The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
16
|
sequence length |
60
|
structure length |
60
|
Chain Sequence |
RICYSHKASLPRATKTCVENTCYKMFIRTHREYISERGCGCPTAMWPYQTECCKGDRCNK
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| publication title |
NMR and restrained molecular dynamics study of the three-dimensional solution structure of toxin FS2, a specific blocker of the L-type calcium channel, isolated from black mamba venom.
pubmed doi rcsb |
| molecule keywords |
TOXIN FS2
|
| molecule tags |
Toxin
|
| source organism |
Dendroaspis polylepis polylepis
|
| total genus |
16
|
| structure length |
60
|
| sequence length |
60
|
| ec nomenclature | |
| pdb deposition date | 1995-01-26 |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Mainly Beta | Ribbon | CD59 | CD59 |
#chains in the Genus database with same CATH superfamily 2CTX A; 1CDR A; 1CB9 A; 2H62 C; 2GOO C; 1ERA A; 3BT1 U; 2GOO B; 2H7Z A; 1FRA A; 1M9Z A; 3NH7 A; 4FAO C; 1TGX A; 1IDI A; 2CRT A; 1KS6 A; 3VTS A; 4LFT A; 5DZ5 A; 3BT2 U; 3ERA A; 4EY8 B; 1ZAD A; 1JE9 A; 2ERA A; 1PLO A; 2K3G A; 2QJB C; 1B41 B; 1HC9 A; 1I02 A; 1NXB A; 5DO6 A; 1ONJ A; 1G6M A; 2NBT A; 1ES7 B; 2UX2 A; 1NEA A; 1MAH F; 2MUP A; 3EVS C; 6EBX A; 4XJJ A; 4BIK B; 1DRS A; 1JGK A; 1CHV S; 1V6P A; 1CCQ A; 2CCX A; 1HAJ A; 2MFA A; 2MJ0 A; 2N99 A; 1RGJ A; 1F8U B; 1QM7 A; 3KFD E; 4AEA A; 3U74 U; 2HLR A; 1FSS B; 2MHY A; 1MR6 A; 1CRF A; 2QC1 A; 1IK8 A; 1FFJ A; 1CRE A; 1VB0 A; 1CVO A; 2HLQ A; 2L03 A; 2UWR A; 1CXN A; 1H0J A; 1IDL A; 2LA1 A; 2QJA C; 1S4Y A; 1UG4 A; 1FF4 A; 3QB4 B; 3HH7 A; 3U73 U; 3EBX A; 1XT3 A; 4QTI U; 1NTN A; 1CTX A; 2X8B B; 2JVE A; 1TFS A; 2MJY A; 1CDQ A; 1IKC A; 1QKD A; 1IDH A; 1KTZ B; 1HAA A; 2PJY C; 1RL5 A; 2L5S A; 2OFS A; 2QJ9 C; 1QKE A; 2CRS A; 2J8B A; 1F94 A; 2H5F A; 2ABX A; 1FAS A; 1TXB A; 1IDG A; 2H7Z B; 1YWH A; 5IMY C; 4RUD A; 4FAO E; 1KBT A; 1LXH A; 1ERG A; 3PLC A; 4OM4 A; 4OM5 A; 2H62 D; 3FEV A; 2VLW A; 4HQP F; 1KL8 A; 1KU6 B; 2JQP A; 1W6B A; 1FSC A; 1BTE A; 1LXG A; 1HC9 B; 1KXI A; 1CXO A; 1HOY A; 3LAQ U; 4UY2 C; 4ZQY A; 1ABT A; 1BXP A; 3KFD I; 5EBX A; 1NOR A; 1KBS A; 1KBA A; 4P7U A; 1TXA A; 4DO8 A; 5IMT D; 1IJC A; 1IQ9 A; 2PJY B; 1CDS A; 2LCR A; 1NYU A; 3NDS A; 2CDX A; 5DU1 A; 2MUO A; 1KC4 A; 4BDT B; 2MJ4 A; 2BHI A; 1CDT A; 1KFH A; 2H64 C; 2H64 B; 1LSI A; 1NTX A; 1COE A; 1LJZ A; 1JBD A; 1REW C; 1L4W A; 2BTX A; 1LX5 B; 4IYE A; 1NYS A; 3NEQ A; 2I9B E; 1COD A; 2FD6 U; 2H8U A; #chains in the Genus database with same CATH topology 2CTX A; 1CDR A; 1CB9 A; 2H62 C; 2GOO C; 1ERA A; 3BT1 U; 2GOO B; 2H7Z A; 1FRA A; 1M9Z A; 3NH7 A; 4FAO C; 1TGX A; 1IDI A; 2CRT A; 1KS6 A; 3VTS A; 4LFT A; 5DZ5 A; 3BT2 U; 3ERA A; 4EY8 B; 1ZAD A; 1JE9 A; 2ERA A; 1PLO A; 2K3G A; 2QJB C; 1B41 B; 1HC9 A; 1I02 A; 1NXB A; 5DO6 A; 1ONJ A; 1G6M A; 2NBT A; 1ES7 B; 2UX2 A; 1NEA A; 1MAH F; 2MUP A; 3EVS C; 6EBX A; 4XJJ A; 4BIK B; 1DRS A; 1JGK A; 1CHV S; 1V6P A; 1CCQ A; 2CCX A; 1HAJ A; 2MFA A; 2MJ0 A; 2N99 A; 1RGJ A; 1F8U B; 1QM7 A; 3KFD E; 4AEA A; 3U74 U; 2HLR A; 1FSS B; 2MHY A; 1MR6 A; 1CRF A; 2QC1 A; 1IK8 A; 1FFJ A; 1CRE A; 1VB0 A; 1CVO A; 2HLQ A; 2L03 A; 2UWR A; 1CXN A; 1H0J A; 1IDL A; 2LA1 A; 4KSN A; 2QJA C; 1S4Y A; 1UG4 A; 1FF4 A; 3QB4 B; 3HH7 A; 3U73 U; 3EBX A; 1XT3 A; 4QTI U; 1NTN A; 1CTX A; 2X8B B; 2JVE A; 1TFS A; 2MJY A; 1CDQ A; 1IKC A; 1QKD A; 1IDH A; 1KTZ B; 1HAA A; 2PJY C; 1RL5 A; 2L5S A; 2OFS A; 2QJ9 C; 1QKE A; 2CRS A; 2J8B A; 1F94 A; 2H5F A; 2ABX A; 1FAS A; 1TXB A; 1IDG A; 2H7Z B; 1YWH A; 5IMY C; 4RUD A; 4FAO E; 1KBT A; 1LXH A; 1ERG A; 3PLC A; 4OM4 A; 4OM5 A; 2H62 D; 3FEV A; 2VLW A; 4HQP F; 1KL8 A; 1KU6 B; 2JQP A; 1W6B A; 1FSC A; 1BTE A; 1LXG A; 1HC9 B; 1KXI A; 1CXO A; 1HOY A; 3LAQ U; 4UY2 C; 4ZQY A; 1ABT A; 1BXP A; 3KFD I; 5EBX A; 1NOR A; 1KBS A; 1KBA A; 4P7U A; 1TXA A; 4DO8 A; 5IMT D; 1IJC A; 1IQ9 A; 2PJY B; 1CDS A; 2LCR A; 1NYU A; 3NDS A; 2CDX A; 5DU1 A; 2MUO A; 1KC4 A; 4BDT B; 2MJ4 A; 2BHI A; 1CDT A; 1KFH A; 2H64 C; 2H64 B; 1LSI A; 1NTX A; 1COE A; 1LJZ A; 1JBD A; 1REW C; 1L4W A; 2BTX A; 1LX5 B; 4IYE A; 1NYS A; 3NEQ A; 2I9B E; 1COD A; 2FD6 U; 2H8U A; #chains in the Genus database with same CATH homology 2CTX A; 1CDR A; 1CB9 A; 2H62 C; 2GOO C; 1ERA A; 3BT1 U; 2GOO B; 2H7Z A; 1FRA A; 1M9Z A; 3NH7 A; 4FAO C; 1TGX A; 1IDI A; 2CRT A; 1KS6 A; 3VTS A; 4LFT A; 5DZ5 A; 3BT2 U; 3ERA A; 4EY8 B; 1ZAD A; 1JE9 A; 2ERA A; 1PLO A; 2K3G A; 2QJB C; 1B41 B; 1HC9 A; 1I02 A; 1NXB A; 5DO6 A; 1ONJ A; 1G6M A; 2NBT A; 1ES7 B; 2UX2 A; 1NEA A; 1MAH F; 2MUP A; 3EVS C; 6EBX A; 4XJJ A; 4BIK B; 1DRS A; 1JGK A; 1CHV S; 1V6P A; 1CCQ A; 2CCX A; 1HAJ A; 2MFA A; 2MJ0 A; 2N99 A; 1RGJ A; 1F8U B; 1QM7 A; 3KFD E; 4AEA A; 3U74 U; 2HLR A; 1FSS B; 2MHY A; 1MR6 A; 1CRF A; 2QC1 A; 1IK8 A; 1FFJ A; 1CRE A; 1VB0 A; 1CVO A; 2HLQ A; 2L03 A; 2UWR A; 1CXN A; 1H0J A; 1IDL A; 2LA1 A; 4KSN A; 2QJA C; 1S4Y A; 1UG4 A; 1FF4 A; 3QB4 B; 3HH7 A; 3U73 U; 3EBX A; 1XT3 A; 4QTI U; 1NTN A; 1CTX A; 2X8B B; 2JVE A; 1TFS A; 2MJY A; 1CDQ A; 1IKC A; 1QKD A; 1IDH A; 1KTZ B; 1HAA A; 2PJY C; 1RL5 A; 2L5S A; 2OFS A; 2QJ9 C; 1QKE A; 2CRS A; 2J8B A; 1F94 A; 2H5F A; 2ABX A; 1FAS A; 1TXB A; 1IDG A; 2H7Z B; 1YWH A; 5IMY C; 4RUD A; 4FAO E; 1KBT A; 1LXH A; 1ERG A; 3PLC A; 4OM4 A; 4OM5 A; 2H62 D; 3FEV A; 2VLW A; 4HQP F; 1KL8 A; 1KU6 B; 2JQP A; 1W6B A; 1FSC A; 1BTE A; 1LXG A; 1HC9 B; 1KXI A; 1CXO A; 1HOY A; 3LAQ U; 4UY2 C; 4ZQY A; 1ABT A; 1BXP A; 3KFD I; 5EBX A; 1NOR A; 1KBS A; 1KBA A; 4P7U A; 1TXA A; 4DO8 A; 5IMT D; 1IJC A; 1IQ9 A; 2PJY B; 1CDS A; 2LCR A; 1NYU A; 3NDS A; 2CDX A; 5DU1 A; 2MUO A; 1KC4 A; 4BDT B; 2MJ4 A; 2BHI A; 1CDT A; 1KFH A; 2H64 C; 2H64 B; 1LSI A; 1NTX A; 1COE A; 1LJZ A; 1JBD A; 1REW C; 1L4W A; 2BTX A; 1LX5 B; 4IYE A; 1NYS A; 3NEQ A; 2I9B E; 1COD A; 2FD6 U; 2H8U A;
#similar chains in the Genus database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
