1SFOC

Rna polymerase ii strand separated elongation complex
Total Genus 45
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
45
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural Basis of Transcription: Separation of RNA from DNA by RNA Polymerase II
pubmed doi rcsb
molecule tags Transcription/dna-rna hybrid
molecule keywords RNA STRAND
total genus 45
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2004-02-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 1sfoC01
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 1sfoC02
3FKIC 1YNNA 3M3YC 2JA7K 3H0GC 4KN4A 3H0GK 4KMUA 4NOIA 3S1QC 4A3EK 4A93K 2NVXC 1TWGK 4A3CK 4BBSK 2E2HC 5IYDK 4OIOA 3PO2K 1TWHK 4ZH4A 3WODA 3M3YK 4G7ZA 5FJ8K 4BY1K 4BY1C 2WAQL 2R92C 1I3QC 2E2IC 3GTPC 2WB1L 3K7AK 4A3JK 5IP7C 3GTPK 5IYBK 2VUMK 2R92K 1HQMA 4A3MK 5M5YK 3S2HK 4A3EC 3S17K 2JA5K 3S1QK 1I6VA 3HOVC 1TWHC 1ZYRA 3HKZD 5IYDC 2R7ZC 3H3VL 1I50K 1K83K 5M5WK 1TWCK 5C4XK 1SFOK 5M3MK 4BBRC 3CQZC 5FLMK 3GTQC 2JA6C 4A3IK 5M3FK 3S1NK 4A3BK 4A3KC 3S17C 3GTGK 4Q4ZA 3HOYC 4A3MC 2A69A 3HOUK 4C2MK 4XSZA 2E2JK 4OINA 3S1RK 3HOZK 1I6HK 3GTLC 4C3IC 1TWFC 4A3LK 2B63C 1Y1VK 4BBRK 2NVTC 3HOWK 5FLMC 1TWCC 4A3IC 3CQZK 4C3HK 2YU9K 5IP9C 5IP9K 3RZOC 4XSXA 1TWGC 4C3HC 2PPBA 4A93C 2WAQD 2A6EA 5M5XK 2A68A 3GTOK 2JA5C 4C3IK 3RZDC 2PMZD 2BE5A 5C3EC 1I6HC 2NVYC 3GTJC 3S16K 2E2JC 5IP7K 2O5IA 1TWAK 1SMYA 1I3QK 2E2IK 3I4NK 3S2DC 4MEYA 4QJVA 4A3JC 3GTGC 1TWAC 3DXJA 4BXXC 3HOXC 1XPPA 2CW0A 1YNJA 2R93K 3GTQK 3GTMC 4Y7NC 3HOXK 3RZDK 3I4MC 4Q5SA 4XLNA 4YG2A 3GTOC 5TMFA 4MQ9A 3GTKK 4BBSC 2JA8C 4LLGA 4JK1A 3S16C 5IYCC 5C4JC 2R7ZK 3GTKC 4GZYA 2JA7C 3HOWC 4Y52C 2NVTK 3S1MC 3S1MK 4LK0A 4Y52K 3HKZL 4A3LC 4YFKA 4Y7NK 3S2HC 2R93C 5IYBC 1BDFA 3M4OC 3HOUC 1R9TC 3HOYK 3I4MK 4A3GC 4X6AC 3GTJK 2NVYK 4AYBD 3PO3C 5TMCA 3H3VD 4A3FC 4QIWD 3S1RC 3HOZC 4A3BC 4XLPA 2JA6K 3S14K 3PO3K 4BXXK 3S2DK 4A3GK 3I4NC 4X6AK 4BY7C 2NVXK 1SFOC 2PMZL 4LJZA 3RZOK 4A3KK 4OIPA 4A3DK 1IW7A 2YU9C 3S1NC 5C3EK 2WB1D 3S15C 4YFXA 3S15K 2PA8L 5C44C 4A3DC 2Y0SL 4KN7A 3FKIK 4AYBL 1TWFK 5C44K 3HOVK 3EQLA 1Y1WC 2NVQC 1WCMK 1K83C 4LK1A 3GTLK 5IYCK 5C4JK 4BY7K 1I50C 2VUMC 2JA8K 4YFNA 3S14C 3K7AC 4OIRA 4A3FK 2O5JA 4C3JC 4QIWL 1Y1VC 2B63K 3GTMK 2PA8D 2Y0SD 5D4DA 4G7HA 4C3JK 3PO2C 4G7OA 3M4OK 4C2MC 2E2HK 1R9TK 2NVQK 2A6HA 4MEXA 4A3CC 5C4XC 1WCMC 1Y1WK 4QJVB 4OIQA
chains in the Genus database with same CATH superfamily
3FKIC 3PIPS 4DDQA 4WFNS 4KMUA 3S1QC 4A3EK 3TTGA 4KM9A 3TFHA 3PIOS 2E2HC 4BY1K 3FHZA 3OPFA 3K7AK 4A3JK 2PHCB 4A3MK 3S2HK 3SZZA 1VH2A 2V6TA 1TWCA 4BLAA 2ZUEA 2KWAA 3SZYA 1I50K 1XXAA 1IL2A 2E2HA 4WF9S 4KARA 3N0CA 4LOWA 4A3IK 2JA6C 3S1NK 3S17C 3H0GA 4GTFA 2A69A 4C2MK 4XSZA 2E2JK 4OINA 3S1RK 4C3IC 5CHPA 3GEHA 1O28A 2P5MA 4C45A 5FLMC 1TWCC 3CQZK 5EGHA 5IP9C 1USOA 4KASA 2PPBA 4GTBA 4A93C 1SFOA 1JOEA 2A68A 1O2FB 5C3EC 1F7VA 1I6HC 2NVYC 3GTJC 3S16K 3V4GA 1I3QK 1XZQA 3S2DC 3GTGC 3DXJA 1VJEA 2CW0A 1YNJA 2XCRB 4Y7NC 3HOXK 4KDDA 5JVGS 2RH6A 4YG2A 4MQ9A 3ERED 4BBSC 2JA8C 1WOSA 1IS1A 5C4JC 2R7ZK 3HOWC 3S1MK 4LK0A 4Y7NK 1IBAA 2L3UA 2XCQA 1J6XA 3M4OC 1USMA 3HOYK 3I4MK 2NVYK 2V6SA 1PJ6A 3HOZC 2KPUA 3AD9C 2JA6K 3GDZA 2NVXK 1J6WA 4GTAA 2E2IA 4A3KK 4OIPA 5IOSA 1ZQ1C 4A3DC 2FQTA 4KN7A 5JVOA 5HL8A 5C4JK 5L46A 4YFNA 1J98A 3S14C 3K7AC 5HL7S 4U67S 4OIRA 3CF5S 3T02A 2JH3A 2B63K 2EBBA 1FEUA 3BP3A 3M4OK 2R92A 2A6HA 1WCMC 2NVQK 3CQZA 1YNNA 2GAHC 1YCLA 2ZJPS 4KN4A 4WILA 1O29A 2NVXC 4BBSK 2CFAB 1PJ7A 5IYDK 5DM7S 4ZH4A 3WODA 4WJ3M 4BY1C 2R92C 1WCMA 3GTLA 4A3EC 3HKZD 2R7ZC 3H3VL 3TFIA 3GEEA 5M5WK 3AH5A 1TWCK 1SFOK 2GSNA 1WQFA 2GSOA 3HOUK 4GTEA 3HOZK 4WFBS 2GSUA 3GTLC 3OREA 1ZXOA 2RGRA 3AQPA 4BKWA 4G0WA 2B63C 3GSIA 2NVTC 4A3IC 1WORA 2YU9K 5IP9K 1WOOA 4XSXA 1TWGC 3IPJA 2XCOA 3T01A 3AD7C 3RZDC 2BE5A 5IP7K 5IOTA 4MEYA 4A3JC 1TWAC 3HOXC 2R93K 1B4BA 4GFQA 3RZDK 3I4MC 3GTOC 3A8IA 3ADAC 3GTKK 1XZQB 3S16C 1TWGA 4Y52C 2NVTK 3S1MC 3LAJA 3HKZL 3S2HC 2VUMA 1BDFA 1TWAA 1DCOA 3HOUC 5HQHA 1I50A 2Y3PA 4A3GC 4X6AC 4AYBD 5TMCA 1PJ5A 3I4NC 1ISEA 1SFOC 4J3NA 1L0WA 1V5VA 1I3QA 2WB1D 3BP8C 4G0UA 2Y0SL 5C44C 5C44K 1Y1WC 1K83C 4LK1A 4WCES 1I50C 2VUMC 1X31C 2O5JA 4QIWL 4FM9A 2Y0SD 5D4DA 3LPXA 3OEPA 4P9SA 4C3JK 1F7UA 2L5NA 4XCHA 2JA8K 4MEXA 5C4XC 4OIQA 3M3YC 1F93A 3GIRA 1WSVA 3H0GC 3LAPA 1Y1WA 4NOIA 3MMLB 4KAWX 1XZPA 1TWFA 4G0VA 1TWGK 4IO9S 3GTQA 1K83A 1TWHK 3M3YK 4G7ZA 1J6VA 2WAQL 2JA5A 2E2IC 3L4JA 5IP7C 1XXBA 4PABA 2JA5K 3HOVC 1TWHC 1O2AA 3A8JA 3AD8C 1WOPA 1K83K 3G4AA 1EI6A 1AB4A 4BBRC 3GTQC 1WIHA 5M3FK 1IQ0A 4GTDA 4PAAA 1KQ4A 1BGWA 4Q4ZA 3HOYC 1DD5A 1UV7A 3DLLS 4A3LK 1JVIA 1DCPA 3HOWK 4KM8A 3RZOC 2JA7A 4C3HC 1WQGA 4ILDA 2PMZD 1GE9A 2KQ1A 2O5IA 1SMYA 4BLBA 3I4NK 4QJVA 4BXXC 4AH6A 3GTMC 1C0AA 2GAGC 4XLNA 1VGXA 1ZBSA 5TMFA 3HXAA 5DM6S 4GZYA 1WSRA 2JA7C 4Y52K 4A3LC 4YFKA 5IORA 1JQWA 5IYBC 2ZJRS 2ZJQS 2B63A 3L4KA 1O27A 3GTJK 3PO3C 1ZVUA 4A3FC 4QIWD 3S0XA 3PO3K 3S14K 2NVYA 4GTLA 3VA7A 2PMZL 3CAGA 4O2DA 3RZOK 4A3DK 1IW7A 3GTGA 4YFXA 2KXYA 3JSTA 3HOVK 3EQLA 2NVQC 1WCMK 5TJ3A 4A3FK 1Y1VC 1YX2A 1RU0A 4LQYA 3GTMK 4RMFA 4G7HA 3T00A 4G7OA 2V6UA 4KB2A 2JA6A 4M1XA 2E2HK 3GTPA 4QJVB 5IOQA 2JA7K 3H0GK 1WQHA 1EK8A 3N0BA 1O2BA 4A93K 3TFJA 1O26A 4A3CK 4KMAA 3G4CA 4OIOA 3PO2K 5FJ8K 5CJ9A 1Y1VA 1O25A 5JFEA 4GTCA 1I3QC 3GTPC 2WB1L 3GTPK 3BUEA 4KB4A 5IYBK 3GTJA 2R92K 1HQMA 2VUMK 1B4AA 5M5YK 3S17K 3S1QK 1I6VA 1ZYRA 4FZBA 4IOCS 5IYDC 3QX3A 4WJ4A 5C4XK 5M3MK 3CQZC 5FLMK 4A3BK 1VRQC 2ZFZA 4A3KC 1EH1A 3FOEA 4KMHA 3GTGK 4A3MC 3Q3QA 1VLOA 1DCHA 1EFWA 1I6HK 1TWFC 1Y1VK 3A8KA 4BBRK 4P5AA 4C3HK 3AQOA 5EGEA 2WAQD 2A6EA 5M5XK 3GTOK 4KC6A 2JA5C 4KMDA 4C3IK 1IE0A 1EQRA 1O24A 2E2JC 1XZPB 1TWAK 4GT9A 2E2IK 2W7VA 3NUHA 1XPPA 1INNA 1R9TA 4IOAS 3GTQK 3FOFA 4Q5SA 4LR2A 5E68A 1F9NA 2FQOA 2YU9A 4LLGA 4JK1A 5IYCC 3GTKC 1BJTA 2R93C 2ZUFA 5JVHS 1R9TC 2NVXA 2D6FC 3H3VD 3S1RC 4A3BC 4BXXK 4XLPA 4A3GK 4X6AK 3S2DK 4BY7C 3GEIA 1XXCA 3FKIA 1G51A 3GTKA 2P8TA 4LJZA 4KATA 4P5BA 2YU9C 3S1NC 5C3EK 3S15C 3S15K 1HI9A 4WFAS 2PA8L 2R93A 4AYBL 3FKIK 1TWFK 3GTLK 5IYCK 3GTOA 4BY7K 1BS2A 2R7ZA 3GTMA 4C3JC 1TWHA 2PA8D 3PO2C 3N3YA 4C2MC 3LYWA 1R9TK 4A3CC 1Y1WK 2CFAA
chains in the Genus database with same CATH topology
3FKIC 1YNNA 3M3YC 2JA7K 3H0GC 4KN4A 3H0GK 4KMUA 4NOIA 3S1QC 4A3EK 4A93K 2NVXC 1TWGK 4A3CK 4BBSK 2E2HC 5IYDK 4OIOA 3PO2K 1TWHK 4ZH4A 3WODA 3M3YK 4G7ZA 5FJ8K 4BY1K 4BY1C 2WAQL 2R92C 1I3QC 2E2IC 3GTPC 2WB1L 3K7AK 4A3JK 5IP7C 3GTPK 5IYBK 2VUMK 2R92K 1HQMA 4A3MK 5M5YK 3S2HK 4A3EC 3S17K 2JA5K 3S1QK 1I6VA 3HOVC 1TWHC 1ZYRA 3HKZD 5IYDC 2R7ZC 3H3VL 1I50K 1K83K 5M5WK 1TWCK 5C4XK 1SFOK 5M3MK 4BBRC 3CQZC 5FLMK 3GTQC 2JA6C 4A3IK 5M3FK 3S1NK 4A3BK 4A3KC 3S17C 3GTGK 4Q4ZA 3HOYC 4A3MC 2A69A 3HOUK 4C2MK 4XSZA 2E2JK 4OINA 3S1RK 3HOZK 1I6HK 3GTLC 4C3IC 1TWFC 4A3LK 2B63C 1Y1VK 4BBRK 2NVTC 3HOWK 5FLMC 1TWCC 4A3IC 3CQZK 4C3HK 2YU9K 5IP9C 5IP9K 3RZOC 4XSXA 1TWGC 4C3HC 2PPBA 4A93C 2WAQD 2A6EA 5M5XK 2A68A 3GTOK 2JA5C 4C3IK 3RZDC 2PMZD 2BE5A 5C3EC 1I6HC 2NVYC 3GTJC 3S16K 2E2JC 5IP7K 2O5IA 1TWAK 1SMYA 1I3QK 2E2IK 3I4NK 3S2DC 4MEYA 4QJVA 4A3JC 3GTGC 1TWAC 3DXJA 4BXXC 3HOXC 1XPPA 2CW0A 1YNJA 2R93K 3GTQK 3GTMC 4Y7NC 3HOXK 3RZDK 3I4MC 4Q5SA 4XLNA 4YG2A 3GTOC 5TMFA 4MQ9A 3GTKK 4BBSC 2JA8C 4LLGA 4JK1A 3S16C 5IYCC 5C4JC 2R7ZK 3GTKC 4GZYA 2JA7C 3HOWC 4Y52C 2NVTK 3S1MC 3S1MK 4LK0A 4Y52K 3HKZL 4A3LC 4YFKA 4Y7NK 3S2HC 2R93C 5IYBC 1BDFA 3M4OC 3HOUC 1R9TC 3HOYK 3I4MK 4A3GC 4X6AC 3GTJK 2NVYK 4AYBD 3PO3C 5TMCA 3H3VD 4A3FC 4QIWD 3S1RC 3HOZC 4A3BC 4XLPA 2JA6K 3S14K 3PO3K 4BXXK 3S2DK 4A3GK 3I4NC 4X6AK 4BY7C 2NVXK 1SFOC 2PMZL 4LJZA 3RZOK 4A3KK 4OIPA 4A3DK 1IW7A 2YU9C 3S1NC 5C3EK 2WB1D 3S15C 4YFXA 3S15K 2PA8L 5C44C 4A3DC 2Y0SL 4KN7A 3FKIK 4AYBL 1TWFK 5C44K 3HOVK 3EQLA 1Y1WC 2NVQC 1WCMK 1K83C 4LK1A 3GTLK 5IYCK 5C4JK 4BY7K 1I50C 2VUMC 2JA8K 4YFNA 3S14C 3K7AC 4OIRA 4A3FK 2O5JA 4C3JC 4QIWL 1Y1VC 2B63K 3GTMK 2PA8D 2Y0SD 5D4DA 4G7HA 4C3JK 3PO2C 4G7OA 3M4OK 4C2MC 2E2HK 1R9TK 2NVQK 2A6HA 4MEXA 4A3CC 5C4XC 1WCMC 1Y1WK 4QJVB 4OIQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3FKI C;  1YNN A;  3M3Y C;  2JA7 K;  3H0G C;  4KN4 A;  3H0G K;  4KMU A;  4NOI A;  3S1Q C;  4A3E K;  4A93 K;  2NVX C;  1TWG K;  4A3C K;  4BBS K;  2E2H C;  5IYD K;  4OIO A;  3PO2 K;  1TWH K;  4ZH4 A;  3WOD A;  3M3Y K;  4G7Z A;  5FJ8 K;  4BY1 K;  4BY1 C;  2WAQ L;  2R92 C;  1I3Q C;  2E2I C;  3GTP C;  2WB1 L;  3K7A K;  4A3J K;  5IP7 C;  3GTP K;  5IYB K;  2VUM K;  2R92 K;  1HQM A;  4A3M K;  5M5Y K;  3S2H K;  4A3E C;  3S17 K;  2JA5 K;  3S1Q K;  1I6V A;  3HOV C;  1TWH C;  1ZYR A;  3HKZ D;  5IYD C;  2R7Z C;  3H3V L;  1I50 K;  1K83 K;  5M5W K;  1TWC K;  5C4X K;  1SFO K;  5M3M K;  4BBR C;  3CQZ C;  5FLM K;  3GTQ C;  2JA6 C;  4A3I K;  5M3F K;  3S1N K;  4A3B K;  4A3K C;  3S17 C;  3GTG K;  4Q4Z A;  3HOY C;  4A3M C;  2A69 A;  3HOU K;  4C2M K;  4XSZ A;  2E2J K;  4OIN A;  3S1R K;  3HOZ K;  1I6H K;  3GTL C;  4C3I C;  1TWF C;  4A3L K;  2B63 C;  1Y1V K;  4BBR K;  2NVT C;  3HOW K;  5FLM C;  1TWC C;  4A3I C;  3CQZ K;  4C3H K;  2YU9 K;  5IP9 C;  5IP9 K;  3RZO C;  4XSX A;  1TWG C;  4C3H C;  2PPB A;  4A93 C;  2WAQ D;  2A6E A;  5M5X K;  2A68 A;  3GTO K;  2JA5 C;  4C3I K;  3RZD C;  2PMZ D;  2BE5 A;  5C3E C;  1I6H C;  2NVY C;  3GTJ C;  3S16 K;  2E2J C;  5IP7 K;  2O5I A;  1TWA K;  1SMY A;  1I3Q K;  2E2I K;  3I4N K;  3S2D C;  4MEY A;  4QJV A;  4A3J C;  3GTG C;  1TWA C;  3DXJ A;  4BXX C;  3HOX C;  1XPP A;  2CW0 A;  1YNJ A;  2R93 K;  3GTQ K;  3GTM C;  4Y7N C;  3HOX K;  3RZD K;  3I4M C;  4Q5S A;  4XLN A;  4YG2 A;  3GTO C;  5TMF A;  4MQ9 A;  3GTK K;  4BBS C;  2JA8 C;  4LLG A;  4JK1 A;  3S16 C;  5IYC C;  5C4J C;  2R7Z K;  3GTK C;  4GZY A;  2JA7 C;  3HOW C;  4Y52 C;  2NVT K;  3S1M C;  3S1M K;  4LK0 A;  4Y52 K;  3HKZ L;  4A3L C;  4YFK A;  4Y7N K;  3S2H C;  2R93 C;  5IYB C;  1BDF A;  3M4O C;  3HOU C;  1R9T C;  3HOY K;  3I4M K;  4A3G C;  4X6A C;  3GTJ K;  2NVY K;  4AYB D;  3PO3 C;  5TMC A;  3H3V D;  4A3F C;  4QIW D;  3S1R C;  3HOZ C;  4A3B C;  4XLP A;  2JA6 K;  3S14 K;  3PO3 K;  4BXX K;  3S2D K;  4A3G K;  3I4N C;  4X6A K;  4BY7 C;  2NVX K;  1SFO C;  2PMZ L;  4LJZ A;  3RZO K;  4A3K K;  4OIP A;  4A3D K;  1IW7 A;  2YU9 C;  3S1N C;  5C3E K;  2WB1 D;  3S15 C;  4YFX A;  3S15 K;  2PA8 L;  5C44 C;  4A3D C;  2Y0S L;  4KN7 A;  3FKI K;  4AYB L;  1TWF K;  5C44 K;  3HOV K;  3EQL A;  1Y1W C;  2NVQ C;  1WCM K;  1K83 C;  4LK1 A;  3GTL K;  5IYC K;  5C4J K;  4BY7 K;  1I50 C;  2VUM C;  2JA8 K;  4YFN A;  3S14 C;  3K7A C;  4OIR A;  4A3F K;  2O5J A;  4C3J C;  4QIW L;  1Y1V C;  2B63 K;  3GTM K;  2PA8 D;  2Y0S D;  5D4D A;  4G7H A;  4C3J K;  3PO2 C;  4G7O A;  3M4O K;  4C2M C;  2E2H K;  1R9T K;  2NVQ K;  2A6H A;  4MEX A;  4A3C C;  5C4X C;  1WCM C;  1Y1W K;  4QJV B;  4OIQ A; 
#chains in the Genus database with same CATH topology
 3FKI C;  3PIP S;  4DDQ A;  4WFN S;  4KMU A;  3S1Q C;  4A3E K;  3TTG A;  4KM9 A;  3TFH A;  3PIO S;  2E2H C;  4BY1 K;  3FHZ A;  3OPF A;  3K7A K;  4A3J K;  2PHC B;  4A3M K;  3S2H K;  3SZZ A;  1VH2 A;  2V6T A;  1TWC A;  4BLA A;  2ZUE A;  2KWA A;  3SZY A;  1I50 K;  1XXA A;  1IL2 A;  2E2H A;  4WF9 S;  4KAR A;  3N0C A;  4LOW A;  4A3I K;  2JA6 C;  3S1N K;  3S17 C;  3H0G A;  4GTF A;  2A69 A;  4C2M K;  4XSZ A;  2E2J K;  4OIN A;  3S1R K;  4C3I C;  5CHP A;  3GEH A;  1O28 A;  2P5M A;  4C45 A;  5FLM C;  1TWC C;  3CQZ K;  5EGH A;  5IP9 C;  1USO A;  4KAS A;  2PPB A;  4GTB A;  4A93 C;  1SFO A;  1JOE A;  2A68 A;  1O2F B;  5C3E C;  1F7V A;  1I6H C;  2NVY C;  3GTJ C;  3S16 K;  3V4G A;  1I3Q K;  1XZQ A;  3S2D C;  3GTG C;  3DXJ A;  1VJE A;  2CW0 A;  1YNJ A;  2XCR B;  4Y7N C;  3HOX K;  4KDD A;  5JVG S;  2RH6 A;  4YG2 A;  4MQ9 A;  3ERE D;  4BBS C;  2JA8 C;  1WOS A;  1IS1 A;  5C4J C;  2R7Z K;  3HOW C;  3S1M K;  4LK0 A;  4Y7N K;  1IBA A;  2L3U A;  2XCQ A;  1J6X A;  3M4O C;  1USM A;  3HOY K;  3I4M K;  2NVY K;  2V6S A;  1PJ6 A;  3HOZ C;  2KPU A;  3AD9 C;  2JA6 K;  3GDZ A;  2NVX K;  1J6W A;  4GTA A;  2E2I A;  4A3K K;  4OIP A;  5IOS A;  1ZQ1 C;  4A3D C;  2FQT A;  4KN7 A;  5JVO A;  5HL8 A;  5C4J K;  5L46 A;  4YFN A;  1J98 A;  3S14 C;  3K7A C;  5HL7 S;  4U67 S;  4OIR A;  3CF5 S;  3T02 A;  2JH3 A;  2B63 K;  2EBB A;  1FEU A;  3BP3 A;  3M4O K;  2R92 A;  2A6H A;  1WCM C;  2NVQ K;  3CQZ A;  1YNN A;  2GAH C;  1YCL A;  2ZJP S;  4KN4 A;  4WIL A;  1O29 A;  2NVX C;  4BBS K;  2CFA B;  1PJ7 A;  5IYD K;  5DM7 S;  4ZH4 A;  3WOD A;  4WJ3 M;  4BY1 C;  2R92 C;  1WCM A;  3GTL A;  4A3E C;  3HKZ D;  2R7Z C;  3H3V L;  3TFI A;  3GEE A;  5M5W K;  3AH5 A;  1TWC K;  1SFO K;  2GSN A;  1WQF A;  2GSO A;  3HOU K;  4GTE A;  3HOZ K;  4WFB S;  2GSU A;  3GTL C;  3ORE A;  1ZXO A;  2RGR A;  3AQP A;  4BKW A;  4G0W A;  2B63 C;  3GSI A;  2NVT C;  4A3I C;  1WOR A;  2YU9 K;  5IP9 K;  1WOO A;  4XSX A;  1TWG C;  3IPJ A;  2XCO A;  3T01 A;  3AD7 C;  3RZD C;  2BE5 A;  5IP7 K;  5IOT A;  4MEY A;  4A3J C;  1TWA C;  3HOX C;  2R93 K;  1B4B A;  4GFQ A;  3RZD K;  3I4M C;  3GTO C;  3A8I A;  3ADA C;  3GTK K;  1XZQ B;  3S16 C;  1TWG A;  4Y52 C;  2NVT K;  3S1M C;  3LAJ A;  3HKZ L;  3S2H C;  2VUM A;  1BDF A;  1TWA A;  1DCO A;  3HOU C;  5HQH A;  1I50 A;  2Y3P A;  4A3G C;  4X6A C;  4AYB D;  5TMC A;  1PJ5 A;  3I4N C;  1ISE A;  1SFO C;  4J3N A;  1L0W A;  1V5V A;  1I3Q A;  2WB1 D;  3BP8 C;  4G0U A;  2Y0S L;  5C44 C;  5C44 K;  1Y1W C;  1K83 C;  4LK1 A;  4WCE S;  1I50 C;  2VUM C;  1X31 C;  2O5J A;  4QIW L;  4FM9 A;  2Y0S D;  5D4D A;  3LPX A;  3OEP A;  4P9S A;  4C3J K;  1F7U A;  2L5N A;  4XCH A;  2JA8 K;  4MEX A;  5C4X C;  4OIQ A;  3M3Y C;  1F93 A;  3GIR A;  1WSV A;  3H0G C;  3LAP A;  1Y1W A;  4NOI A;  3MML B;  4KAW X;  1XZP A;  1TWF A;  4G0V A;  1TWG K;  4IO9 S;  3GTQ A;  1K83 A;  1TWH K;  3M3Y K;  4G7Z A;  1J6V A;  2WAQ L;  2JA5 A;  2E2I C;  3L4J A;  5IP7 C;  1XXB A;  4PAB A;  2JA5 K;  3HOV C;  1TWH C;  1O2A A;  3A8J A;  3AD8 C;  1WOP A;  1K83 K;  3G4A A;  1EI6 A;  1AB4 A;  4BBR C;  3GTQ C;  1WIH A;  5M3F K;  1IQ0 A;  4GTD A;  4PAA A;  1KQ4 A;  1BGW A;  4Q4Z A;  3HOY C;  1DD5 A;  1UV7 A;  3DLL S;  4A3L K;  1JVI A;  1DCP A;  3HOW K;  4KM8 A;  3RZO C;  2JA7 A;  4C3H C;  1WQG A;  4ILD A;  2PMZ D;  1GE9 A;  2KQ1 A;  2O5I A;  1SMY A;  4BLB A;  3I4N K;  4QJV A;  4BXX C;  4AH6 A;  3GTM C;  1C0A A;  2GAG C;  4XLN A;  1VGX A;  1ZBS A;  5TMF A;  3HXA A;  5DM6 S;  4GZY A;  1WSR A;  2JA7 C;  4Y52 K;  4A3L C;  4YFK A;  5IOR A;  1JQW A;  5IYB C;  2ZJR S;  2ZJQ S;  2B63 A;  3L4K A;  1O27 A;  3GTJ K;  3PO3 C;  1ZVU A;  4A3F C;  4QIW D;  3S0X A;  3PO3 K;  3S14 K;  2NVY A;  4GTL A;  3VA7 A;  2PMZ L;  3CAG A;  4O2D A;  3RZO K;  4A3D K;  1IW7 A;  3GTG A;  4YFX A;  2KXY A;  3JST A;  3HOV K;  3EQL A;  2NVQ C;  1WCM K;  5TJ3 A;  4A3F K;  1Y1V C;  1YX2 A;  1RU0 A;  4LQY A;  3GTM K;  4RMF A;  4G7H A;  3T00 A;  4G7O A;  2V6U A;  4KB2 A;  2JA6 A;  4M1X A;  2E2H K;  3GTP A;  4QJV B;  5IOQ A;  2JA7 K;  3H0G K;  1WQH A;  1EK8 A;  3N0B A;  1O2B A;  4A93 K;  3TFJ A;  1O26 A;  4A3C K;  4KMA A;  3G4C A;  4OIO A;  3PO2 K;  5FJ8 K;  5CJ9 A;  1Y1V A;  1O25 A;  5JFE A;  4GTC A;  1I3Q C;  3GTP C;  2WB1 L;  3GTP K;  3BUE A;  4KB4 A;  5IYB K;  3GTJ A;  2R92 K;  1HQM A;  2VUM K;  1B4A A;  5M5Y K;  3S17 K;  3S1Q K;  1I6V A;  1ZYR A;  4FZB A;  4IOC S;  5IYD C;  3QX3 A;  4WJ4 A;  5C4X K;  5M3M K;  3CQZ C;  5FLM K;  4A3B K;  1VRQ C;  2ZFZ A;  4A3K C;  1EH1 A;  3FOE A;  4KMH A;  3GTG K;  4A3M C;  3Q3Q A;  1VLO A;  1DCH A;  1EFW A;  1I6H K;  1TWF C;  1Y1V K;  3A8K A;  4BBR K;  4P5A A;  4C3H K;  3AQO A;  5EGE A;  2WAQ D;  2A6E A;  5M5X K;  3GTO K;  4KC6 A;  2JA5 C;  4KMD A;  4C3I K;  1IE0 A;  1EQR A;  1O24 A;  2E2J C;  1XZP B;  1TWA K;  4GT9 A;  2E2I K;  2W7V A;  3NUH A;  1XPP A;  1INN A;  1R9T A;  4IOA S;  3GTQ K;  3FOF A;  4Q5S A;  4LR2 A;  5E68 A;  1F9N A;  2FQO A;  2YU9 A;  4LLG A;  4JK1 A;  5IYC C;  3GTK C;  1BJT A;  2R93 C;  2ZUF A;  5JVH S;  1R9T C;  2NVX A;  2D6F C;  3H3V D;  3S1R C;  4A3B C;  4BXX K;  4XLP A;  4A3G K;  4X6A K;  3S2D K;  4BY7 C;  3GEI A;  1XXC A;  3FKI A;  1G51 A;  3GTK A;  2P8T A;  4LJZ A;  4KAT A;  4P5B A;  2YU9 C;  3S1N C;  5C3E K;  3S15 C;  3S15 K;  1HI9 A;  4WFA S;  2PA8 L;  2R93 A;  4AYB L;  3FKI K;  1TWF K;  3GTL K;  5IYC K;  3GTO A;  4BY7 K;  1BS2 A;  2R7Z A;  3GTM A;  4C3J C;  1TWH A;  2PA8 D;  3PO2 C;  3N3Y A;  4C2M C;  3LYW A;  1R9T K;  4A3C C;  1Y1W K;  2CFA A; 
#chains in the Genus database with same CATH homology
 3FKI C;  1YNN A;  3M3Y C;  2JA7 K;  3H0G C;  4KN4 A;  3H0G K;  4KMU A;  4NOI A;  3S1Q C;  4A3E K;  4A93 K;  2NVX C;  1TWG K;  4A3C K;  4BBS K;  2E2H C;  5IYD K;  4OIO A;  3PO2 K;  1TWH K;  4ZH4 A;  3WOD A;  3M3Y K;  4G7Z A;  5FJ8 K;  4BY1 K;  4BY1 C;  2WAQ L;  2R92 C;  1I3Q C;  2E2I C;  3GTP C;  2WB1 L;  3K7A K;  4A3J K;  5IP7 C;  3GTP K;  5IYB K;  2VUM K;  2R92 K;  1HQM A;  4A3M K;  5M5Y K;  3S2H K;  4A3E C;  3S17 K;  2JA5 K;  3S1Q K;  1I6V A;  3HOV C;  1TWH C;  1ZYR A;  3HKZ D;  5IYD C;  2R7Z C;  3H3V L;  1I50 K;  1K83 K;  5M5W K;  1TWC K;  5C4X K;  1SFO K;  5M3M K;  4BBR C;  3CQZ C;  5FLM K;  3GTQ C;  2JA6 C;  4A3I K;  5M3F K;  3S1N K;  4A3B K;  4A3K C;  3S17 C;  3GTG K;  4Q4Z A;  3HOY C;  4A3M C;  2A69 A;  3HOU K;  4C2M K;  4XSZ A;  2E2J K;  4OIN A;  3S1R K;  3HOZ K;  1I6H K;  3GTL C;  4C3I C;  1TWF C;  4A3L K;  2B63 C;  1Y1V K;  4BBR K;  2NVT C;  3HOW K;  5FLM C;  1TWC C;  4A3I C;  3CQZ K;  4C3H K;  2YU9 K;  5IP9 C;  5IP9 K;  3RZO C;  4XSX A;  1TWG C;  4C3H C;  2PPB A;  4A93 C;  2WAQ D;  2A6E A;  5M5X K;  2A68 A;  3GTO K;  2JA5 C;  4C3I K;  3RZD C;  2PMZ D;  2BE5 A;  5C3E C;  1I6H C;  2NVY C;  3GTJ C;  3S16 K;  2E2J C;  5IP7 K;  2O5I A;  1TWA K;  1SMY A;  1I3Q K;  2E2I K;  3I4N K;  3S2D C;  4MEY A;  4QJV A;  4A3J C;  3GTG C;  1TWA C;  3DXJ A;  4BXX C;  3HOX C;  1XPP A;  2CW0 A;  1YNJ A;  2R93 K;  3GTQ K;  3GTM C;  4Y7N C;  3HOX K;  3RZD K;  3I4M C;  4Q5S A;  4XLN A;  4YG2 A;  3GTO C;  5TMF A;  4MQ9 A;  3GTK K;  4BBS C;  2JA8 C;  4LLG A;  4JK1 A;  3S16 C;  5IYC C;  5C4J C;  2R7Z K;  3GTK C;  4GZY A;  2JA7 C;  3HOW C;  4Y52 C;  2NVT K;  3S1M C;  3S1M K;  4LK0 A;  4Y52 K;  3HKZ L;  4A3L C;  4YFK A;  4Y7N K;  3S2H C;  2R93 C;  5IYB C;  1BDF A;  3M4O C;  3HOU C;  1R9T C;  3HOY K;  3I4M K;  4A3G C;  4X6A C;  3GTJ K;  2NVY K;  4AYB D;  3PO3 C;  5TMC A;  3H3V D;  4A3F C;  4QIW D;  3S1R C;  3HOZ C;  4A3B C;  4XLP A;  2JA6 K;  3S14 K;  3PO3 K;  4BXX K;  3S2D K;  4A3G K;  3I4N C;  4X6A K;  4BY7 C;  2NVX K;  1SFO C;  2PMZ L;  4LJZ A;  3RZO K;  4A3K K;  4OIP A;  4A3D K;  1IW7 A;  2YU9 C;  3S1N C;  5C3E K;  2WB1 D;  3S15 C;  4YFX A;  3S15 K;  2PA8 L;  5C44 C;  4A3D C;  2Y0S L;  4KN7 A;  3FKI K;  4AYB L;  1TWF K;  5C44 K;  3HOV K;  3EQL A;  1Y1W C;  2NVQ C;  1WCM K;  1K83 C;  4LK1 A;  3GTL K;  5IYC K;  5C4J K;  4BY7 K;  1I50 C;  2VUM C;  2JA8 K;  4YFN A;  3S14 C;  3K7A C;  4OIR A;  4A3F K;  2O5J A;  4C3J C;  4QIW L;  1Y1V C;  2B63 K;  3GTM K;  2PA8 D;  2Y0S D;  5D4D A;  4G7H A;  4C3J K;  3PO2 C;  4G7O A;  3M4O K;  4C2M C;  2E2H K;  1R9T K;  2NVQ K;  2A6H A;  4MEX A;  4A3C C;  5C4X C;  1WCM C;  1Y1W K;  4QJV B;  4OIQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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