1U14A

The crystal structure of hypothetical upf0244 protein yjjx at resolution 1.68 angstrom
Total Genus 56
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
56
sequence length
169
structure length
169
Chain Sequence
AMHQVISATTNPAKIQAILQAFEEIFGEGSCHITPVAVESGVPEQPFGSEETRAGARNRVDNARRLHPQADFWVAIEAGIDDDATFSWVVIDNGVQRGEARSATLPLPAVILDRVRQGEALGPVMSQYTGIDEIGRKEGAIGVFTAGKLTRSSVYYQAVILALSPFHNA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Structural genomics
molecule keywords Hypothetical UPF0244 protein yjjX
publication title The crystal structure of hypothetical UPF0244 protein yjjX at resolution 1.68 Angstrom
rcsb
source organism Salmonella typhimurium
total genus 56
structure length 169
sequence length 169
ec nomenclature
pdb deposition date 2004-07-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01931 NTPase_I-T Protein of unknown function DUF84
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.950.10 Alpha Beta Alpha-Beta Complex Maf protein Maf protein 1u14A00
1B78A 4OO0A 1ZWYA 4P0UA 2PYUA 2AMHA 2Q16A 2I5DA 1U5WA 2E5XA 4P0EA 4LU1A 1V7RA 2DVNA 2J4EA 3S86A 2P5XA 2ZTIA 4F95A 3TQUA 1EXCA 1EX2A 1U14A 1K7KA 1ZNOA 4HEBA 4JHCA 2MJPA 2DVOA 2CARA 1VP2A 4BNQA 2DVPA
chains in the Genus database with same CATH superfamily
1B78A 4OO0A 1ZWYA 4P0UA 2PYUA 2AMHA 2Q16A 2I5DA 1U5WA 2A9SA 2E5XA 4P0EA 4LU1A 1V7RA 2DVNA 4CT8A 4UUWA 2J4EA 3S86A 2P5XA 2ZTIA 4F95A 3TQUA 1EXCA 4UUXA 1EX2A 1U14A 4UOCA 5KVKA 1K7KA 1ZNOA 4HEBA 4JHCA 4CT9A 2MJPA 4CTAA 2DVOA 2CARA 1VP2A 5KOLA 4BNQA 4CTAB 2DVPA
chains in the Genus database with same CATH topology
1B78A 4OO0A 1ZWYA 4P0UA 2PYUA 2AMHA 2Q16A 2I5DA 1U5WA 2E5XA 4P0EA 4LU1A 1V7RA 2DVNA 2J4EA 3S86A 2P5XA 2ZTIA 4F95A 3TQUA 1EXCA 1EX2A 1U14A 1K7KA 1ZNOA 4HEBA 4JHCA 2MJPA 2DVOA 2CARA 1VP2A 4BNQA 2DVPA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1B78 A;  4OO0 A;  1ZWY A;  4P0U A;  2PYU A;  2AMH A;  2Q16 A;  2I5D A;  1U5W A;  2E5X A;  4P0E A;  4LU1 A;  1V7R A;  2DVN A;  2J4E A;  3S86 A;  2P5X A;  2ZTI A;  4F95 A;  3TQU A;  1EXC A;  1EX2 A;  1U14 A;  1K7K A;  1ZNO A;  4HEB A;  4JHC A;  2MJP A;  2DVO A;  2CAR A;  1VP2 A;  4BNQ A;  2DVP A; 
#chains in the Genus database with same CATH topology
 1B78 A;  4OO0 A;  1ZWY A;  4P0U A;  2PYU A;  2AMH A;  2Q16 A;  2I5D A;  1U5W A;  2A9S A;  2E5X A;  4P0E A;  4LU1 A;  1V7R A;  2DVN A;  4CT8 A;  4UUW A;  2J4E A;  3S86 A;  2P5X A;  2ZTI A;  4F95 A;  3TQU A;  1EXC A;  4UUX A;  1EX2 A;  1U14 A;  4UOC A;  5KVK A;  1K7K A;  1ZNO A;  4HEB A;  4JHC A;  4CT9 A;  2MJP A;  4CTA A;  2DVO A;  2CAR A;  1VP2 A;  5KOL A;  4BNQ A;  4CTA B;  2DVP A; 
#chains in the Genus database with same CATH homology
 1B78 A;  4OO0 A;  1ZWY A;  4P0U A;  2PYU A;  2AMH A;  2Q16 A;  2I5D A;  1U5W A;  2E5X A;  4P0E A;  4LU1 A;  1V7R A;  2DVN A;  2J4E A;  3S86 A;  2P5X A;  2ZTI A;  4F95 A;  3TQU A;  1EXC A;  1EX2 A;  1U14 A;  1K7K A;  1ZNO A;  4HEB A;  4JHC A;  2MJP A;  2DVO A;  2CAR A;  1VP2 A;  4BNQ A;  2DVP A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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