1SPVA

Crystal structure of the putative phosphatase of escherichia coli, northeast structural genomoics target er58
Total Genus 55
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
55
sequence length
172
structure length
172
Chain Sequence
TRIHVVQGDITKLAVDVIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQGDCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTSVAFPAISTGVYGYPRAAAAEIAVKTVSEFITRHALPEQVYFVCYDEENAHLYERLLTQQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Structural genomics, unknown function
molecule keywords putative polyprotein/phosphatase
publication title Crystal Structure of the Putative Phosphatase of Escherichia coli, Northeast Structural Genomoics Target ER58
rcsb
source organism Escherichia coli
total genus 55
structure length 172
sequence length 172
ec nomenclature
pdb deposition date 2004-03-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01661 Macro Macro domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.220.10 Alpha Beta 3-Layer(aba) Sandwich Leucine Aminopeptidase, subunit E; domain 1 Leucine Aminopeptidase, subunit E, domain 1 1spvA00
4J4ZA 2VRIA 3EWRA 4J5QA 4JVVA 1SPVA 2ACFA 3KQZA 4ESSA 5CB5A 4ZX8A 3V2BA 4R7MA 2BFQA 1BPNA 1TY8A 2FAVA 3ETIA 3EWPA 4GVWA 5HIHA 2FG1A 3GQEA 3JRUA 1LCPA 3GPOA 4GVVA 5FSXA 3EWQA 5DUSA 3PEIA 2LGRA 5AILA 3T8WA 4R76A 2X47A 4ZY0A 1LAPA 3GPGA 3KR4A 3GQOA 5CB3A 1NJRA 4J5RA 5CBMA 2EEEA 3IIFA 3JZTA 2FXKA 3VFQA 5D8NA 3SIJA 4ZY2A 4KYBA 1GYTA 4ETKA 2L8RA 4J5SA 3V45A 4ABLA 1BPMA 2J9AA 3SIGA 2BFRA 4UMLA 4GUAA 1ZR5A 3Q6ZA 1LANA 1LAMA 4ZY1A 4ZX9A 4D86A 3KQXA 3EJGA 1TXZA 3Q71A 3H8FA 4ZI6A 3IJ3A 4JGKA 3IIDA 3KZWA 4R6TA 4ETJA 5HOLA 1YD9A 1ZR3A 2DX6A 5E3BA 1HJZA 4TU0A 3EKEA 3KR5A 2XD7A 3EW5A 4KSIA 3H8GA 5FSZA 3H8EA 2EWBA 4JCAA 1VHUA 3EWOA 3SIHA 4JLLA 5FSUA 3SIIA 4ABKA 5FSVA 3EJFA 2AFCA 5CMSA 5FSYA 1BLLE 4ZYQA 4K3NA 4IQYA 3GPQA 4X2TA 4K0CA
chains in the Genus database with same CATH superfamily
4J4ZA 2VRIA 3EWRA 4J5QA 4JVVA 1SPVA 2ACFA 3KQZA 4ESSA 5CB5A 4ZX8A 3V2BA 4R7MA 2BFQA 1BPNA 1TY8A 2FAVA 3ETIA 2JZDA 2KQVA 3EWPA 4GVWA 5HIHA 2FG1A 3GQEA 3JRUA 1LCPA 3GPOA 4GVVA 5FSXA 3EWQA 5DUSA 3PEIA 2LGRA 5AILA 3T8WA 4R76A 2X47A 4ZY0A 1LAPA 3GPGA 3KR4A 3GQOA 5CB3A 1NJRA 4J5RA 5CBMA 2EEEA 3IIFA 3JZTA 2FXKA 3VFQA 5D8NA 2RNKA 3SIJA 4ZY2A 4KYBA 1GYTA 4ETKA 2L8RA 4J5SA 2WCTA 3V45A 4ABLA 1BPMA 2J9AA 3SIGA 2BFRA 4UMLA 4GUAA 1ZR5A 3Q6ZA 1LANA 1LAMA 4ZY1A 4ZX9A 4D86A 3KQXA 3EJGA 1TXZA 3Q71A 3H8FA 4ZI6A 3IJ3A 4JGKA 3IIDA 3KZWA 4R6TA 2W2GA 4ETJA 5HOLA 1YD9A 1ZR3A 2DX6A 5E3BA 1HJZA 4TU0A 3EKEA 3KR5A 2XD7A 3EW5A 4KSIA 3H8GA 5FSZA 3H8EA 2EWBA 4JCAA 1VHUA 2JZFA 2JZEA 3EWOA 3SIHA 4JLLA 5FSUA 3SIIA 4ABKA 5FSVA 3EJFA 2AFCA 5CMSA 5FSYA 1BLLE 4ZYQA 4K3NA 4IQYA 3GPQA 4X2TA 4K0CA
chains in the Genus database with same CATH topology
4J4ZA 2VRIA 3EWRA 4J5QA 4JVVA 1SPVA 2ACFA 3KQZA 4ESSA 5CB5A 4ZX8A 3V2BA 4R7MA 2BFQA 1BPNA 1TY8A 2FAVA 3ETIA 3EWPA 4GVWA 5HIHA 2FG1A 3GQEA 3JRUA 1LCPA 3GPOA 4GVVA 5FSXA 3EWQA 5DUSA 3PEIA 2LGRA 5AILA 3T8WA 4R76A 2X47A 4ZY0A 1LAPA 3GPGA 3KR4A 3GQOA 5CB3A 1NJRA 4J5RA 5CBMA 2EEEA 3IIFA 3JZTA 2FXKA 3VFQA 5D8NA 3SIJA 4ZY2A 4KYBA 1GYTA 4ETKA 2L8RA 4J5SA 3V45A 4ABLA 1BPMA 2J9AA 3SIGA 2BFRA 4UMLA 4GUAA 1ZR5A 3Q6ZA 1LANA 1LAMA 4ZY1A 4ZX9A 4D86A 3KQXA 3EJGA 1TXZA 3Q71A 3H8FA 4ZI6A 3IJ3A 4JGKA 3IIDA 3KZWA 4R6TA 4ETJA 5HOLA 1YD9A 1ZR3A 2DX6A 5E3BA 1HJZA 4TU0A 3EKEA 3KR5A 2XD7A 3EW5A 4KSIA 3H8GA 5FSZA 3H8EA 2EWBA 4JCAA 1VHUA 3EWOA 3SIHA 4JLLA 5FSUA 3SIIA 4ABKA 5FSVA 3EJFA 2AFCA 5CMSA 5FSYA 1BLLE 4ZYQA 4K3NA 4IQYA 3GPQA 4X2TA 4K0CA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4J4Z A;  2VRI A;  3EWR A;  4J5Q A;  4JVV A;  1SPV A;  2ACF A;  3KQZ A;  4ESS A;  5CB5 A;  4ZX8 A;  3V2B A;  4R7M A;  2BFQ A;  1BPN A;  1TY8 A;  2FAV A;  3ETI A;  3EWP A;  4GVW A;  5HIH A;  2FG1 A;  3GQE A;  3JRU A;  1LCP A;  3GPO A;  4GVV A;  5FSX A;  3EWQ A;  5DUS A;  3PEI A;  2LGR A;  5AIL A;  3T8W A;  4R76 A;  2X47 A;  4ZY0 A;  1LAP A;  3GPG A;  3KR4 A;  3GQO A;  5CB3 A;  1NJR A;  4J5R A;  5CBM A;  2EEE A;  3IIF A;  3JZT A;  2FXK A;  3VFQ A;  5D8N A;  3SIJ A;  4ZY2 A;  4KYB A;  1GYT A;  4ETK A;  2L8R A;  4J5S A;  3V45 A;  4ABL A;  1BPM A;  2J9A A;  3SIG A;  2BFR A;  4UML A;  4GUA A;  1ZR5 A;  3Q6Z A;  1LAN A;  1LAM A;  4ZY1 A;  4ZX9 A;  4D86 A;  3KQX A;  3EJG A;  1TXZ A;  3Q71 A;  3H8F A;  4ZI6 A;  3IJ3 A;  4JGK A;  3IID A;  3KZW A;  4R6T A;  4ETJ A;  5HOL A;  1YD9 A;  1ZR3 A;  2DX6 A;  5E3B A;  1HJZ A;  4TU0 A;  3EKE A;  3KR5 A;  2XD7 A;  3EW5 A;  4KSI A;  3H8G A;  5FSZ A;  3H8E A;  2EWB A;  4JCA A;  1VHU A;  3EWO A;  3SIH A;  4JLL A;  5FSU A;  3SII A;  4ABK A;  5FSV A;  3EJF A;  2AFC A;  5CMS A;  5FSY A;  1BLL E;  4ZYQ A;  4K3N A;  4IQY A;  3GPQ A;  4X2T A;  4K0C A; 
#chains in the Genus database with same CATH topology
 4J4Z A;  2VRI A;  3EWR A;  4J5Q A;  4JVV A;  1SPV A;  2ACF A;  3KQZ A;  4ESS A;  5CB5 A;  4ZX8 A;  3V2B A;  4R7M A;  2BFQ A;  1BPN A;  1TY8 A;  2FAV A;  3ETI A;  2JZD A;  2KQV A;  3EWP A;  4GVW A;  5HIH A;  2FG1 A;  3GQE A;  3JRU A;  1LCP A;  3GPO A;  4GVV A;  5FSX A;  3EWQ A;  5DUS A;  3PEI A;  2LGR A;  5AIL A;  3T8W A;  4R76 A;  2X47 A;  4ZY0 A;  1LAP A;  3GPG A;  3KR4 A;  3GQO A;  5CB3 A;  1NJR A;  4J5R A;  5CBM A;  2EEE A;  3IIF A;  3JZT A;  2FXK A;  3VFQ A;  5D8N A;  2RNK A;  3SIJ A;  4ZY2 A;  4KYB A;  1GYT A;  4ETK A;  2L8R A;  4J5S A;  2WCT A;  3V45 A;  4ABL A;  1BPM A;  2J9A A;  3SIG A;  2BFR A;  4UML A;  4GUA A;  1ZR5 A;  3Q6Z A;  1LAN A;  1LAM A;  4ZY1 A;  4ZX9 A;  4D86 A;  3KQX A;  3EJG A;  1TXZ A;  3Q71 A;  3H8F A;  4ZI6 A;  3IJ3 A;  4JGK A;  3IID A;  3KZW A;  4R6T A;  2W2G A;  4ETJ A;  5HOL A;  1YD9 A;  1ZR3 A;  2DX6 A;  5E3B A;  1HJZ A;  4TU0 A;  3EKE A;  3KR5 A;  2XD7 A;  3EW5 A;  4KSI A;  3H8G A;  5FSZ A;  3H8E A;  2EWB A;  4JCA A;  1VHU A;  2JZF A;  2JZE A;  3EWO A;  3SIH A;  4JLL A;  5FSU A;  3SII A;  4ABK A;  5FSV A;  3EJF A;  2AFC A;  5CMS A;  5FSY A;  1BLL E;  4ZYQ A;  4K3N A;  4IQY A;  3GPQ A;  4X2T A;  4K0C A; 
#chains in the Genus database with same CATH homology
 4J4Z A;  2VRI A;  3EWR A;  4J5Q A;  4JVV A;  1SPV A;  2ACF A;  3KQZ A;  4ESS A;  5CB5 A;  4ZX8 A;  3V2B A;  4R7M A;  2BFQ A;  1BPN A;  1TY8 A;  2FAV A;  3ETI A;  3EWP A;  4GVW A;  5HIH A;  2FG1 A;  3GQE A;  3JRU A;  1LCP A;  3GPO A;  4GVV A;  5FSX A;  3EWQ A;  5DUS A;  3PEI A;  2LGR A;  5AIL A;  3T8W A;  4R76 A;  2X47 A;  4ZY0 A;  1LAP A;  3GPG A;  3KR4 A;  3GQO A;  5CB3 A;  1NJR A;  4J5R A;  5CBM A;  2EEE A;  3IIF A;  3JZT A;  2FXK A;  3VFQ A;  5D8N A;  3SIJ A;  4ZY2 A;  4KYB A;  1GYT A;  4ETK A;  2L8R A;  4J5S A;  3V45 A;  4ABL A;  1BPM A;  2J9A A;  3SIG A;  2BFR A;  4UML A;  4GUA A;  1ZR5 A;  3Q6Z A;  1LAN A;  1LAM A;  4ZY1 A;  4ZX9 A;  4D86 A;  3KQX A;  3EJG A;  1TXZ A;  3Q71 A;  3H8F A;  4ZI6 A;  3IJ3 A;  4JGK A;  3IID A;  3KZW A;  4R6T A;  4ETJ A;  5HOL A;  1YD9 A;  1ZR3 A;  2DX6 A;  5E3B A;  1HJZ A;  4TU0 A;  3EKE A;  3KR5 A;  2XD7 A;  3EW5 A;  4KSI A;  3H8G A;  5FSZ A;  3H8E A;  2EWB A;  4JCA A;  1VHU A;  3EWO A;  3SIH A;  4JLL A;  5FSU A;  3SII A;  4ABK A;  5FSV A;  3EJF A;  2AFC A;  5CMS A;  5FSY A;  1BLL E;  4ZYQ A;  4K3N A;  4IQY A;  3GPQ A;  4X2T A;  4K0C A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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