1T7QA

Crystal structure of the f565a mutant of murine carnitine acetyltransferase in complex with carnitine and coa
Total Genus 220
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
220
sequence length
599
structure length
599
Chain Sequence
SHMAHQDALPRLPVPPLQQSLDYYLKALQPIVSEEEWAHTKQLVDEFQTSGGVGERLQKGLERRAKKMENWLSEWWLKTAYLQFRQPVVIYSSPGVILPKQDFVDLQGQLRFAAKLIEGVLDFKSMIDNETLPVEFLGGQPLCMNQYYQILSSCRVPGPKQDSVVNFLKSKRPPTHITVVHNYQFFELDVYHSDGTPLTSDQIFVQLEKIWNSSLQSNKEPVGILTSNHRNTWAKAYNNLIKDKVNRESVNSIQKSIFTVCLDKQVPRVSDDVYRNHVAGQMLHGGGSKFNSGNRWFDKTLQFIVAEDGSCGMVYEHAAAEGPPIVALVDHVMEYTKKPELVRSPMVPLPMPKKLRFNITPEIKNDIEKAKQNLSIMIQDLDIMMLTFHHFGKDFPKSEKLSPDAFIQVALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASIDSLAFVKGMGDSTVPEQQKVELLRKAVQAHRAYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMAFGPVVPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNHPRAK
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
molecule keywords Carnitine acetyltransferase
publication title Structural and biochemical studies of the substrate selectivity of carnitine acetyltransferase
pubmed doi rcsb
source organism Mus musculus
total genus 220
structure length 599
sequence length 599
chains with identical sequence B
ec nomenclature ec 2.3.1.7: Carnitine O-acetyltransferase.
pdb deposition date 2004-05-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00755 Carn_acyltransf Choline/Carnitine o-acyltransferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.40 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 1t7qA01
3.30.559.70 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 1t7qA02
2FY4A 1T7NA 2H3UA 1Q6XA 2RCUA 2FYOA 1NM8A 1T7QA 2H3PA 2FY2A 1T1UA 1NDFA 2H4TA 2FW3A 1NDIA 4EPHA 1S5OA 2H3WA 1T7OA 1NDBA 2FY3A 4EYWA 2DEBA 4EP9A 2FY5A
chains in the Genus database with same CATH superfamily
2FY4A 1T7NA 1XMDA 5DU9A 1Q6XA 2RCUA 2FYOA 3U9BA 1EAFA 1Q9JA 2I9DA 5KJWA 5KJTA 2E1TA 3MAEA 1SCZA 2FW3A 2XR7A 1NDIA 1CLAA 2CLAA 1XMCA 1NDBA 2II3A 2RKTA 1CIAA 3FOTA 2ZBAA 2JGPA 1XL7A 2RKVA 2II5A 1T7QA 4G2MA 3B30A 5FALA 2FY2A 2H4TA 5FANA 3L60A 1EAEA 2IHWA 5KJUA 1T7OA 1DPCA 3B2SA 2E1VA 4EYWA 2II4A 4KE4A 1QCAA 5KJSA 1E2OA 1Q23A 2H3UA 3CLAA 1EADA 2E1UA 1NM8A 1EABA 1DPDA 1C4TA 4G22A 3FP0A 5KJVA 1L5AA 1PD5A 3U9FA 1NDFA 1EAAA 1DPBA 4EPHA 1S5OA 4JN3A 2H3WA 2XHGA 2FY3A 4CLAA 2DEBA 4EP9A 2FY5A 5T3EA 4G0BA 4HVMA 2H3PA 2VSQA 4KECA 1XL8A 1T1UA 4N72A 1NOCB 1EACA 4JN5A 5DUAA 2BGHA
chains in the Genus database with same CATH topology
2FY4A 1T7NA 5DU9A 3FOTA 2H3UA 1Q6XA 2RCUA 2FYOA 1Q9JA 2JGPA 4HVMA 1NM8A 1T7QA 2H3PA 2VSQA 3FP0A 2FY2A 1L5AA 1T1UA 1NDFA 2H4TA 2FW3A 1NDIA 4EPHA 1S5OA 4JN3A 2H3WA 4JN5A 2XHGA 5DUAA 1T7OA 1NDBA 2FY3A 4EYWA 2DEBA 4EP9A 2FY5A 5T3EA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2FY4 A;  1T7N A;  2H3U A;  1Q6X A;  2RCU A;  2FYO A;  1NM8 A;  1T7Q A;  2H3P A;  2FY2 A;  1T1U A;  1NDF A;  2H4T A;  2FW3 A;  1NDI A;  4EPH A;  1S5O A;  2H3W A;  1T7O A;  1NDB A;  2FY3 A;  4EYW A;  2DEB A;  4EP9 A;  2FY5 A; 
#chains in the Genus database with same CATH topology
 2FY4 A;  1T7N A;  1XMD A;  5DU9 A;  1Q6X A;  2RCU A;  2FYO A;  3U9B A;  1EAF A;  1Q9J A;  2I9D A;  5KJW A;  5KJT A;  2E1T A;  3MAE A;  1SCZ A;  2FW3 A;  2XR7 A;  1NDI A;  1CLA A;  2CLA A;  1XMC A;  1NDB A;  2II3 A;  2RKT A;  1CIA A;  3FOT A;  2ZBA A;  2JGP A;  1XL7 A;  2RKV A;  2II5 A;  1T7Q A;  4G2M A;  3B30 A;  5FAL A;  2FY2 A;  2H4T A;  5FAN A;  3L60 A;  1EAE A;  2IHW A;  5KJU A;  1T7O A;  1DPC A;  3B2S A;  2E1V A;  4EYW A;  2II4 A;  4KE4 A;  1QCA A;  5KJS A;  1E2O A;  1Q23 A;  2H3U A;  3CLA A;  1EAD A;  2E1U A;  1NM8 A;  1EAB A;  1DPD A;  1C4T A;  4G22 A;  3FP0 A;  5KJV A;  1L5A A;  1PD5 A;  3U9F A;  1NDF A;  1EAA A;  1DPB A;  4EPH A;  1S5O A;  4JN3 A;  2H3W A;  2XHG A;  2FY3 A;  4CLA A;  2DEB A;  4EP9 A;  2FY5 A;  5T3E A;  4G0B A;  4HVM A;  2H3P A;  2VSQ A;  4KEC A;  1XL8 A;  1T1U A;  4N72 A;  1NOC B;  1EAC A;  4JN5 A;  5DUA A;  2BGH A; 
#chains in the Genus database with same CATH homology
 2FY4 A;  1T7N A;  5DU9 A;  3FOT A;  2H3U A;  1Q6X A;  2RCU A;  2FYO A;  1Q9J A;  2JGP A;  4HVM A;  1NM8 A;  1T7Q A;  2H3P A;  2VSQ A;  3FP0 A;  2FY2 A;  1L5A A;  1T1U A;  1NDF A;  2H4T A;  2FW3 A;  1NDI A;  4EPH A;  1S5O A;  4JN3 A;  2H3W A;  4JN5 A;  2XHG A;  5DUA A;  1T7O A;  1NDB A;  2FY3 A;  4EYW A;  2DEB A;  4EP9 A;  2FY5 A;  5T3E A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...