1T4RA

Arginase-descarboxy-nor-noha complex
Total Genus 117
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
117
sequence length
314
structure length
314
Chain Sequence
KPIEIIGAPFSKGQPRGGVEKGPAALRKAGLVEKLKETEYNVRDHGDLAFVDVPNDSPFQIVKNPRSVGKANEQLAAVVAETQKNGTISVVLGGDHSMAIGSISGHARVHPDLCVIWVDAHTDINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLRDVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNPTLGKTPEEVTRTVNTAVALTLSCFGTKREGNHKPETDYL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Arginase 1
publication title Inhibitor coordination interactions in the binuclear manganese cluster of arginase
pubmed doi rcsb
source organism Rattus norvegicus
total genus 117
structure length 314
sequence length 314
chains with identical sequence B, C
ec nomenclature ec 3.5.3.1: Arginase.
pdb deposition date 2004-04-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00491 Arginase Arginase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.800.10 Alpha Beta 3-Layer(aba) Sandwich Arginase; Chain A Ureohydrolase domain 1t4rA00
4RHQA 1HQ5A 3SKKA 4RHKA 2AEBA 3MFVA 4RHJA 1HQFA 4MYNA 4Q3SA 1TA1A 4RHIA 3NIOA 1T4RA 4HXQA 3TF3A 1GQ6A 4DZ4A 3GMZA 1XFKA 4Q3VA 3E6KA 1ZPGA 1TBHA 2RLAA 4Q3TA 2A0MA 4G3HA 3RLAA 1WOIA 3E8QA 5HJ9A 4Q3QA 3SL0A 3LP4A 1T5GA 1T4TA 1D3VA 4Q3RA 4FCIA 3MFWA 1P8OA 3LP7A 1T5FA 1WOGA 2PHOA 4IU5A 3TH7A 4FCKA 4CEVA 3CEVA 4MYFA 1P8SA 2ZAVA 3MJLA 4RLAA 1TBLA 4HZEA 3LHLA 3E6VA 4ITYA 4GWDA 4IU0A 4RHMA 1GQ7A 1P8NA 1HQXA 1CEVA 1T4SA 1PQ3A 3F80A 3THEA 4GWCA 4HWWA 1TBJA 4IU4A 4IXVA 4Q3RC 3E8ZA 5HJAA 3SL1A 1WVAA 4Q41A 3M1RA 3SJTA 4IXUA 4IE1A 4GSMA 4RHLA 3PZLA 4Q3PA 1T4PA 4Q42A 3MMRA 2CEVA 4I06A 1P8MA 3E9BA 1HQGA 1P8QA 4IE3A 4MYKA 2PLLA 2EIVA 4MXRA 2EF4A 3DJ8A 1R1OA 4IE2A 4Q3UA 3KV2A 2PHAA 4Q40A 1P8PA 3THHA 1RLAA 5RLAA 5CEVA 2EF5A 3NIPA 1P8RA 4MYLA 3THJA 3NIQA 1ZPEA 4GSVA 4IU1A 1WVBA 1WOHA 1HQHA 3GN0A 4GSZA
chains in the Genus database with same CATH superfamily
4RHQA 2VQOA 4QA4A 3EW8A 1HQ5A 3SKKA 3ZNSA 3MZ3A 4RHKA 4RN2A 2AEBA 3MFVA 5EFGA 4RHJA 5EFHA 1HQFA 5G3WA 4RN1A 4CBTA 1T69A 2VQQA 4MYNA 4Q3SA 1TA1A 4RHIA 3NIOA 1T4RA 4HXQA 3TF3A 1GQ6A 4DZ4A 3GMZA 1XFKA 4Q3VA 5G0JA 4BKXB 3EZPA 5G0HA 4QA2A 3E6KA 2VQJA 1ZPGA 1TBHA 2RLAA 4Q3TA 2A0MA 3MZ6A 3Q9CA 4G3HA 3RLAA 1WOIA 4QA5A 3E8QA 5LI3A 5THVA 5THSA 3EZTA 5HJ9A 5THTA 4Q3QA 3SL0A 3LP4A 5G1BA 3F0RA 5DC6A 1T5GA 5DC5A 1T4TA 3F06A 1D3VA 2V5WA 5EEFA 4Q3RA 3C10A 4QA0A 4FCIA 3MFWA 1P8OA 3LP7A 1T5FA 1WOGA 2VCGA 3RQDA 5EF8A 2PHOA 4QA6A 5G0IA 4IU5A 4ZURA 3TH7A 4LY1A 4FCKA 5G10A 4RN0A 4BZ6A 4CEVA 5EFJD 3CEVA 4MYFA 5IWGA 1P8SA 2ZAVA 2V5XA 3MJLA 4RLAA 1TBLA 4HZEA 3LHLA 5DC8A 4ZUQA 3E6VA 4ITYA 4GWDA 1VKGA 4IU0A 4RHMA 1C3SA 1GQ7A 1P8NA 5EF7A 4BZ8A 1HQXA 5FUEA 5DC7A 1C3RA 1CEVA 1T4SA 1PQ3A 3F80A 5D1DA 3THEA 3Q9BA 4GWCA 5BWZA 1T64A 4HWWA 1TBJA 4IU4A 4BZ5A 5JI5A 4IXVA 5G1CA 5G11A 4Q3RC 5G13A 3E8ZA 5G0YA 3EWFA 4CQFA 5ICNB 2VQVA 5HJAA 5EFNA 3SL1A 1ZZ3A 3MENA 4ZUNA 5IX0A 1WVAA 4Q41A 3M1RA 3MZ4A 5EENA 3SJTA 5EFBD 5G17A 4A69A 5D1BA 4IXUA 3SFFA 4CBYA 4IE1A 5THUA 2VQMA 3C0ZA 5G0GA 4GSMA 4RHLA 4BZ7A 3PZLA 5EFKB 4Q3PA 4ZUPA 1C3PA 2GH6A 1T4PA 4Q42A 3MMRA 5EEMA 3SFHA 2CEVA 4I06A 4QA3A 1P8MA 3E9BA 5EEIA 4LXZA 1T67A 1HQGA 1P8QA 2VQWG 4IE3A 4MYKA 2PLLA 2EIVA 4MXRA 3ZNRA 2EF4A 3DJ8A 1R1OA 3MAXA 4IE2A 4Q3UA 3KV2A 2PHAA 4Q40A 3MZ7A 1P8PA 3THHA 1RLAA 5RLAA 3Q9FA 5G12A 5A2SA 1W22A 1ZZ1A 3Q9EA 4QA1A 4ZUMA 5CEVA 5G0XA 2EF5A 3NIPA 5FCWA 4QA7A 1P8RA 4MYLA 3THJA 3NIQA 1ZPEA 4GSVA 4IU1A 1WVBA 3C0YA 1WOHA 3F07A 5D1CA 1HQHA 5G1AA 3GN0A 4GSZA 4BZ9A 1ZZ0A 4ZUOA 5EEKA
chains in the Genus database with same CATH topology
4RHQA 1HQ5A 3SKKA 4RHKA 2AEBA 3MFVA 4RHJA 1HQFA 4MYNA 4Q3SA 1TA1A 4RHIA 3NIOA 1T4RA 4HXQA 3TF3A 1GQ6A 4DZ4A 3GMZA 1XFKA 4Q3VA 3E6KA 1ZPGA 1TBHA 2RLAA 4Q3TA 2A0MA 4G3HA 3RLAA 1WOIA 3E8QA 5HJ9A 4Q3QA 3SL0A 3LP4A 1T5GA 1T4TA 1D3VA 4Q3RA 4FCIA 3MFWA 1P8OA 3LP7A 1T5FA 1WOGA 2PHOA 4IU5A 3TH7A 4FCKA 4CEVA 3CEVA 4MYFA 1P8SA 2ZAVA 3MJLA 4RLAA 1TBLA 4HZEA 3LHLA 3E6VA 4ITYA 4GWDA 4IU0A 4RHMA 1GQ7A 1P8NA 1HQXA 1CEVA 1T4SA 1PQ3A 3F80A 3THEA 4GWCA 4HWWA 1TBJA 4IU4A 4IXVA 4Q3RC 3E8ZA 5HJAA 3SL1A 1WVAA 4Q41A 3M1RA 3SJTA 4IXUA 4IE1A 4GSMA 4RHLA 3PZLA 4Q3PA 1T4PA 4Q42A 3MMRA 2CEVA 4I06A 1P8MA 3E9BA 1HQGA 1P8QA 4IE3A 4MYKA 2PLLA 2EIVA 4MXRA 2EF4A 3DJ8A 1R1OA 4IE2A 4Q3UA 3KV2A 2PHAA 4Q40A 1P8PA 3THHA 1RLAA 5RLAA 5CEVA 2EF5A 3NIPA 1P8RA 4MYLA 3THJA 3NIQA 1ZPEA 4GSVA 4IU1A 1WVBA 1WOHA 1HQHA 3GN0A 4GSZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4RHQ A;  1HQ5 A;  3SKK A;  4RHK A;  2AEB A;  3MFV A;  4RHJ A;  1HQF A;  4MYN A;  4Q3S A;  1TA1 A;  4RHI A;  3NIO A;  1T4R A;  4HXQ A;  3TF3 A;  1GQ6 A;  4DZ4 A;  3GMZ A;  1XFK A;  4Q3V A;  3E6K A;  1ZPG A;  1TBH A;  2RLA A;  4Q3T A;  2A0M A;  4G3H A;  3RLA A;  1WOI A;  3E8Q A;  5HJ9 A;  4Q3Q A;  3SL0 A;  3LP4 A;  1T5G A;  1T4T A;  1D3V A;  4Q3R A;  4FCI A;  3MFW A;  1P8O A;  3LP7 A;  1T5F A;  1WOG A;  2PHO A;  4IU5 A;  3TH7 A;  4FCK A;  4CEV A;  3CEV A;  4MYF A;  1P8S A;  2ZAV A;  3MJL A;  4RLA A;  1TBL A;  4HZE A;  3LHL A;  3E6V A;  4ITY A;  4GWD A;  4IU0 A;  4RHM A;  1GQ7 A;  1P8N A;  1HQX A;  1CEV A;  1T4S A;  1PQ3 A;  3F80 A;  3THE A;  4GWC A;  4HWW A;  1TBJ A;  4IU4 A;  4IXV A;  4Q3R C;  3E8Z A;  5HJA A;  3SL1 A;  1WVA A;  4Q41 A;  3M1R A;  3SJT A;  4IXU A;  4IE1 A;  4GSM A;  4RHL A;  3PZL A;  4Q3P A;  1T4P A;  4Q42 A;  3MMR A;  2CEV A;  4I06 A;  1P8M A;  3E9B A;  1HQG A;  1P8Q A;  4IE3 A;  4MYK A;  2PLL A;  2EIV A;  4MXR A;  2EF4 A;  3DJ8 A;  1R1O A;  4IE2 A;  4Q3U A;  3KV2 A;  2PHA A;  4Q40 A;  1P8P A;  3THH A;  1RLA A;  5RLA A;  5CEV A;  2EF5 A;  3NIP A;  1P8R A;  4MYL A;  3THJ A;  3NIQ A;  1ZPE A;  4GSV A;  4IU1 A;  1WVB A;  1WOH A;  1HQH A;  3GN0 A;  4GSZ A; 
#chains in the Genus database with same CATH topology
 4RHQ A;  2VQO A;  4QA4 A;  3EW8 A;  1HQ5 A;  3SKK A;  3ZNS A;  3MZ3 A;  4RHK A;  4RN2 A;  2AEB A;  3MFV A;  5EFG A;  4RHJ A;  5EFH A;  1HQF A;  5G3W A;  4RN1 A;  4CBT A;  1T69 A;  2VQQ A;  4MYN A;  4Q3S A;  1TA1 A;  4RHI A;  3NIO A;  1T4R A;  4HXQ A;  3TF3 A;  1GQ6 A;  4DZ4 A;  3GMZ A;  1XFK A;  4Q3V A;  5G0J A;  4BKX B;  3EZP A;  5G0H A;  4QA2 A;  3E6K A;  2VQJ A;  1ZPG A;  1TBH A;  2RLA A;  4Q3T A;  2A0M A;  3MZ6 A;  3Q9C A;  4G3H A;  3RLA A;  1WOI A;  4QA5 A;  3E8Q A;  5LI3 A;  5THV A;  5THS A;  3EZT A;  5HJ9 A;  5THT A;  4Q3Q A;  3SL0 A;  3LP4 A;  5G1B A;  3F0R A;  5DC6 A;  1T5G A;  5DC5 A;  1T4T A;  3F06 A;  1D3V A;  2V5W A;  5EEF A;  4Q3R A;  3C10 A;  4QA0 A;  4FCI A;  3MFW A;  1P8O A;  3LP7 A;  1T5F A;  1WOG A;  2VCG A;  3RQD A;  5EF8 A;  2PHO A;  4QA6 A;  5G0I A;  4IU5 A;  4ZUR A;  3TH7 A;  4LY1 A;  4FCK A;  5G10 A;  4RN0 A;  4BZ6 A;  4CEV A;  5EFJ D;  3CEV A;  4MYF A;  5IWG A;  1P8S A;  2ZAV A;  2V5X A;  3MJL A;  4RLA A;  1TBL A;  4HZE A;  3LHL A;  5DC8 A;  4ZUQ A;  3E6V A;  4ITY A;  4GWD A;  1VKG A;  4IU0 A;  4RHM A;  1C3S A;  1GQ7 A;  1P8N A;  5EF7 A;  4BZ8 A;  1HQX A;  5FUE A;  5DC7 A;  1C3R A;  1CEV A;  1T4S A;  1PQ3 A;  3F80 A;  5D1D A;  3THE A;  3Q9B A;  4GWC A;  5BWZ A;  1T64 A;  4HWW A;  1TBJ A;  4IU4 A;  4BZ5 A;  5JI5 A;  4IXV A;  5G1C A;  5G11 A;  4Q3R C;  5G13 A;  3E8Z A;  5G0Y A;  3EWF A;  4CQF A;  5ICN B;  2VQV A;  5HJA A;  5EFN A;  3SL1 A;  1ZZ3 A;  3MEN A;  4ZUN A;  5IX0 A;  1WVA A;  4Q41 A;  3M1R A;  3MZ4 A;  5EEN A;  3SJT A;  5EFB D;  5G17 A;  4A69 A;  5D1B A;  4IXU A;  3SFF A;  4CBY A;  4IE1 A;  5THU A;  2VQM A;  3C0Z A;  5G0G A;  4GSM A;  4RHL A;  4BZ7 A;  3PZL A;  5EFK B;  4Q3P A;  4ZUP A;  1C3P A;  2GH6 A;  1T4P A;  4Q42 A;  3MMR A;  5EEM A;  3SFH A;  2CEV A;  4I06 A;  4QA3 A;  1P8M A;  3E9B A;  5EEI A;  4LXZ A;  1T67 A;  1HQG A;  1P8Q A;  2VQW G;  4IE3 A;  4MYK A;  2PLL A;  2EIV A;  4MXR A;  3ZNR A;  2EF4 A;  3DJ8 A;  1R1O A;  3MAX A;  4IE2 A;  4Q3U A;  3KV2 A;  2PHA A;  4Q40 A;  3MZ7 A;  1P8P A;  3THH A;  1RLA A;  5RLA A;  3Q9F A;  5G12 A;  5A2S A;  1W22 A;  1ZZ1 A;  3Q9E A;  4QA1 A;  4ZUM A;  5CEV A;  5G0X A;  2EF5 A;  3NIP A;  5FCW A;  4QA7 A;  1P8R A;  4MYL A;  3THJ A;  3NIQ A;  1ZPE A;  4GSV A;  4IU1 A;  1WVB A;  3C0Y A;  1WOH A;  3F07 A;  5D1C A;  1HQH A;  5G1A A;  3GN0 A;  4GSZ A;  4BZ9 A;  1ZZ0 A;  4ZUO A;  5EEK A; 
#chains in the Genus database with same CATH homology
 4RHQ A;  1HQ5 A;  3SKK A;  4RHK A;  2AEB A;  3MFV A;  4RHJ A;  1HQF A;  4MYN A;  4Q3S A;  1TA1 A;  4RHI A;  3NIO A;  1T4R A;  4HXQ A;  3TF3 A;  1GQ6 A;  4DZ4 A;  3GMZ A;  1XFK A;  4Q3V A;  3E6K A;  1ZPG A;  1TBH A;  2RLA A;  4Q3T A;  2A0M A;  4G3H A;  3RLA A;  1WOI A;  3E8Q A;  5HJ9 A;  4Q3Q A;  3SL0 A;  3LP4 A;  1T5G A;  1T4T A;  1D3V A;  4Q3R A;  4FCI A;  3MFW A;  1P8O A;  3LP7 A;  1T5F A;  1WOG A;  2PHO A;  4IU5 A;  3TH7 A;  4FCK A;  4CEV A;  3CEV A;  4MYF A;  1P8S A;  2ZAV A;  3MJL A;  4RLA A;  1TBL A;  4HZE A;  3LHL A;  3E6V A;  4ITY A;  4GWD A;  4IU0 A;  4RHM A;  1GQ7 A;  1P8N A;  1HQX A;  1CEV A;  1T4S A;  1PQ3 A;  3F80 A;  3THE A;  4GWC A;  4HWW A;  1TBJ A;  4IU4 A;  4IXV A;  4Q3R C;  3E8Z A;  5HJA A;  3SL1 A;  1WVA A;  4Q41 A;  3M1R A;  3SJT A;  4IXU A;  4IE1 A;  4GSM A;  4RHL A;  3PZL A;  4Q3P A;  1T4P A;  4Q42 A;  3MMR A;  2CEV A;  4I06 A;  1P8M A;  3E9B A;  1HQG A;  1P8Q A;  4IE3 A;  4MYK A;  2PLL A;  2EIV A;  4MXR A;  2EF4 A;  3DJ8 A;  1R1O A;  4IE2 A;  4Q3U A;  3KV2 A;  2PHA A;  4Q40 A;  1P8P A;  3THH A;  1RLA A;  5RLA A;  5CEV A;  2EF5 A;  3NIP A;  1P8R A;  4MYL A;  3THJ A;  3NIQ A;  1ZPE A;  4GSV A;  4IU1 A;  1WVB A;  1WOH A;  1HQH A;  3GN0 A;  4GSZ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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