1T3QB

Crystal structure of quinoline 2-oxidoreductase from pseudomonas putida 86
Total Genus 253
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
253
sequence length
786
structure length
786
Chain Sequence
b'MMKHEVVALKKKSIGTSVLRREDTRLLTGRGRYIADLVLSGMLHVASLRSPFAHARIVSIDVADAQALPGVELVWCGADVAELSQGIVATMQVEGFQTTIQPLLANGVTRFVGEIVAVVVASSRAIAEDAAQLIQVEYEELPAVTGIEAALEGEARANDTLAGNVVSRTSRARDELAPIFASSAGVVRGQFSCGRVSACPMETRGAVAQYEWTTQQLILWTATQMPSFVRTMVAMFCAIPEHLIEVRVPDVGGGFGQKAHLHPEELLVCLLSRALGRPVRWIEDRQENFLGATHAKQQRNEMGLAFDGDGRFLALENRSITDGGAYNNLPWTQLVESHVGNAVILGVYKVPAVSEESIAVATNKCPIGAYRGVGFTAGQIARETLIDRAARQLGLSPFEIRRRNVVMPEDFPFTNRLGQTHREGTYLQTINLLEEMVNPEAFRQRQAEARARGKYLGLGVSVFNEVTGTGTRTLSFLGTPTTTHDSATVRIDPTGKVTVTTSLASSGQGHETTLAQIAADVLGVPASDVVIQAGSTKNTYGFGAYASRGAVIGAGSIGRAASIVRERVKQLAGHLLEAASEDIVIEDGLVHVAGVPAKGMPFAEVVGAAYFADATHPPGFDATLEATATYDPSDLVLANGGHAAIVEIDASTYATRVTDFFAVEDCGTMINPMIVEGQIRGGIAQAIGQTLLEEVIYDDFGQLVTTTLMDYLIPTTLDVPDIRIRHLETPSPLVPGGIKGMGESAMISAPAAVVAAVNDALAHLEVVIETVPITPERIFRSIQERP'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords quinoline 2-oxidoreductase small subunit
publication title Active site geometry and substrate recognition of the molybdenum hydroxylase quinoline 2-oxidoreductase.
pubmed doi rcsb
molecule tags Oxidoreductase
total genus 253
structure length 786
sequence length 786
chains with identical sequence E
ec nomenclature ec 1.3.99.17: Quinoline 2-oxidoreductase.
pdb deposition date 2004-04-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF01315 Ald_Xan_dh_C Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
B PF02738 Ald_Xan_dh_C2 Molybdopterin-binding domain of aldehyde dehydrogenase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.365.20 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4 1t3qB02
1T3QB
chains in the Genus database with same CATH superfamily
4USAA 3NVVC 1N61B 2E3TA 4US8A 1N5WB 3B9JC 1N62B 3AMZA 1JRPB 3L4PA 4C7ZA 1VLBA 3AM9A 2W55B 1VDVA 4C80A 1N60B 3ETRC 1DGJA 1RM6A 3NVYC 1SIJA 1N63B 3NRZC 3NS1C 2W3SB 1WYGA 4US9A 1FFVB 1ZXIB 2W54B 3AN1A 4ZOHA 3FAHA 3SR6C 1T3QB 1JROB 4C7YA 2W3RB 1N5XA 1V97A 3HRDB 1FO4A 1FFUB 3NVZC 3FC4A 3EUB4 1FIQC 3HRDA 1SB3A 3NVWC
chains in the Genus database with same CATH topology
1T3QB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1T3Q B; 
#chains in the Genus database with same CATH topology
 4USA A;  3NVV C;  1N61 B;  2E3T A;  4US8 A;  1N5W B;  3B9J C;  1N62 B;  3AMZ A;  1JRP B;  3L4P A;  4C7Z A;  1VLB A;  3AM9 A;  2W55 B;  1VDV A;  4C80 A;  1N60 B;  3ETR C;  1DGJ A;  1RM6 A;  3NVY C;  1SIJ A;  1N63 B;  3NRZ C;  3NS1 C;  2W3S B;  1WYG A;  4US9 A;  1FFV B;  1ZXI B;  2W54 B;  3AN1 A;  4ZOH A;  3FAH A;  3SR6 C;  1T3Q B;  1JRO B;  4C7Y A;  2W3R B;  1N5X A;  1V97 A;  3HRD B;  1FO4 A;  1FFU B;  3NVZ C;  3FC4 A;  3EUB 4;  1FIQ C;  3HRD A;  1SB3 A;  3NVW C; 
#chains in the Genus database with same CATH homology
 1T3Q B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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