1VZYA

Crystal structure of the bacillus subtilis hsp33
Total Genus 87
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
87
sequence length
290
structure length
290
Chain Sequence
MDYLVKALAYDGKVRAYAARTTDMVNEGQRRHGTWPTASAALGRTMTASLMLGAMLKGDDKLTVKIEGGGPIGAIVADANAKGEVRAYVSNPQVHFDLNAAGKLDVRRAVGTNGTLSVVKDLGLREFFTGQVEIVSGELGDDFTYYLVSSEQVPSSVGVGVLVNPDNTILAAGGFIIQLMPGTDDETITKIEQRLSQVEPISKLIQKGLTPEEILEEVLGEKPEILETMPVRFHCPCSKERFETAILGLGKKEIQDMIEEDGQAEAVCHFCNEKYLFTKEELEGLRDQTT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Chaperone
molecule keywords 33 KDA CHAPERONIN
publication title The crystal structure of the reduced, Zn2+-bound form of the B. subtilis Hsp33 chaperone and its implications for the activation mechanism.
pubmed doi rcsb
source organism Bacillus subtilis 168
total genus 87
structure length 290
sequence length 290
chains with identical sequence B
ec nomenclature
pdb deposition date 2004-05-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01430 HSP33 Hsp33 protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.55.30.10 Alpha Beta 3-Layer(bab) Sandwich Hsp33 domain Hsp33 domain 1vzyA01
3.90.1280.10 Alpha Beta Alpha-Beta Complex CBS domain Like HSP33 redox switch-like 1vzyA02
1XJHA 1VZYA 3M7MX 1VQ0A 1HW7A 1I7FA
chains in the Genus database with same CATH superfamily
1XJHA 1VR9A 3GHDA 3OI8A 2J9LA 1VZYA 3M7MX 1VQ0A 1HW7A 3JTFA 3LFRA 3NQRA 1I7FA 2JA3A
chains in the Genus database with same CATH topology
1XJHA 1VZYA 3M7MX 1VQ0A 1HW7A 1I7FA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1XJH A;  1VZY A;  3M7M X;  1VQ0 A;  1HW7 A;  1I7F A; 
#chains in the Genus database with same CATH topology
 1XJH A;  1VR9 A;  3GHD A;  3OI8 A;  2J9L A;  1VZY A;  3M7M X;  1VQ0 A;  1HW7 A;  3JTF A;  3LFR A;  3NQR A;  1I7F A;  2JA3 A; 
#chains in the Genus database with same CATH homology
 1XJH A;  1VZY A;  3M7M X;  1VQ0 A;  1HW7 A;  1I7F A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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