1SGPI

Ala 18 variant of turkey ovomucoid inhibitor third domain complexed with streptomyces griseus proteinase b
Total Genus 12
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
51
structure length
51
Chain Sequence
VDCSEYPKPACTAEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Complex (serine protease/inhibitor)
molecule keywords STREPTOMYCES GRISEUS PROTEINASE B
publication title Water molecules participate in proteinase-inhibitor interactions: crystal structures of Leu18, Ala18, and Gly18 variants of turkey ovomucoid inhibitor third domain complexed with Streptomyces griseus proteinase B.
pubmed rcsb
source organism Streptomyces griseus
total genus 12
structure length 51
sequence length 51
ec nomenclature
pdb deposition date 1995-05-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1sgpI00
2LEOA 1TGSI 1CE3A 2OVOA 1DS3I 1TUSA 1M8BA 1M8CA 1TIHA 1UVGA 2NU4I 2BUSA 2KCXA 2P6AC 1R0RI 2N52A 1TBQR 1SGEI 1AN1I 2GKTI 2KMQA 2V53A 1DS2I 2KMOA 3TJQA 1BUSA 1IY5A 2JYYA 1SGRI 1HPTA 1LR7A 2B0UC 1SGPI 1TURA 1UVFA 3OVOA 1CHOI 2NU1I 1SGQI 3SGBI 1IY6A 1CT4I 3HH2C 4SGBI 1N13A 4GI3C 1FYBA 3B4VC 1MT1A 2JZMA 2N71A 3SEKC 2WCYA 1CT0I 1LR8A 1HDLA 5JHWC 2KMRA 1CGJI 2SGFI 1Z7KB 1TBRR 3SGQI 1OVOA 1UUCA 2XRCA 2NU3I 1OMTA 1CGII 2M5XA 2SGQI 5DAEA 2SGDI 1Y1BA 4OVOA 1OYVI 1SGNI 2GKRI 2NU2I 1Y1CA 2ERWA 1CT2I 1SGDI 2SGEI 3QTLD 1BMOA 2SGPI 2ARPF 2N17A 1CSOI 1HJAI 1IW4A 2GKVA 1KMAA 1YTPA 1NUBA 1LR9A 2NU0I 1OMUA 1PPFI 1H0ZA 4HGUA 2QQCA 2JXDA 2QQDA 2KMPA 1SGYI 1PCEA 1YU6C 2F3CI 1PJUA
chains in the Genus database with same CATH superfamily
2LEOA 1KBFA 1TGSI 1CE3A 2OVOA 3PDNA 1DS3I 1TUSA 2GVIA 4MPIA 1M8BA 1M8CA 1TIHA 1UVGA 1WKXA 2QQEA 1NXUA 2NU4I 5E3PA 4UXIA 3UFFA 2DIPA 1P9GA 2BUSA 5EX3A 2KCXA 3E59A 2P6AC 2CJSC 1R0RI 2ORWA 2N52A 1TBQR 4UXJA 4L9MA 1SGEI 4A24A 5J8FA 1AN1I 2QQ0A 2DB6A 3TO7A 3OXGA 1TBNA 2VRWB 3KY9A 1TOTA 1HEVA 2GKTI 2KMQA 3TOBA 2E73A 1DS2I 2V53A 4E1RA 3VE5A 5E3RA 2CWHA 2KMOA 7WGAA 3TJQA 2ODDA 1BUSA 2LB7A 1IY5A 1XBTA 3UEJA 1WGCA 3TO6A 1MJ9A 2RIJA 3OL0A 2JYYA 3D00A 1SGRI 3MEKA 1HPTA 1V1HA 2UZ3A 1K7UA 4FKDA 3FSYA 1LR7A 2B0UC 1SGPI 1VDDA 1TURA 1UVFA 2OD1A 2K9HA 3OVOA 1CHOI 2ROWA 2NU1I 1SGQI 2ELIA 2N1AB 3R5CA 1CT4I 3SGBI 4E1PA 3VDUA 5FUYA 2L7XA 3HH2C 4SGBI 1IY6A 1N13A 2J87A 1UHAA 4GI3C 1FYBA 4WP4A 3E2IA 3UGLA 3B4VC 1PTRA 1MT1A 3TO9A 1ULKA 2JZMA 2N71A 1V1IA 1Q9BA 2YUUA 3SEKC 2WCYA 1CT0I 1XA6A 3UOEA 1LR8A 3R5DA 1HDLA 4JCVE 1XX6A 1Z2IA 2KMRA 3QAHA 5FUWA 5FUXA 5HI7A 1CGJI 5JHWC 2QPOA 2SGFI 1Z7KB 2X52A 2CWGA 1TBRR 1S20A 3SGQI 1OVOA 1UUCA 2JW6A 2XRCA 2NU3I 3BJIA 3R5BA 5FUVA 5CCLA 1OMTA 1K7VA 1CGII 2ORVA 4B6DA 2M5XA 3RU0A 1X4SA 2B8TA 2Y0MA 1MJAA 1FY7A 2SGQI 5DAEA 2UVOA 2SGDI 3VDPA 1FAQA 1Y1BA 4OVOA 1OYVI 3FC3A 2OZUA 1SGNI 2V1CA 2GKRI 1ULNA 2E5RA 3CXLA 5CCMA 2NU2I 1Y1CA 2ERWA 2FNFX 1WTJA 1KBEA 1CT2I 1WGTA 1SGDI 2SGEI 3QTLD 3QWPA 2RC4A 3UEYA 3UGIA 4DNCA 2V1CC 1BMOA 2SGPI 2WGCA 2ARPF 2OU2A 2PQ8A 1FARA 4AMLA 2N17A 1CSOI 2A20A 3TOAA 1HJAI 2GIVA 1U5KA 4UXHA 5J8CA 1IW4A 2ENZA 3R5AA 2GKVA 2CWFA 1PTQA 1KMAA 3FSXA 2W0TA 1Y8FA 1K7TA 2JA1A 2L8EA 1YTPA 1NUBA 1ULMA 2X3TA 3OXFA 1LR9A 2NU0I 2YQPA 1TBOA 1OMUA 1PPFI 2LUYA 1H0ZA 3UGDA 1X74A 2J9RA 2QQCA 4HGUA 5E3QA 3GOXA 1MJBA 1RFHA 2JXDA 2QQDA 5HQ8A 2ENNA 2KMPA 5EX0A 1SGYI 9WGAA 1W3SA 2WVJA 1PCEA 1YU6C 2DKVA 1W4RA 1R79A 2F3CI 1P9ZA 1PJUA 3OXLA
chains in the Genus database with same CATH topology
2LEOA 1KBFA 1TGSI 1CE3A 2OVOA 3PDNA 1DS3I 1TUSA 2GVIA 1M8BA 1M8CA 1TIHA 1UVGA 2QQEA 3UFFA 2NU4I 4UXIA 2DIPA 5EX3A 2BUSA 2KCXA 3E59A 2P6AC 2CJSC 1R0RI 2ORWA 2N52A 1TBQR 4UXJA 4L9MA 1SGEI 4A24A 1AN1I 2QQ0A 2DB6A 3OXGA 1TBNA 2VRWB 3KY9A 1TOTA 2GKTI 2KMQA 2E73A 1DS2I 2V53A 4E1RA 3VE5A 2KMOA 3TJQA 2ODDA 1BUSA 1IY5A 1XBTA 3UEJA 3OL0A 2JYYA 3D00A 1SGRI 3MEKA 1HPTA 1V1HA 2UZ3A 4FKDA 1LR7A 2B0UC 1SGPI 1VDDA 1TURA 1UVFA 2OD1A 2K9HA 3OVOA 1CHOI 2ROWA 2NU1I 1SGQI 2ELIA 2N1AB 3SGBI 1CT4I 4E1PA 1IY6A 3VDUA 5FUYA 2L7XA 3HH2C 4SGBI 1N13A 2J87A 4GI3C 1FYBA 3E2IA 3UGLA 3B4VC 1PTRA 1MT1A 2JZMA 2N71A 1V1IA 2YUUA 3SEKC 2WCYA 1CT0I 1XA6A 1LR8A 1HDLA 4JCVE 1XX6A 5HI7A 2KMRA 5FUWA 5FUXA 5JHWC 1CGJI 2QPOA 2SGFI 1Z7KB 1TBRR 3SGQI 1OVOA 1UUCA 2JW6A 2XRCA 2NU3I 3BJIA 5FUVA 5CCLA 1OMTA 2ORVA 1CGII 4B6DA 2M5XA 3RU0A 1X4SA 2B8TA 2SGQI 5DAEA 2SGDI 3VDPA 1FAQA 1Y1BA 4OVOA 1OYVI 3FC3A 1SGNI 2V1CA 2GKRI 5CCMA 2E5RA 3CXLA 2NU2I 1Y1CA 2ERWA 2FNFX 1KBEA 1CT2I 1SGDI 2SGEI 3QTLD 3QWPA 3UGIA 3UEYA 2V1CC 1BMOA 2SGPI 2ARPF 1FARA 2N17A 1CSOI 2A20A 1HJAI 4UXHA 1U5KA 1IW4A 2ENZA 2GKVA 1KMAA 1PTQA 2W0TA 1Y8FA 2JA1A 2L8EA 1YTPA 1NUBA 3OXFA 1LR9A 2NU0I 2YQPA 1TBOA 1OMUA 1PPFI 2LUYA 1H0ZA 3UGDA 1X74A 2J9RA 2QQCA 4HGUA 3GOXA 1RFHA 2JXDA 2QQDA 5HQ8A 2ENNA 2KMPA 5EX0A 1SGYI 1W3SA 2WVJA 1PCEA 1YU6C 1W4RA 1R79A 2F3CI 1PJUA 3OXLA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2LEO A;  1TGS I;  1CE3 A;  2OVO A;  1DS3 I;  1TUS A;  1M8B A;  1M8C A;  1TIH A;  1UVG A;  2NU4 I;  2BUS A;  2KCX A;  2P6A C;  1R0R I;  2N52 A;  1TBQ R;  1SGE I;  1AN1 I;  2GKT I;  2KMQ A;  2V53 A;  1DS2 I;  2KMO A;  3TJQ A;  1BUS A;  1IY5 A;  2JYY A;  1SGR I;  1HPT A;  1LR7 A;  2B0U C;  1SGP I;  1TUR A;  1UVF A;  3OVO A;  1CHO I;  2NU1 I;  1SGQ I;  3SGB I;  1IY6 A;  1CT4 I;  3HH2 C;  4SGB I;  1N13 A;  4GI3 C;  1FYB A;  3B4V C;  1MT1 A;  2JZM A;  2N71 A;  3SEK C;  2WCY A;  1CT0 I;  1LR8 A;  1HDL A;  5JHW C;  2KMR A;  1CGJ I;  2SGF I;  1Z7K B;  1TBR R;  3SGQ I;  1OVO A;  1UUC A;  2XRC A;  2NU3 I;  1OMT A;  1CGI I;  2M5X A;  2SGQ I;  5DAE A;  2SGD I;  1Y1B A;  4OVO A;  1OYV I;  1SGN I;  2GKR I;  2NU2 I;  1Y1C A;  2ERW A;  1CT2 I;  1SGD I;  2SGE I;  3QTL D;  1BMO A;  2SGP I;  2ARP F;  2N17 A;  1CSO I;  1HJA I;  1IW4 A;  2GKV A;  1KMA A;  1YTP A;  1NUB A;  1LR9 A;  2NU0 I;  1OMU A;  1PPF I;  1H0Z A;  4HGU A;  2QQC A;  2JXD A;  2QQD A;  2KMP A;  1SGY I;  1PCE A;  1YU6 C;  2F3C I;  1PJU A; 
#chains in the Genus database with same CATH topology
 2LEO A;  1KBF A;  1TGS I;  1CE3 A;  2OVO A;  3PDN A;  1DS3 I;  1TUS A;  2GVI A;  4MPI A;  1M8B A;  1M8C A;  1TIH A;  1UVG A;  1WKX A;  2QQE A;  1NXU A;  2NU4 I;  5E3P A;  4UXI A;  3UFF A;  2DIP A;  1P9G A;  2BUS A;  5EX3 A;  2KCX A;  3E59 A;  2P6A C;  2CJS C;  1R0R I;  2ORW A;  2N52 A;  1TBQ R;  4UXJ A;  4L9M A;  1SGE I;  4A24 A;  5J8F A;  1AN1 I;  2QQ0 A;  2DB6 A;  3TO7 A;  3OXG A;  1TBN A;  2VRW B;  3KY9 A;  1TOT A;  1HEV A;  2GKT I;  2KMQ A;  3TOB A;  2E73 A;  1DS2 I;  2V53 A;  4E1R A;  3VE5 A;  5E3R A;  2CWH A;  2KMO A;  7WGA A;  3TJQ A;  2ODD A;  1BUS A;  2LB7 A;  1IY5 A;  1XBT A;  3UEJ A;  1WGC A;  3TO6 A;  1MJ9 A;  2RIJ A;  3OL0 A;  2JYY A;  3D00 A;  1SGR I;  3MEK A;  1HPT A;  1V1H A;  2UZ3 A;  1K7U A;  4FKD A;  3FSY A;  1LR7 A;  2B0U C;  1SGP I;  1VDD A;  1TUR A;  1UVF A;  2OD1 A;  2K9H A;  3OVO A;  1CHO I;  2ROW A;  2NU1 I;  1SGQ I;  2ELI A;  2N1A B;  3R5C A;  1CT4 I;  3SGB I;  4E1P A;  3VDU A;  5FUY A;  2L7X A;  3HH2 C;  4SGB I;  1IY6 A;  1N13 A;  2J87 A;  1UHA A;  4GI3 C;  1FYB A;  4WP4 A;  3E2I A;  3UGL A;  3B4V C;  1PTR A;  1MT1 A;  3TO9 A;  1ULK A;  2JZM A;  2N71 A;  1V1I A;  1Q9B A;  2YUU A;  3SEK C;  2WCY A;  1CT0 I;  1XA6 A;  3UOE A;  1LR8 A;  3R5D A;  1HDL A;  4JCV E;  1XX6 A;  1Z2I A;  2KMR A;  3QAH A;  5FUW A;  5FUX A;  5HI7 A;  1CGJ I;  5JHW C;  2QPO A;  2SGF I;  1Z7K B;  2X52 A;  2CWG A;  1TBR R;  1S20 A;  3SGQ I;  1OVO A;  1UUC A;  2JW6 A;  2XRC A;  2NU3 I;  3BJI A;  3R5B A;  5FUV A;  5CCL A;  1OMT A;  1K7V A;  1CGI I;  2ORV A;  4B6D A;  2M5X A;  3RU0 A;  1X4S A;  2B8T A;  2Y0M A;  1MJA A;  1FY7 A;  2SGQ I;  5DAE A;  2UVO A;  2SGD I;  3VDP A;  1FAQ A;  1Y1B A;  4OVO A;  1OYV I;  3FC3 A;  2OZU A;  1SGN I;  2V1C A;  2GKR I;  1ULN A;  2E5R A;  3CXL A;  5CCM A;  2NU2 I;  1Y1C A;  2ERW A;  2FNF X;  1WTJ A;  1KBE A;  1CT2 I;  1WGT A;  1SGD I;  2SGE I;  3QTL D;  3QWP A;  2RC4 A;  3UEY A;  3UGI A;  4DNC A;  2V1C C;  1BMO A;  2SGP I;  2WGC A;  2ARP F;  2OU2 A;  2PQ8 A;  1FAR A;  4AML A;  2N17 A;  1CSO I;  2A20 A;  3TOA A;  1HJA I;  2GIV A;  1U5K A;  4UXH A;  5J8C A;  1IW4 A;  2ENZ A;  3R5A A;  2GKV A;  2CWF A;  1PTQ A;  1KMA A;  3FSX A;  2W0T A;  1Y8F A;  1K7T A;  2JA1 A;  2L8E A;  1YTP A;  1NUB A;  1ULM A;  2X3T A;  3OXF A;  1LR9 A;  2NU0 I;  2YQP A;  1TBO A;  1OMU A;  1PPF I;  2LUY A;  1H0Z A;  3UGD A;  1X74 A;  2J9R A;  2QQC A;  4HGU A;  5E3Q A;  3GOX A;  1MJB A;  1RFH A;  2JXD A;  2QQD A;  5HQ8 A;  2ENN A;  2KMP A;  5EX0 A;  1SGY I;  9WGA A;  1W3S A;  2WVJ A;  1PCE A;  1YU6 C;  2DKV A;  1W4R A;  1R79 A;  2F3C I;  1P9Z A;  1PJU A;  3OXL A; 
#chains in the Genus database with same CATH homology
 2LEO A;  1KBF A;  1TGS I;  1CE3 A;  2OVO A;  3PDN A;  1DS3 I;  1TUS A;  2GVI A;  1M8B A;  1M8C A;  1TIH A;  1UVG A;  2QQE A;  3UFF A;  2NU4 I;  4UXI A;  2DIP A;  5EX3 A;  2BUS A;  2KCX A;  3E59 A;  2P6A C;  2CJS C;  1R0R I;  2ORW A;  2N52 A;  1TBQ R;  4UXJ A;  4L9M A;  1SGE I;  4A24 A;  1AN1 I;  2QQ0 A;  2DB6 A;  3OXG A;  1TBN A;  2VRW B;  3KY9 A;  1TOT A;  2GKT I;  2KMQ A;  2E73 A;  1DS2 I;  2V53 A;  4E1R A;  3VE5 A;  2KMO A;  3TJQ A;  2ODD A;  1BUS A;  1IY5 A;  1XBT A;  3UEJ A;  3OL0 A;  2JYY A;  3D00 A;  1SGR I;  3MEK A;  1HPT A;  1V1H A;  2UZ3 A;  4FKD A;  1LR7 A;  2B0U C;  1SGP I;  1VDD A;  1TUR A;  1UVF A;  2OD1 A;  2K9H A;  3OVO A;  1CHO I;  2ROW A;  2NU1 I;  1SGQ I;  2ELI A;  2N1A B;  3SGB I;  1CT4 I;  4E1P A;  1IY6 A;  3VDU A;  5FUY A;  2L7X A;  3HH2 C;  4SGB I;  1N13 A;  2J87 A;  4GI3 C;  1FYB A;  3E2I A;  3UGL A;  3B4V C;  1PTR A;  1MT1 A;  2JZM A;  2N71 A;  1V1I A;  2YUU A;  3SEK C;  2WCY A;  1CT0 I;  1XA6 A;  1LR8 A;  1HDL A;  4JCV E;  1XX6 A;  5HI7 A;  2KMR A;  5FUW A;  5FUX A;  5JHW C;  1CGJ I;  2QPO A;  2SGF I;  1Z7K B;  1TBR R;  3SGQ I;  1OVO A;  1UUC A;  2JW6 A;  2XRC A;  2NU3 I;  3BJI A;  5FUV A;  5CCL A;  1OMT A;  2ORV A;  1CGI I;  4B6D A;  2M5X A;  3RU0 A;  1X4S A;  2B8T A;  2SGQ I;  5DAE A;  2SGD I;  3VDP A;  1FAQ A;  1Y1B A;  4OVO A;  1OYV I;  3FC3 A;  1SGN I;  2V1C A;  2GKR I;  5CCM A;  2E5R A;  3CXL A;  2NU2 I;  1Y1C A;  2ERW A;  2FNF X;  1KBE A;  1CT2 I;  1SGD I;  2SGE I;  3QTL D;  3QWP A;  3UGI A;  3UEY A;  2V1C C;  1BMO A;  2SGP I;  2ARP F;  1FAR A;  2N17 A;  1CSO I;  2A20 A;  1HJA I;  4UXH A;  1U5K A;  1IW4 A;  2ENZ A;  2GKV A;  1KMA A;  1PTQ A;  2W0T A;  1Y8F A;  2JA1 A;  2L8E A;  1YTP A;  1NUB A;  3OXF A;  1LR9 A;  2NU0 I;  2YQP A;  1TBO A;  1OMU A;  1PPF I;  2LUY A;  1H0Z A;  3UGD A;  1X74 A;  2J9R A;  2QQC A;  4HGU A;  3GOX A;  1RFH A;  2JXD A;  2QQD A;  5HQ8 A;  2ENN A;  2KMP A;  5EX0 A;  1SGY I;  1W3S A;  2WVJ A;  1PCE A;  1YU6 C;  1W4R A;  1R79 A;  2F3C I;  1PJU A;  3OXL A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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