1UTRA

Uteroglobin-pcb complex (reduced form)
Total Genus 14
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
14
sequence length
68
structure length
68
Chain Sequence
ICPGFLQVLEALLLGSESNYEAALKPFNPASDLQNAGTQLKRLVDTLPQETRINIVKLTEKILTSPLC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Mammalian pcb-binding protein
molecule keywords UTEROGLOBIN
publication title Solution structure of a mammalian PCB-binding protein in complex with a PCB.
pubmed doi rcsb
source organism Rattus norvegicus
total genus 14
structure length 68
sequence length 68
chains with identical sequence B
ec nomenclature
pdb deposition date 1995-09-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01099 Uteroglobin Uteroglobin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.210.10 Mainly Alpha Orthogonal Bundle Uteroglobin Secretoglobin 1utrA00
2UTGA 1UTGA 1UTRA 1CCDA
chains in the Genus database with same CATH superfamily
2UTGA 2WJ3A 2WM2A 1UTRA 2WJ6A 3IBTA 2WJ4A 4CFSA 1UTGA 1CCDA
chains in the Genus database with same CATH topology
2UTGA 1UTGA 1UTRA 1CCDA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2UTG A;  1UTG A;  1UTR A;  1CCD A; 
#chains in the Genus database with same CATH topology
 2UTG A;  2WJ3 A;  2WM2 A;  1UTR A;  2WJ6 A;  3IBT A;  2WJ4 A;  4CFS A;  1UTG A;  1CCD A; 
#chains in the Genus database with same CATH homology
 2UTG A;  1UTG A;  1UTR A;  1CCD A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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