1VRAA

Crystal structure of arginine biosynthesis bifunctional protein argj (10175521) from bacillus halodurans at 2.00 a resolution
Total Genus 53
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
53
sequence length
191
structure length
191
Chain Sequence
ETANVLKLETGSVTSAKGFSAVGIHTGVKRKRKDLGAIVCEVPASSAAVYTLNKVQAAPLKVTQESIAVEGKLQAMIVNSGIANACTGKRGLDDAYTMRAVGAETFHIPEHYVAVTSTGVIGEFLPMDVITNGIRQLKPEATIEGAHAFNEAILTTDTVEKHTCYQTIVNGKTVTVGGVAKGSGMIHPNMA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Arginine biosynthesis bifunctional protein argJ
publication title Crystal structure of Arginine biosynthesis bifunctional protein argJ (10175521) from Bacillus halodurans at 2.00 A resolution
rcsb
source organism Bacillus halodurans
total genus 53
structure length 191
sequence length 191
ec nomenclature ec 2.3.1.1: Amino-acid N-acetyltransferase.
pdb deposition date 2005-02-17
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.70.12 Alpha Beta 4-Layer Sandwich L-amino peptidase D-ALA esterase/amidase L-amino peptidase D-ALA esterase/amidase 1vraA00
2YEPA 3N2WA 2VZKA 1VZ7A 3TM2A 3N33A 3N5IA 3NFBA 1VRAA 4IHDA 1VZ8A 3IT6A 4IHEA 1VZ6A 1B65A 3NDVA 3TM1A 2V4IA 2DRHA 3AXGA 3S3UA 3IT4A
chains in the Genus database with same CATH superfamily
2YEPA 3N2WA 2VZKA 1VZ7A 3TM2A 3N33A 3N5IA 3NFBA 1VRAA 4IHDA 1VZ8A 3IT6A 4IHEA 1VZ6A 1B65A 3NDVA 3TM1A 2V4IA 2DRHA 3AXGA 3S3UA 3IT4A
chains in the Genus database with same CATH topology
2YEPA 3N2WA 2VZKA 1VZ7A 3TM2A 3N33A 3N5IA 3NFBA 1VRAA 4IHDA 1VZ8A 3IT6A 4IHEA 1VZ6A 1B65A 3NDVA 3TM1A 2V4IA 2DRHA 3AXGA 3S3UA 3IT4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2YEP A;  3N2W A;  2VZK A;  1VZ7 A;  3TM2 A;  3N33 A;  3N5I A;  3NFB A;  1VRA A;  4IHD A;  1VZ8 A;  3IT6 A;  4IHE A;  1VZ6 A;  1B65 A;  3NDV A;  3TM1 A;  2V4I A;  2DRH A;  3AXG A;  3S3U A;  3IT4 A; 
#chains in the Genus database with same CATH topology
 2YEP A;  3N2W A;  2VZK A;  1VZ7 A;  3TM2 A;  3N33 A;  3N5I A;  3NFB A;  1VRA A;  4IHD A;  1VZ8 A;  3IT6 A;  4IHE A;  1VZ6 A;  1B65 A;  3NDV A;  3TM1 A;  2V4I A;  2DRH A;  3AXG A;  3S3U A;  3IT4 A; 
#chains in the Genus database with same CATH homology
 2YEP A;  3N2W A;  2VZK A;  1VZ7 A;  3TM2 A;  3N33 A;  3N5I A;  3NFB A;  1VRA A;  4IHD A;  1VZ8 A;  3IT6 A;  4IHE A;  1VZ6 A;  1B65 A;  3NDV A;  3TM1 A;  2V4I A;  2DRH A;  3AXG A;  3S3U A;  3IT4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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