1T7QA

Crystal structure of the f565a mutant of murine carnitine acetyltransferase in complex with carnitine and coa
Total Genus 220
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
220
sequence length
599
structure length
599
Chain Sequence
b'SHMAHQDALPRLPVPPLQQSLDYYLKALQPIVSEEEWAHTKQLVDEFQTSGGVGERLQKGLERRAKKMENWLSEWWLKTAYLQFRQPVVIYSSPGVILPKQDFVDLQGQLRFAAKLIEGVLDFKSMIDNETLPVEFLGGQPLCMNQYYQILSSCRVPGPKQDSVVNFLKSKRPPTHITVVHNYQFFELDVYHSDGTPLTSDQIFVQLEKIWNSSLQSNKEPVGILTSNHRNTWAKAYNNLIKDKVNRESVNSIQKSIFTVCLDKQVPRVSDDVYRNHVAGQMLHGGGSKFNSGNRWFDKTLQFIVAEDGSCGMVYEHAAAEGPPIVALVDHVMEYTKKPELVRSPMVPLPMPKKLRFNITPEIKNDIEKAKQNLSIMIQDLDIMMLTFHHFGKDFPKSEKLSPDAFIQVALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASIDSLAFVKGMGDSTVPEQQKVELLRKAVQAHRAYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMAFGPVVPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNHPRAK'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Structural and biochemical studies of the substrate selectivity of carnitine acetyltransferase
pubmed doi rcsb
molecule keywords Carnitine acetyltransferase
source organism Mus musculus
molecule tags Transferase
total genus 220
structure length 599
sequence length 599
chains with identical sequence B
ec nomenclature ec 2.3.1.7: Carnitine O-acetyltransferase.
pdb deposition date 2004-05-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00755 Carn_acyltransf Choline/Carnitine o-acyltransferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.40 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 1t7qA01
3.30.559.70 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 1t7qA02
1T7NA 1NDBA 1S5OA 1Q6XA 1T7QA 2FW3A 2H3WA 1NM8A 1T1UA 1T7OA 2FY3A 1NDIA 2RCUA 2H3PA 2FY2A 2FYOA 4EP9A 1NDFA 2H3UA 2DEBA 2H4TA 4EYWA 2FY4A 2FY5A 4EPHA
chains in the Genus database with same CATH superfamily
2RKVA 1T7NA 4G22A 1Q6XA 1CIAA 3FP0A 5DU9A 1C4TA 4JN5A 2I9DA 1PD5A 1DPDA 2H3UA 1XL7A 1XL8A 2DEBA 2H4TA 1L5AA 2JGPA 4EYWA 3MAEA 3FOTA 2FY5A 3CLAA 2IHWA 1CLAA 5FALA 2II3A 4HVMA 1S5OA 2BGHA 2E1TA 4N72A 3B30A 4G0BA 3L60A 2II5A 2RCUA 1DPBA 1EADA 2FY2A 1XMDA 4KECA 1NOCB 4EP9A 1NDFA 1EAAA 1QCAA 5T3EA 4EPHA 1Q9JA 2II4A 5KJVA 1T7QA 2H3WA 1EACA 5KJUA 1NM8A 1T1UA 2CLAA 1T7OA 4CLAA 1EAFA 5KJSA 2VSQA 2E1UA 2E1VA 4G2MA 2H3PA 3U9FA 1E2OA 5KJTA 2FYOA 1EAEA 2ZBAA 1XMCA 4KE4A 1DPCA 5FANA 1EABA 1NDBA 2FW3A 1Q23A 2XHGA 1SCZA 2FY3A 2XR7A 5KJWA 1NDIA 5DUAA 3U9BA 2RKTA 4JN3A 3B2SA 2FY4A
chains in the Genus database with same CATH topology
1T7NA 1NDBA 4HVMA 1S5OA 1Q6XA 1T7QA 2FW3A 2H3WA 3FP0A 2XHGA 5DU9A 1NM8A 1T1UA 1T7OA 4JN5A 2VSQA 2FY3A 1NDIA 2RCUA 2H3PA 5DUAA 2FY2A 2FYOA 4EP9A 1NDFA 2H3UA 2DEBA 2H4TA 1L5AA 4JN3A 2JGPA 5T3EA 4EYWA 2FY4A 3FOTA 2FY5A 4EPHA 1Q9JA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1T7N A;  1NDB A;  1S5O A;  1Q6X A;  1T7Q A;  2FW3 A;  2H3W A;  1NM8 A;  1T1U A;  1T7O A;  2FY3 A;  1NDI A;  2RCU A;  2H3P A;  2FY2 A;  2FYO A;  4EP9 A;  1NDF A;  2H3U A;  2DEB A;  2H4T A;  4EYW A;  2FY4 A;  2FY5 A;  4EPH A; 
#chains in the Genus database with same CATH topology
 2RKV A;  1T7N A;  4G22 A;  1Q6X A;  1CIA A;  3FP0 A;  5DU9 A;  1C4T A;  4JN5 A;  2I9D A;  1PD5 A;  1DPD A;  2H3U A;  1XL7 A;  1XL8 A;  2DEB A;  2H4T A;  1L5A A;  2JGP A;  4EYW A;  3MAE A;  3FOT A;  2FY5 A;  3CLA A;  2IHW A;  1CLA A;  5FAL A;  2II3 A;  4HVM A;  1S5O A;  2BGH A;  2E1T A;  4N72 A;  3B30 A;  4G0B A;  3L60 A;  2II5 A;  2RCU A;  1DPB A;  1EAD A;  2FY2 A;  1XMD A;  4KEC A;  1NOC B;  4EP9 A;  1NDF A;  1EAA A;  1QCA A;  5T3E A;  4EPH A;  1Q9J A;  2II4 A;  5KJV A;  1T7Q A;  2H3W A;  1EAC A;  5KJU A;  1NM8 A;  1T1U A;  2CLA A;  1T7O A;  4CLA A;  1EAF A;  5KJS A;  2VSQ A;  2E1U A;  2E1V A;  4G2M A;  2H3P A;  3U9F A;  1E2O A;  5KJT A;  2FYO A;  1EAE A;  2ZBA A;  1XMC A;  4KE4 A;  1DPC A;  5FAN A;  1EAB A;  1NDB A;  2FW3 A;  1Q23 A;  2XHG A;  1SCZ A;  2FY3 A;  2XR7 A;  5KJW A;  1NDI A;  5DUA A;  3U9B A;  2RKT A;  4JN3 A;  3B2S A;  2FY4 A; 
#chains in the Genus database with same CATH homology
 1T7N A;  1NDB A;  4HVM A;  1S5O A;  1Q6X A;  1T7Q A;  2FW3 A;  2H3W A;  3FP0 A;  2XHG A;  5DU9 A;  1NM8 A;  1T1U A;  1T7O A;  4JN5 A;  2VSQ A;  2FY3 A;  1NDI A;  2RCU A;  2H3P A;  5DUA A;  2FY2 A;  2FYO A;  4EP9 A;  1NDF A;  2H3U A;  2DEB A;  2H4T A;  1L5A A;  4JN3 A;  2JGP A;  5T3E A;  4EYW A;  2FY4 A;  3FOT A;  2FY5 A;  4EPH A;  1Q9J A; 
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