1T7QA

Crystal structure of the f565a mutant of murine carnitine acetyltransferase in complex with carnitine and coa
Total Genus 220
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
220
sequence length
599
structure length
599
Chain Sequence
b'SHMAHQDALPRLPVPPLQQSLDYYLKALQPIVSEEEWAHTKQLVDEFQTSGGVGERLQKGLERRAKKMENWLSEWWLKTAYLQFRQPVVIYSSPGVILPKQDFVDLQGQLRFAAKLIEGVLDFKSMIDNETLPVEFLGGQPLCMNQYYQILSSCRVPGPKQDSVVNFLKSKRPPTHITVVHNYQFFELDVYHSDGTPLTSDQIFVQLEKIWNSSLQSNKEPVGILTSNHRNTWAKAYNNLIKDKVNRESVNSIQKSIFTVCLDKQVPRVSDDVYRNHVAGQMLHGGGSKFNSGNRWFDKTLQFIVAEDGSCGMVYEHAAAEGPPIVALVDHVMEYTKKPELVRSPMVPLPMPKKLRFNITPEIKNDIEKAKQNLSIMIQDLDIMMLTFHHFGKDFPKSEKLSPDAFIQVALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASIDSLAFVKGMGDSTVPEQQKVELLRKAVQAHRAYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMAFGPVVPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNHPRAK'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Carnitine acetyltransferase
publication title Structural and biochemical studies of the substrate selectivity of carnitine acetyltransferase
pubmed doi rcsb
source organism Mus musculus
molecule tags Transferase
total genus 220
structure length 599
sequence length 599
chains with identical sequence B
ec nomenclature ec 2.3.1.7: Carnitine O-acetyltransferase.
pdb deposition date 2004-05-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00755 Carn_acyltransf Choline/Carnitine o-acyltransferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.40 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 1t7qA01
3.30.559.70 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 1t7qA02
1S5OA 2FY4A 1NDIA 2H3UA 4EYWA 2FY2A 2H4TA 2FW3A 1T1UA 2FY3A 2FYOA 2RCUA 1T7OA 1T7QA 1T7NA 2H3PA 2H3WA 2DEBA 2FY5A 1NM8A 1Q6XA 4EPHA 4EP9A 1NDBA 1NDFA
chains in the Genus database with same CATH superfamily
2II4A 5FALA 1PD5A 1S5OA 2II3A 2XHGA 4EYWA 2FY2A 5KJTA 5KJWA 1T1UA 2RCUA 2IHWA 1T7QA 3CLAA 2H3WA 2ZBAA 3B30A 1DPBA 5DUAA 2VSQA 5DU9A 1XMDA 2DEBA 4EP9A 3B2SA 5T3EA 5KJUA 2FY4A 1NDIA 1EADA 4KE4A 4JN3A 2H4TA 3FOTA 1EAFA 2FY3A 4G2MA 1EAEA 1XL8A 2RKTA 1EAAA 5FANA 1T7NA 2H3PA 4CLAA 1SCZA 1C4TA 4KECA 2CLAA 3U9FA 4JN5A 1E2OA 3FP0A 2XR7A 4G22A 1NOCB 2FYOA 1DPCA 1XL7A 2E1VA 1T7OA 1L5AA 2I9DA 1XMCA 3L60A 5KJSA 1CLAA 4EPHA 1DPDA 3MAEA 1EACA 1Q9JA 2BGHA 2H3UA 1Q23A 2FW3A 4N72A 2JGPA 4G0BA 3U9BA 2RKVA 5KJVA 2II5A 1EABA 2FY5A 1NM8A 4HVMA 1QCAA 1Q6XA 1NDBA 1NDFA 1CIAA 2E1UA 2E1TA
chains in the Genus database with same CATH topology
1S5OA 2FY4A 1NDIA 1Q9JA 3FP0A 2H3UA 2XHGA 4EYWA 2FY2A 4JN3A 2H4TA 2FW3A 3FOTA 1T1UA 2FY3A 2FYOA 2RCUA 2JGPA 1T7OA 1T7QA 1T7NA 1L5AA 2H3PA 2H3WA 5DUAA 2VSQA 5DU9A 2DEBA 2FY5A 1NM8A 4HVMA 1Q6XA 4EPHA 4JN5A 4EP9A 1NDBA 1NDFA 5T3EA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1S5O A;  2FY4 A;  1NDI A;  2H3U A;  4EYW A;  2FY2 A;  2H4T A;  2FW3 A;  1T1U A;  2FY3 A;  2FYO A;  2RCU A;  1T7O A;  1T7Q A;  1T7N A;  2H3P A;  2H3W A;  2DEB A;  2FY5 A;  1NM8 A;  1Q6X A;  4EPH A;  4EP9 A;  1NDB A;  1NDF A; 
#chains in the Genus database with same CATH topology
 2II4 A;  5FAL A;  1PD5 A;  1S5O A;  2II3 A;  2XHG A;  4EYW A;  2FY2 A;  5KJT A;  5KJW A;  1T1U A;  2RCU A;  2IHW A;  1T7Q A;  3CLA A;  2H3W A;  2ZBA A;  3B30 A;  1DPB A;  5DUA A;  2VSQ A;  5DU9 A;  1XMD A;  2DEB A;  4EP9 A;  3B2S A;  5T3E A;  5KJU A;  2FY4 A;  1NDI A;  1EAD A;  4KE4 A;  4JN3 A;  2H4T A;  3FOT A;  1EAF A;  2FY3 A;  4G2M A;  1EAE A;  1XL8 A;  2RKT A;  1EAA A;  5FAN A;  1T7N A;  2H3P A;  4CLA A;  1SCZ A;  1C4T A;  4KEC A;  2CLA A;  3U9F A;  4JN5 A;  1E2O A;  3FP0 A;  2XR7 A;  4G22 A;  1NOC B;  2FYO A;  1DPC A;  1XL7 A;  2E1V A;  1T7O A;  1L5A A;  2I9D A;  1XMC A;  3L60 A;  5KJS A;  1CLA A;  4EPH A;  1DPD A;  3MAE A;  1EAC A;  1Q9J A;  2BGH A;  2H3U A;  1Q23 A;  2FW3 A;  4N72 A;  2JGP A;  4G0B A;  3U9B A;  2RKV A;  5KJV A;  2II5 A;  1EAB A;  2FY5 A;  1NM8 A;  4HVM A;  1QCA A;  1Q6X A;  1NDB A;  1NDF A;  1CIA A;  2E1U A;  2E1T A; 
#chains in the Genus database with same CATH homology
 1S5O A;  2FY4 A;  1NDI A;  1Q9J A;  3FP0 A;  2H3U A;  2XHG A;  4EYW A;  2FY2 A;  4JN3 A;  2H4T A;  2FW3 A;  3FOT A;  1T1U A;  2FY3 A;  2FYO A;  2RCU A;  2JGP A;  1T7O A;  1T7Q A;  1T7N A;  1L5A A;  2H3P A;  2H3W A;  5DUA A;  2VSQ A;  5DU9 A;  2DEB A;  2FY5 A;  1NM8 A;  4HVM A;  1Q6X A;  4EPH A;  4JN5 A;  4EP9 A;  1NDB A;  1NDF A;  5T3E A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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