 4LLGA 4ZH4A 3M4OK 4A3GK 1YNNA 5C3EK 1WCMK 2JA8K 4A3EC 2WAQD 4Q4ZA 3H3VD 3M4OC 3DXJA 5C3EC 1WCMC 2YU9K 2JA8C 5FLMK 4XSXA 1TWFK 4BXXK 4BBRK 1XPPA 3HOXK 4LJZA 4G7OA 3S17K 5M5YK 2YU9C 4A3FK 5FLMC 4A3MK 1TWFC 3GTLK 4LK1A 3GTGK 2R7ZK 1I3QK 3HOXC 3S17C 5D4DA 3CQZK 4A3FC 5TMFA 3S1RK 3GTLC 3PO3K 5IP7K 2R7ZC 3GTGC 1I3QC 2E2HK 3M3YC 4YFXA 3CQZC 3HOZK 3GTMK 3S1RC 3RZOK 4NOIA 5IP7C 2E2HC 3HOUK 4A3JK 4YFNA 1IW7A 3HOZC 4A93K 3GTMC 3RZOC 3S16K 4G7ZA 3HOUC 4A3JC 1Y1VK 1Y1WK 2PMZL 4AYBD 4A3KK 4A93C 2E2JK 3S16C 2NVQK 2NVXC 2JA6K 1Y1WC 4OIRA 1Y1VC 1YNJA 1TWGK 4C3IK
chains in the Genus database with same CATH superfamily
2ZUFA 3G4CA 4BLBA 1IQ0A 4C3HK 4GTLA 5TJ3A 1J6XA 4YG2A 3PIOS 4OIQA 4BBSC 1O29A 5IP9K 2RH6A 1ZYRA 3LAPA 3S1NK 3GTJK 4X6AK 5E68A 1O24A 4Y52C 4KDDA 5C44C 3S14K 4YFKA 1FEUA 1I50K 3N3YA 3LYWA 3Q3QA 3T00A 3H0GK 1IS1A 1WSVA 3BUEA 5IYCC 4XLNA 4GTBA 1J98A 4ILDA 2ZJRS 2JA5K 2JA7A 2JA7C 2Y0SL 1WOPA 3I4MK 2L5NA 2Y0SD 2KQ1A 2V6TA 2GSUA 4XLPA 1J6WA 1DCPA 1O25A 4A3IK 3GTQK 3TFIA 2A69A 2VUMC 3FOEA 3HOWK 1XXAA 1WIHA 4WFNS 4KMDA 4WFAS 2B63C 3S15C 4OIOA 4A3GC 4LR2A 3HOYC 2V6SA 3HKZD 3GTPA 4KN7A 1R9TA 3AD9C 5C4JK 4A3CC 2GSNA 3PO2K 1BS2A 2R92A 5HQHA 2R92C 4PABA 3L4KA 3GSIA 1SFOA 4C3JC 3GEEA 1SFOC 2NVTK 3JSTA 2GAGC 4KB2A 4A3EC 5HL8A 3V4GA 1TWCA 5C3EC 1WCMC 4M1XA 2JH3A 4LJZA 4G7OA 5IOSA 1XZPA 2YU9C 4J3NA 5FLMC 1TWFC 2R7ZK 5D4DA 4FM9A 3PIPS 4A3FC 3GTGA 3GTLC 5HL7S 3GTGC 5EGEA 4YFXA 3OPFA 1J6VA 3S1RC 1XZPB 1AB4A 4GTFA 1USOA 4G7ZA 3HOUC 3T01A 4IOCS 2E2JK 3S16C 2NVQK 5L46A 3SZYA 4C3IC 4WCES 5IYDK 3VA7A 1F7UA 3M3YK 4C2MK 3A8JA 3I4MC 5JFEA 4DDQA 4Y7NC 2GAHC 3S2HC 4A3BC 2E2IA 2E2IC 4A3LC 4BY1C 2PPBA 1JVIA 3K7AK 3LPXA 4KASA 2XCOA 3AD7C 3GTPK 2NVXA 4GZYA 2PMZD 1R9TK 1JOEA 3RZDK 5C4XK 1TWHA 1O27A 3L4JA 1TWHC 1DCHA 3S1QC 1I6VA 1SMYA 1K83K 1V5VA 3ADAC 4JK1A 1BDFA 2O5IA 3GTOC 1WOSA 4A3DK 3HOVK 1I6HK 1TWCK 2NVYA 3PO3C 2KPUA 2NVYC 3I4NC 3OEPA 3S1MK 3FKIK 1GE9A 3EQLA 4A3MC 2W7VA 5IYBK 4WFBS 2O5JA 5M5WK 3CF5S 4BY7K 3S2DC 3GTKK 2R93C 1L0WA 1F93A 1TWAA 1TWAC 5FJ8K 2FQTA 4AYBL 4KN4A 1VJEA 4MQ9A 2VUMA 4LLGA 1JQWA 4GT9A 3M4OK 2B63A 4GTCA 2V6UA 3DXJA 3FOFA 4G0WA 2JA8C 4BBRK 1XPPA 1WOOA 4GTEA 4LK1A 3HOXC 3S17C 3BP8C 2CFAA 5TMFA 5CHPA 4WF9S 1VLOA 5IP7K 1I3QA 1I3QC 1EQRA 3CQZA 3M3YC 1B4BA 3HOZK 3CQZC 1O28A 4BLAA 4NOIA 2E2HC 1YX2A 4A3JK 4YFNA 1IW7A 3GTMA 4A93K 3GTMC 3RZOC 2CFAB 1Y1VK 1WQHA 1VGXA 1F7VA 4P9SA 1Y1WA 1Y1WC 4OIRA 3FHZA 2ZUEA 4A3KC 1WCMA 2JA6C 1G51A 4BY7C 1TWGC 4BBSK 1EFWA 2YU9A 1TWFA 3T02A 4C3HC 3GTLA 3ERED 5JVOA 4Y52K 5IP9C 3DLLS 1WQFA 3S1NC 3QX3A 2XCRB 3GTJC 5C44K 4X6AC 1EK8A 1XZQA 3TTGA 4GTAA 1ZQ1C 5IYCK 2BE5A 5M3MK 4KAWX 2JA7K 2ZFZA 3S14C 1WSRA 3FKIC 4U67S 1I50C 4LK0A 1IE0A 3H0GC 1XZQB 1ISEA 4P5AA 1HQMA 2JA5C 1USMA 2VUMK 3AQOA 5M3FK 4OINA 2B63K 3H3VL 3S15K 4A3GK 4A3IC 3GTQC 3HOYK 4OIPA 3HXAA 3HOWC 4QIWL 3OREA 4QJVA 5TMCA 4QIWD 2KWAA 4A3CK 4BBRC 4MEYA 1F9NA 4MEXA 1O2BA 1O2AA 3AQPA 4G0VA 2R92K 4KMHA 3AD8C 1XXBA 4C3JK 1SFOK 4QJVB 5C4JC 4LOWA 3PO2C 4KB4A 4XCHA 3GTOA 2CW0A 2P5MA 2NVTC 4A3EK 4ZH4A 3A8KA 5C3EK 1WCMK 2EBBA 4LQYA 4KATA 3CAGA 5CJ9A 2D6FC 4KM8A 2L3UA 1B4AA 4BKWA 2YU9K 5FLMK 4BXXK 1TWFK 2Y3PA 1WQGA 4A3FK 5IORA 3GTLK 2R93A 3GTGK 1BJTA 1EH1A 3S1RK 2R7ZA 2R7ZC 3GEHA 1UV7A 4KMAA 3HOUK 1ZXOA 3GEIA 2PHCB 3S16K 1VH2A 2P8TA 4AYBD 4WJ4A 2GSOA 1YNJA 4C3IK 2E2JC 1IBAA 2NVQC 3N0CA 5DM6S 4Y7NK 4GTDA 5IYDC 4XSZA 3WODA 4O2DA 3S2HK 4A3BK 2E2IK 4A3LK 1ZBSA 4BY1K 4C2MC 4IOAS 2E2HA 5JVHS 5IOTA 2KXYA 3SZZA 2NVXK 2A68A 2XCQA 3HKZL 3K7AC 4G0UA 4KC6A 4IO9S 1ZVUA 3GDZA 4PAAA 3GTPC 1YCLA 2JA6A 1TWHK 1TWGA 3S1QK 2FQOA 1R9TC 3RZDC 4FZBA 2ZJPS 1EI6A 3MMLB 5M5XK 3GTOK 5C4XC 1K83A 1K83C 2ZJQS 1X31C 4KM9A 5IOQA 4C45A 3GTJA 4WJ3M 3PO3K 2NVYK 2WB1L 3I4NK 4A3DC 4Q5SA 1KQ4A 3A8IA 4AH6A 3HOVC 4A3MK 1IL2A 1I6HC 1C0AA 2WB1D 4WILA 1RU0A 3TFJA 2A6EA 1TWCC 1DCOA 3S2DK 2R93K 1XXCA 1PJ7A 3FKIA 3S1MC 1I50A 5JVGS 4BXXC 5EGHA 3H0GA 5IYBC 1HI9A 3G4AA 3S0XA 2PA8L 2RGRA 4G7HA 3GTKA 2JA5A 3GTKC 1TWAK 4P5BA 1VRQC 2PA8D 4RMFA 2A6HA 1PJ6A 1PJ5A 4KMUA 2WAQL 3TFHA 1INNA 3GTQA 1YNNA 3BP3A 3IPJA 2JA8K 2WAQD 4Q4ZA 3H3VD 3M4OC 1WORA 3NUHA 1O2FB 4XSXA 3HOXK 3S17K 5M5YK 1I3QK 3CQZK 5DM7S 1DD5A 2E2HK 3GTMK 3RZOK 5IP7C 4GFQA 4KARA 1BGWA 3GIRA 3HOZC 3AH5A 1Y1WK 4A3JC 2PMZL 4A3KK 3LAJA 4A93C 1O26A 1Y1VA 2NVXC 3N0BA 2JA6K 1Y1VC 1TWGK
chains in the Genus database with same CATH topology
4A3KC 2E2JC 2NVQC 2JA6C 4BY7C 1TWGC 4C3IC 4C3HK 4BBSK 5IYDK 4YG2A 4C3HC 4Y7NK 4OIQA 4BBSC 5IYDC 3M3YK 4C2MK 4XSZA 5IP9K 3I4MC 3WODA 3S1NK 1ZYRA 3S2HK 4A3BK 4Y7NC 3GTJK 2E2IK 4A3LK 4Y52K 4BY1K 4C2MC 5IP9C 3S1NC 4X6AK 3S2HC 4A3BC 3GTJC 2E2IC 4A3LC 4Y52C 4BY1C 2PPBA 3K7AK 5C44K 4X6AC 2NVXK 3S15K 2A68A 3HKZL 3K7AC 5C44C 3GTPK 4YFKA 5IYCK 3S14K 2BE5A 5M3MK 1I50K 4GZYA 2PMZD 1R9TK 3H0GK 2JA7K 3GTPC 3S14C 5IYCC 3FKIC 4XLNA 3RZDK 1TWHK 1I50C 4LK0A 3S1QK 2JA5K 1R9TC 3H0GC 2JA7C 2Y0SL 5C4XK 3RZDC 1HQMA 1TWHC 3I4MK 3S1QC 2JA5C 1I6VA 1SMYA 2Y0SD 1K83K 5M5XK 3GTOK 5C4XC 4XLPA 2VUMK 1K83C 4JK1A 1BDFA 2O5IA 3GTOC 4A3IK 3GTQK 5M3FK 4A3DK 2A69A 4OINA 2VUMC 2B63K 3H3VL 2NVYK 3HOVK 3HOWK 2WB1L 4A3IC 3GTQC 3I4NK 3HOYK 1I6HK 4A3DC 4OIPA 4Q5SA 1TWCK 3HOVC 2B63C 3PO3C 4OIOA 2NVYC 3S15C 3HOWC 2WB1D 3I4NC 4A3GC 1I6HC 3HOYC 4QIWL 3S1MK 2A6EA 1TWCC 3FKIK 3EQLA 4A3MC 4QJVA 5TMCA 3S2DK 3HKZD 5IYBK 2R93K 2O5JA 4KN7A 4QIWD 5M5WK 3S1MC 4A3CK 4BY7K 4BXXC 4BBRC 3S2DC 4MEYA 5IYBC 4MEXA 2R93C 2R92K 3GTKK 2PA8L 5C4JK 4A3CC 4G7HA 3PO2K 4C3JK 3GTKC 2R92C 1TWAK 4QJVB 1SFOK 2PA8D 5C4JC 3PO2C 4C3JC 2NVTK 1SFOC 1TWAC 5FJ8K 4AYBL 4KN4A 2A6HA 2CW0A 4MQ9A 2NVTC 4A3EK 4KMUA 2WAQL 4LLGA 4ZH4A 3M4OK 4A3GK 1YNNA 5C3EK 1WCMK 2JA8K 4A3EC 2WAQD 4Q4ZA 3H3VD 3M4OC 3DXJA 5C3EC 1WCMC 2YU9K 2JA8C 5FLMK 4XSXA 1TWFK 4BXXK 4BBRK 1XPPA 3HOXK 4LJZA 4G7OA 3S17K 5M5YK 2YU9C 4A3FK 5FLMC 4A3MK 1TWFC 3GTLK 4LK1A 3GTGK 2R7ZK 1I3QK 3HOXC 3S17C 5D4DA 3CQZK 4A3FC 5TMFA 3S1RK 3GTLC 3PO3K 5IP7K 2R7ZC 3GTGC 1I3QC 2E2HK 3M3YC 4YFXA 3CQZC 3HOZK 3GTMK 3S1RC 3RZOK 4NOIA 5IP7C 2E2HC 3HOUK 4A3JK 4YFNA 1IW7A 3HOZC 4A93K 3GTMC 3RZOC 3S16K 4G7ZA 3HOUC 4A3JC 1Y1VK 1Y1WK 2PMZL 4AYBD 4A3KK 4A93C 2E2JK 3S16C 2NVQK 2NVXC 2JA6K 1Y1WC 4OIRA 1Y1VC 1YNJA 1TWGK 4C3IK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4A3K C;  2E2J C;  2NVQ C;  2JA6 C;  4BY7 C;  1TWG C;  4C3I C;  4C3H K;  4BBS K;  5IYD K;  4YG2 A;  4C3H C;  4Y7N K;  4OIQ A;  4BBS C;  5IYD C;  3M3Y K;  4C2M K;  4XSZ A;  5IP9 K;  3I4M C;  3WOD A;  3S1N K;  1ZYR A;  3S2H K;  4A3B K;  4Y7N C;  3GTJ K;  2E2I K;  4A3L K;  4Y52 K;  4BY1 K;  4C2M C;  5IP9 C;  3S1N C;  4X6A K;  3S2H C;  4A3B C;  3GTJ C;  2E2I C;  4A3L C;  4Y52 C;  4BY1 C;  2PPB A;  3K7A K;  5C44 K;  4X6A C;  2NVX K;  3S15 K;  2A68 A;  3HKZ L;  3K7A C;  5C44 C;  3GTP K;  4YFK A;  5IYC K;  3S14 K;  2BE5 A;  5M3M K;  1I50 K;  4GZY A;  2PMZ D;  1R9T K;  3H0G K;  2JA7 K;  3GTP C;  3S14 C;  5IYC C;  3FKI C;  4XLN A;  3RZD K;  1TWH K;  1I50 C;  4LK0 A;  3S1Q K;  2JA5 K;  1R9T C;  3H0G C;  2JA7 C;  2Y0S L;  5C4X K;  3RZD C;  1HQM A;  1TWH C;  3I4M K;  3S1Q C;  2JA5 C;  1I6V A;  1SMY A;  2Y0S D;  1K83 K;  5M5X K;  3GTO K;  5C4X C;  4XLP A;  2VUM K;  1K83 C;  4JK1 A;  1BDF A;  2O5I A;  3GTO C;  4A3I K;  3GTQ K;  5M3F K;  4A3D K;  2A69 A;  4OIN A;  2VUM C;  2B63 K;  3H3V L;  2NVY K;  3HOV K;  3HOW K;  2WB1 L;  4A3I C;  3GTQ C;  3I4N K;  3HOY K;  1I6H K;  4A3D C;  4OIP A;  4Q5S A;  1TWC K;  3HOV C;  2B63 C;  3PO3 C;  4OIO A;  2NVY C;  3S15 C;  3HOW C;  2WB1 D;  3I4N C;  4A3G C;  1I6H C;  3HOY C;  4QIW L;  3S1M K;  2A6E A;  1TWC C;  3FKI K;  3EQL A;  4A3M C;  4QJV A;  5TMC A;  3S2D K;  3HKZ D;  5IYB K;  2R93 K;  2O5J A;  4KN7 A;  4QIW D;  5M5W K;  3S1M C;  4A3C K;  4BY7 K;  4BXX C;  4BBR C;  3S2D C;  4MEY A;  5IYB C;  4MEX A;  2R93 C;  2R92 K;  3GTK K;  2PA8 L;  5C4J K;  4A3C C;  4G7H A;  3PO2 K;  4C3J K;  3GTK C;  2R92 C;  1TWA K;  4QJV B;  1SFO K;  2PA8 D;  5C4J C;  3PO2 C;  4C3J C;  2NVT K;  1SFO C;  1TWA C;  5FJ8 K;  4AYB L;  4KN4 A;  2A6H A;  2CW0 A;  4MQ9 A;  2NVT C;  4A3E K;  4KMU A;  2WAQ L;  4LLG A;  4ZH4 A;  3M4O K;  4A3G K;  1YNN A;  5C3E K;  1WCM K;  2JA8 K;  4A3E C;  2WAQ D;  4Q4Z A;  3H3V D;  3M4O C;  3DXJ A;  5C3E C;  1WCM C;  2YU9 K;  2JA8 C;  5FLM K;  4XSX A;  1TWF K;  4BXX K;  4BBR K;  1XPP A;  3HOX K;  4LJZ A;  4G7O A;  3S17 K;  5M5Y K;  2YU9 C;  4A3F K;  5FLM C;  4A3M K;  1TWF C;  3GTL K;  4LK1 A;  3GTG K;  2R7Z K;  1I3Q K;  3HOX C;  3S17 C;  5D4D A;  3CQZ K;  4A3F C;  5TMF A;  3S1R K;  3GTL C;  3PO3 K;  5IP7 K;  2R7Z C;  3GTG C;  1I3Q C;  2E2H K;  3M3Y C;  4YFX A;  3CQZ C;  3HOZ K;  3GTM K;  3S1R C;  3RZO K;  4NOI A;  5IP7 C;  2E2H C;  3HOU K;  4A3J K;  4YFN A;  1IW7 A;  3HOZ C;  4A93 K;  3GTM C;  3RZO C;  3S16 K;  4G7Z A;  3HOU C;  4A3J C;  1Y1V K;  1Y1W K;  2PMZ L;  4AYB D;  4A3K K;  4A93 C;  2E2J K;  3S16 C;  2NVQ K;  2NVX C;  2JA6 K;  1Y1W C;  4OIR A;  1Y1V C;  1YNJ A;  1TWG K;  4C3I K; 
#chains in the Genus database with same CATH topology
 2ZUF A;  3G4C A;  4BLB A;  1IQ0 A;  4C3H K;  4GTL A;  5TJ3 A;  1J6X A;  4YG2 A;  3PIO S;  4OIQ A;  4BBS C;  1O29 A;  5IP9 K;  2RH6 A;  1ZYR A;  3LAP A;  3S1N K;  3GTJ K;  4X6A K;  5E68 A;  1O24 A;  4Y52 C;  4KDD A;  5C44 C;  3S14 K;  4YFK A;  1FEU A;  1I50 K;  3N3Y A;  3LYW A;  3Q3Q A;  3T00 A;  3H0G K;  1IS1 A;  1WSV A;  3BUE A;  5IYC C;  4XLN A;  4GTB A;  1J98 A;  4ILD A;  2ZJR S;  2JA5 K;  2JA7 A;  2JA7 C;  2Y0S L;  1WOP A;  3I4M K;  2L5N A;  2Y0S D;  2KQ1 A;  2V6T A;  2GSU A;  4XLP A;  1J6W A;  1DCP A;  1O25 A;  4A3I K;  3GTQ K;  3TFI A;  2A69 A;  2VUM C;  3FOE A;  3HOW K;  1XXA A;  1WIH A;  4WFN S;  4KMD A;  4WFA S;  2B63 C;  3S15 C;  4OIO A;  4A3G C;  4LR2 A;  3HOY C;  2V6S A;  3HKZ D;  3GTP A;  4KN7 A;  1R9T A;  3AD9 C;  5C4J K;  4A3C C;  2GSN A;  3PO2 K;  1BS2 A;  2R92 A;  5HQH A;  2R92 C;  4PAB A;  3L4K A;  3GSI A;  1SFO A;  4C3J C;  3GEE A;  1SFO C;  2NVT K;  3JST A;  2GAG C;  4KB2 A;  4A3E C;  5HL8 A;  3V4G A;  1TWC A;  5C3E C;  1WCM C;  4M1X A;  2JH3 A;  4LJZ A;  4G7O A;  5IOS A;  1XZP A;  2YU9 C;  4J3N A;  5FLM C;  1TWF C;  2R7Z K;  5D4D A;  4FM9 A;  3PIP S;  4A3F C;  3GTG A;  3GTL C;  5HL7 S;  3GTG C;  5EGE A;  4YFX A;  3OPF A;  1J6V A;  3S1R C;  1XZP B;  1AB4 A;  4GTF A;  1USO A;  4G7Z A;  3HOU C;  3T01 A;  4IOC S;  2E2J K;  3S16 C;  2NVQ K;  5L46 A;  3SZY A;  4C3I C;  4WCE S;  5IYD K;  3VA7 A;  1F7U A;  3M3Y K;  4C2M K;  3A8J A;  3I4M C;  5JFE A;  4DDQ A;  4Y7N C;  2GAH C;  3S2H C;  4A3B C;  2E2I A;  2E2I C;  4A3L C;  4BY1 C;  2PPB A;  1JVI A;  3K7A K;  3LPX A;  4KAS A;  2XCO A;  3AD7 C;  3GTP K;  2NVX A;  4GZY A;  2PMZ D;  1R9T K;  1JOE A;  3RZD K;  5C4X K;  1TWH A;  1O27 A;  3L4J A;  1TWH C;  1DCH A;  3S1Q C;  1I6V A;  1SMY A;  1K83 K;  1V5V A;  3ADA C;  4JK1 A;  1BDF A;  2O5I A;  3GTO C;  1WOS A;  4A3D K;  3HOV K;  1I6H K;  1TWC K;  2NVY A;  3PO3 C;  2KPU A;  2NVY C;  3I4N C;  3OEP A;  3S1M K;  3FKI K;  1GE9 A;  3EQL A;  4A3M C;  2W7V A;  5IYB K;  4WFB S;  2O5J A;  5M5W K;  3CF5 S;  4BY7 K;  3S2D C;  3GTK K;  2R93 C;  1L0W A;  1F93 A;  1TWA A;  1TWA C;  5FJ8 K;  2FQT A;  4AYB L;  4KN4 A;  1VJE A;  4MQ9 A;  2VUM A;  4LLG A;  1JQW A;  4GT9 A;  3M4O K;  2B63 A;  4GTC A;  2V6U A;  3DXJ A;  3FOF A;  4G0W A;  2JA8 C;  4BBR K;  1XPP A;  1WOO A;  4GTE A;  4LK1 A;  3HOX C;  3S17 C;  3BP8 C;  2CFA A;  5TMF A;  5CHP A;  4WF9 S;  1VLO A;  5IP7 K;  1I3Q A;  1I3Q C;  1EQR A;  3CQZ A;  3M3Y C;  1B4B A;  3HOZ K;  3CQZ C;  1O28 A;  4BLA A;  4NOI A;  2E2H C;  1YX2 A;  4A3J K;  4YFN A;  1IW7 A;  3GTM A;  4A93 K;  3GTM C;  3RZO C;  2CFA B;  1Y1V K;  1WQH A;  1VGX A;  1F7V A;  4P9S A;  1Y1W A;  1Y1W C;  4OIR A;  3FHZ A;  2ZUE A;  4A3K C;  1WCM A;  2JA6 C;  1G51 A;  4BY7 C;  1TWG C;  4BBS K;  1EFW A;  2YU9 A;  1TWF A;  3T02 A;  4C3H C;  3GTL A;  3ERE D;  5JVO A;  4Y52 K;  5IP9 C;  3DLL S;  1WQF A;  3S1N C;  3QX3 A;  2XCR B;  3GTJ C;  5C44 K;  4X6A C;  1EK8 A;  1XZQ A;  3TTG A;  4GTA A;  1ZQ1 C;  5IYC K;  2BE5 A;  5M3M K;  4KAW X;  2JA7 K;  2ZFZ A;  3S14 C;  1WSR A;  3FKI C;  4U67 S;  1I50 C;  4LK0 A;  1IE0 A;  3H0G C;  1XZQ B;  1ISE A;  4P5A A;  1HQM A;  2JA5 C;  1USM A;  2VUM K;  3AQO A;  5M3F K;  4OIN A;  2B63 K;  3H3V L;  3S15 K;  4A3G K;  4A3I C;  3GTQ C;  3HOY K;  4OIP A;  3HXA A;  3HOW C;  4QIW L;  3ORE A;  4QJV A;  5TMC A;  4QIW D;  2KWA A;  4A3C K;  4BBR C;  4MEY A;  1F9N A;  4MEX A;  1O2B A;  1O2A A;  3AQP A;  4G0V A;  2R92 K;  4KMH A;  3AD8 C;  1XXB A;  4C3J K;  1SFO K;  4QJV B;  5C4J C;  4LOW A;  3PO2 C;  4KB4 A;  4XCH A;  3GTO A;  2CW0 A;  2P5M A;  2NVT C;  4A3E K;  4ZH4 A;  3A8K A;  5C3E K;  1WCM K;  2EBB A;  4LQY A;  4KAT A;  3CAG A;  5CJ9 A;  2D6F C;  4KM8 A;  2L3U A;  1B4A A;  4BKW A;  2YU9 K;  5FLM K;  4BXX K;  1TWF K;  2Y3P A;  1WQG A;  4A3F K;  5IOR A;  3GTL K;  2R93 A;  3GTG K;  1BJT A;  1EH1 A;  3S1R K;  2R7Z A;  2R7Z C;  3GEH A;  1UV7 A;  4KMA A;  3HOU K;  1ZXO A;  3GEI A;  2PHC B;  3S16 K;  1VH2 A;  2P8T A;  4AYB D;  4WJ4 A;  2GSO A;  1YNJ A;  4C3I K;  2E2J C;  1IBA A;  2NVQ C;  3N0C A;  5DM6 S;  4Y7N K;  4GTD A;  5IYD C;  4XSZ A;  3WOD A;  4O2D A;  3S2H K;  4A3B K;  2E2I K;  4A3L K;  1ZBS A;  4BY1 K;  4C2M C;  4IOA S;  2E2H A;  5JVH S;  5IOT A;  2KXY A;  3SZZ A;  2NVX K;  2A68 A;  2XCQ A;  3HKZ L;  3K7A C;  4G0U A;  4KC6 A;  4IO9 S;  1ZVU A;  3GDZ A;  4PAA A;  3GTP C;  1YCL A;  2JA6 A;  1TWH K;  1TWG A;  3S1Q K;  2FQO A;  1R9T C;  3RZD C;  4FZB A;  2ZJP S;  1EI6 A;  3MML B;  5M5X K;  3GTO K;  5C4X C;  1K83 A;  1K83 C;  2ZJQ S;  1X31 C;  4KM9 A;  5IOQ A;  4C45 A;  3GTJ A;  4WJ3 M;  3PO3 K;  2NVY K;  2WB1 L;  3I4N K;  4A3D C;  4Q5S A;  1KQ4 A;  3A8I A;  4AH6 A;  3HOV C;  4A3M K;  1IL2 A;  1I6H C;  1C0A A;  2WB1 D;  4WIL A;  1RU0 A;  3TFJ A;  2A6E A;  1TWC C;  1DCO A;  3S2D K;  2R93 K;  1XXC A;  1PJ7 A;  3FKI A;  3S1M C;  1I50 A;  5JVG S;  4BXX C;  5EGH A;  3H0G A;  5IYB C;  1HI9 A;  3G4A A;  3S0X A;  2PA8 L;  2RGR A;  4G7H A;  3GTK A;  2JA5 A;  3GTK C;  1TWA K;  4P5B A;  1VRQ C;  2PA8 D;  4RMF A;  2A6H A;  1PJ6 A;  1PJ5 A;  4KMU A;  2WAQ L;  3TFH A;  1INN A;  3GTQ A;  1YNN A;  3BP3 A;  3IPJ A;  2JA8 K;  2WAQ D;  4Q4Z A;  3H3V D;  3M4O C;  1WOR A;  3NUH A;  1O2F B;  4XSX A;  3HOX K;  3S17 K;  5M5Y K;  1I3Q K;  3CQZ K;  5DM7 S;  1DD5 A;  2E2H K;  3GTM K;  3RZO K;  5IP7 C;  4GFQ A;  4KAR A;  1BGW A;  3GIR A;  3HOZ C;  3AH5 A;  1Y1W K;  4A3J C;  2PMZ L;  4A3K K;  3LAJ A;  4A93 C;  1O26 A;  1Y1V A;  2NVX C;  3N0B A;  2JA6 K;  1Y1V C;  1TWG K; 
#chains in the Genus database with same CATH homology
 4A3K C;  2E2J C;  2NVQ C;  2JA6 C;  4BY7 C;  1TWG C;  4C3I C;  4C3H K;  4BBS K;  5IYD K;  4YG2 A;  4C3H C;  4Y7N K;  4OIQ A;  4BBS C;  5IYD C;  3M3Y K;  4C2M K;  4XSZ A;  5IP9 K;  3I4M C;  3WOD A;  3S1N K;  1ZYR A;  3S2H K;  4A3B K;  4Y7N C;  3GTJ K;  2E2I K;  4A3L K;  4Y52 K;  4BY1 K;  4C2M C;  5IP9 C;  3S1N C;  4X6A K;  3S2H C;  4A3B C;  3GTJ C;  2E2I C;  4A3L C;  4Y52 C;  4BY1 C;  2PPB A;  3K7A K;  5C44 K;  4X6A C;  2NVX K;  3S15 K;  2A68 A;  3HKZ L;  3K7A C;  5C44 C;  3GTP K;  4YFK A;  5IYC K;  3S14 K;  2BE5 A;  5M3M K;  1I50 K;  4GZY A;  2PMZ D;  1R9T K;  3H0G K;  2JA7 K;  3GTP C;  3S14 C;  5IYC C;  3FKI C;  4XLN A;  3RZD K;  1TWH K;  1I50 C;  4LK0 A;  3S1Q K;  2JA5 K;  1R9T C;  3H0G C;  2JA7 C;  2Y0S L;  5C4X K;  3RZD C;  1HQM A;  1TWH C;  3I4M K;  3S1Q C;  2JA5 C;  1I6V A;  1SMY A;  2Y0S D;  1K83 K;  5M5X K;  3GTO K;  5C4X C;  4XLP A;  2VUM K;  1K83 C;  4JK1 A;  1BDF A;  2O5I A;  3GTO C;  4A3I K;  3GTQ K;  5M3F K;  4A3D K;  2A69 A;  4OIN A;  2VUM C;  2B63 K;  3H3V L;  2NVY K;  3HOV K;  3HOW K;  2WB1 L;  4A3I C;  3GTQ C;  3I4N K;  3HOY K;  1I6H K;  4A3D C;  4OIP A;  4Q5S A;  1TWC K;  3HOV C;  2B63 C;  3PO3 C;  4OIO A;  2NVY C;  3S15 C;  3HOW C;  2WB1 D;  3I4N C;  4A3G C;  1I6H C;  3HOY C;  4QIW L;  3S1M K;  2A6E A;  1TWC C;  3FKI K;  3EQL A;  4A3M C;  4QJV A;  5TMC A;  3S2D K;  3HKZ D;  5IYB K;  2R93 K;  2O5J A;  4KN7 A;  4QIW D;  5M5W K;  3S1M C;  4A3C K;  4BY7 K;  4BXX C;  4BBR C;  3S2D C;  4MEY A;  5IYB C;  4MEX A;  2R93 C;  2R92 K;  3GTK K;  2PA8 L;  5C4J K;  4A3C C;  4G7H A;  3PO2 K;  4C3J K;  3GTK C;  2R92 C;  1TWA K;  4QJV B;  1SFO K;  2PA8 D;  5C4J C;  3PO2 C;  4C3J C;  2NVT K;  1SFO C;  1TWA C;  5FJ8 K;  4AYB L;  4KN4 A;  2A6H A;  2CW0 A;  4MQ9 A;  2NVT C;  4A3E K;  4KMU A;  2WAQ L;  4LLG A;  4ZH4 A;  3M4O K;  4A3G K;  1YNN A;  5C3E K;  1WCM K;  2JA8 K;  4A3E C;  2WAQ D;  4Q4Z A;  3H3V D;  3M4O C;  3DXJ A;  5C3E C;  1WCM C;  2YU9 K;  2JA8 C;  5FLM K;  4XSX A;  1TWF K;  4BXX K;  4BBR K;  1XPP A;  3HOX K;  4LJZ A;  4G7O A;  3S17 K;  5M5Y K;  2YU9 C;  4A3F K;  5FLM C;  4A3M K;  1TWF C;  3GTL K;  4LK1 A;  3GTG K;  2R7Z K;  1I3Q K;  3HOX C;  3S17 C;  5D4D A;  3CQZ K;  4A3F C;  5TMF A;  3S1R K;  3GTL C;  3PO3 K;  5IP7 K;  2R7Z C;  3GTG C;  1I3Q C;  2E2H K;  3M3Y C;  4YFX A;  3CQZ C;  3HOZ K;  3GTM K;  3S1R C;  3RZO K;  4NOI A;  5IP7 C;  2E2H C;  3HOU K;  4A3J K;  4YFN A;  1IW7 A;  3HOZ C;  4A93 K;  3GTM C;  3RZO C;  3S16 K;  4G7Z A;  3HOU C;  4A3J C;  1Y1V K;  1Y1W K;  2PMZ L;  4AYB D;  4A3K K;  4A93 C;  2E2J K;  3S16 C;  2NVQ K;  2NVX C;  2JA6 K;  1Y1W C;  4OIR A;  1Y1V C;  1YNJ A;  1TWG K;  4C3I K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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