1WGCA

2.2 angstroms resolution structure analysis of two refined n-acetylneuraminyllactose-wheat germ agglutinin isolectin complexes
Total Genus 45
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
45
sequence length
171
structure length
171
Chain Sequence
ERCGEQGSNMECPNNLCCSQYGYCGMGGDYCGKGCQNGACWTSKRCGSQAGGATCTNNQCCSQYGYCGFGAEYCGAGCQGGPCRADIKCGSQAGGKLCPNNLCCSQWGFCGLGSEFCGGGCQSGACSTDKPCGKDAGGRVCTNNYCCSKWGSCGIGPGYCGAGCQSGGCDG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords WHEAT GERM LECTIN
publication title 2.2 A resolution structure analysis of two refined N-acetylneuraminyl-lactose--wheat germ agglutinin isolectin complexes.
pubmed doi rcsb
source organism Triticum aestivum
molecule tags Lectin (agglutinin)
total genus 45
structure length 171
sequence length 171
chains with identical sequence B
ec nomenclature
pdb deposition date 1990-04-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00187 Chitin_bind_1 Chitin recognition protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 1wgcA04
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 1wgcA02
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 1wgcA03
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 1wgcA01
1K7TA 1HEVA 1ULKA 1ULMA 1Q9BA 2CWGA 1ULNA 4AMLA 2X3TA 4WP4A 4MPIA 2DKVA 1WKXA 1WGTA 1P9ZA 2LB7A 1WGCA 1UHAA 1P9GA 7WGAA 9WGAA 2X52A 2WGCA 1K7VA 1K7UA 2UVOA
chains in the Genus database with same CATH superfamily
1KBFA 1VDDA 2V1CA 2K9HA 1SGNI 2CWGA 5FUWA 1UUCA 2B8TA 4AMLA 1CT0I 1PCEA 3PDNA 1LR9A 2ODDA 2YUUA 2CWFA 3QWPA 1V1HA 3OVOA 4MPIA 4WP4A 3OXGA 2ERWA 1HPTA 1TURA 2N17A 2CJSC 1CGJI 2GKVA 2NU1I 1Y1BA 2KMQA 1WGTA 1P9ZA 1SGYI 2QQ0A 3UOEA 1OVOA 3TO6A 3TOAA 2RIJA 5FUVA 1TBQR 2JXDA 2L8EA 2ENZA 1YTPA 1P9GA 2OVOA 2GIVA 2V53A 3FSXA 3QTLD 3R5BA 4UXHA 7WGAA 1UVGA 1OYVI 2NU0I 2XRCA 2JYYA 3UGIA 1DS3I 1TBRR 2WGCA 3UGLA 1TGSI 1PJUA 5CCLA 1MJBA 1FAQA 1W3SA 1ULMA 1Q9BA 3GOXA 3D00A 1M8CA 3E2IA 4HGUA 3CXLA 3TOBA 3UFFA 2ORVA 1FYBA 4A24A 1MT1A 2DKVA 4UXJA 3OL0A 3UEYA 3OXLA 2QQCA 1XX6A 4B6DA 3VDPA 1IW4A 2LEOA 3R5CA 1BMOA 1SGEI 1U5KA 1MJ9A 5E3RA 3SGBI 2NU3I 1PTRA 1Y1CA 2GVIA 2E5RA 2SGQI 2B0UC 2E73A 1WGCA 4SGBI 2NU2I 1FARA 3RU0A 2J9RA 2N71A 2QQDA 3QAHA 2ARPF 2V1CC 2BUSA 1WTJA 1Z2IA 2PQ8A 2WCYA 3OXFA 4UXIA 2SGPI 5HQ8A 2JW6A 2JZMA 1TBNA 1K7UA 1R0RI 1WKXA 1TUSA 2N1AB 2QQEA 2YQPA 3BJIA 1X4SA 1V1IA 3E59A 5J8FA 2SGFI 1ULNA 3KY9A 2X3TA 4DNCA 3R5AA 2P6AC 1FY7A 1NXUA 2CWHA 1HJAI 1XBTA 5FUXA 1RFHA 5FUYA 1OMTA 1AN1I 1BUSA 2UZ3A 2M5XA 5CCMA 1CT2I 2LB7A 2SGDI 1TOTA 2NU4I 2OU2A 1Z7KB 2W0TA 3R5DA 3SEKC 1NUBA 1KBEA 2ELIA 1DS2I 2KMPA 2JA1A 1X74A 1HDLA 1PTQA 2X52A 1IY5A 1TIHA 5JHWC 1S20A 3TO9A 1CSOI 3TO7A 1SGPI 1KMAA 1K7TA 1HEVA 3VDUA 1ULKA 2WVJA 2N52A 3MEKA 4JCVE 1TBOA 4L9MA 1W4RA 4E1PA 3UEJA 1R79A 3HH2C 2KMOA 3SGQI 2OZUA 3B4VC 2GKRI 2SGEI 1SGDI 2J87A 3FSYA 4OVOA 5E3QA 1UVFA 1CT4I 1M8BA 1CHOI 1XA6A 5EX3A 2KMRA 3FC3A 2ENNA 5E3PA 2OD1A 1CE3A 3UGDA 2VRWB 2F3CI 5J8CA 1IY6A 2ROWA 2L7XA 1LR8A 1SGQI 2GKTI 2RC4A 5EX0A 1LR7A 4FKDA 1SGRI 2A20A 3TJQA 2Y0MA 4E1RA 2FNFX 1MJAA 1UHAA 1CGII 2QPOA 1PPFI 1OMUA 2DB6A 2KCXA 2LUYA 1H0ZA 4GI3C 1Y8FA 9WGAA 1N13A 1YU6C 5HI7A 3VE5A 2DIPA 1K7VA 2ORWA 2UVOA 5DAEA
chains in the Genus database with same CATH topology
1K7TA 1HEVA 1ULKA 1ULMA 1Q9BA 2CWGA 1ULNA 4AMLA 2X3TA 4WP4A 4MPIA 2DKVA 1WKXA 1WGTA 1P9ZA 2LB7A 1WGCA 1UHAA 1P9GA 7WGAA 9WGAA 2X52A 2WGCA 1K7VA 1K7UA 2UVOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1K7T A;  1HEV A;  1ULK A;  1ULM A;  1Q9B A;  2CWG A;  1ULN A;  4AML A;  2X3T A;  4WP4 A;  4MPI A;  2DKV A;  1WKX A;  1WGT A;  1P9Z A;  2LB7 A;  1WGC A;  1UHA A;  1P9G A;  7WGA A;  9WGA A;  2X52 A;  2WGC A;  1K7V A;  1K7U A;  2UVO A; 
#chains in the Genus database with same CATH topology
 1KBF A;  1VDD A;  2V1C A;  2K9H A;  1SGN I;  2CWG A;  5FUW A;  1UUC A;  2B8T A;  4AML A;  1CT0 I;  1PCE A;  3PDN A;  1LR9 A;  2ODD A;  2YUU A;  2CWF A;  3QWP A;  1V1H A;  3OVO A;  4MPI A;  4WP4 A;  3OXG A;  2ERW A;  1HPT A;  1TUR A;  2N17 A;  2CJS C;  1CGJ I;  2GKV A;  2NU1 I;  1Y1B A;  2KMQ A;  1WGT A;  1P9Z A;  1SGY I;  2QQ0 A;  3UOE A;  1OVO A;  3TO6 A;  3TOA A;  2RIJ A;  5FUV A;  1TBQ R;  2JXD A;  2L8E A;  2ENZ A;  1YTP A;  1P9G A;  2OVO A;  2GIV A;  2V53 A;  3FSX A;  3QTL D;  3R5B A;  4UXH A;  7WGA A;  1UVG A;  1OYV I;  2NU0 I;  2XRC A;  2JYY A;  3UGI A;  1DS3 I;  1TBR R;  2WGC A;  3UGL A;  1TGS I;  1PJU A;  5CCL A;  1MJB A;  1FAQ A;  1W3S A;  1ULM A;  1Q9B A;  3GOX A;  3D00 A;  1M8C A;  3E2I A;  4HGU A;  3CXL A;  3TOB A;  3UFF A;  2ORV A;  1FYB A;  4A24 A;  1MT1 A;  2DKV A;  4UXJ A;  3OL0 A;  3UEY A;  3OXL A;  2QQC A;  1XX6 A;  4B6D A;  3VDP A;  1IW4 A;  2LEO A;  3R5C A;  1BMO A;  1SGE I;  1U5K A;  1MJ9 A;  5E3R A;  3SGB I;  2NU3 I;  1PTR A;  1Y1C A;  2GVI A;  2E5R A;  2SGQ I;  2B0U C;  2E73 A;  1WGC A;  4SGB I;  2NU2 I;  1FAR A;  3RU0 A;  2J9R A;  2N71 A;  2QQD A;  3QAH A;  2ARP F;  2V1C C;  2BUS A;  1WTJ A;  1Z2I A;  2PQ8 A;  2WCY A;  3OXF A;  4UXI A;  2SGP I;  5HQ8 A;  2JW6 A;  2JZM A;  1TBN A;  1K7U A;  1R0R I;  1WKX A;  1TUS A;  2N1A B;  2QQE A;  2YQP A;  3BJI A;  1X4S A;  1V1I A;  3E59 A;  5J8F A;  2SGF I;  1ULN A;  3KY9 A;  2X3T A;  4DNC A;  3R5A A;  2P6A C;  1FY7 A;  1NXU A;  2CWH A;  1HJA I;  1XBT A;  5FUX A;  1RFH A;  5FUY A;  1OMT A;  1AN1 I;  1BUS A;  2UZ3 A;  2M5X A;  5CCM A;  1CT2 I;  2LB7 A;  2SGD I;  1TOT A;  2NU4 I;  2OU2 A;  1Z7K B;  2W0T A;  3R5D A;  3SEK C;  1NUB A;  1KBE A;  2ELI A;  1DS2 I;  2KMP A;  2JA1 A;  1X74 A;  1HDL A;  1PTQ A;  2X52 A;  1IY5 A;  1TIH A;  5JHW C;  1S20 A;  3TO9 A;  1CSO I;  3TO7 A;  1SGP I;  1KMA A;  1K7T A;  1HEV A;  3VDU A;  1ULK A;  2WVJ A;  2N52 A;  3MEK A;  4JCV E;  1TBO A;  4L9M A;  1W4R A;  4E1P A;  3UEJ A;  1R79 A;  3HH2 C;  2KMO A;  3SGQ I;  2OZU A;  3B4V C;  2GKR I;  2SGE I;  1SGD I;  2J87 A;  3FSY A;  4OVO A;  5E3Q A;  1UVF A;  1CT4 I;  1M8B A;  1CHO I;  1XA6 A;  5EX3 A;  2KMR A;  3FC3 A;  2ENN A;  5E3P A;  2OD1 A;  1CE3 A;  3UGD A;  2VRW B;  2F3C I;  5J8C A;  1IY6 A;  2ROW A;  2L7X A;  1LR8 A;  1SGQ I;  2GKT I;  2RC4 A;  5EX0 A;  1LR7 A;  4FKD A;  1SGR I;  2A20 A;  3TJQ A;  2Y0M A;  4E1R A;  2FNF X;  1MJA A;  1UHA A;  1CGI I;  2QPO A;  1PPF I;  1OMU A;  2DB6 A;  2KCX A;  2LUY A;  1H0Z A;  4GI3 C;  1Y8F A;  9WGA A;  1N13 A;  1YU6 C;  5HI7 A;  3VE5 A;  2DIP A;  1K7V A;  2ORW A;  2UVO A;  5DAE A; 
#chains in the Genus database with same CATH homology
 1K7T A;  1HEV A;  1ULK A;  1ULM A;  1Q9B A;  2CWG A;  1ULN A;  4AML A;  2X3T A;  4WP4 A;  4MPI A;  2DKV A;  1WKX A;  1WGT A;  1P9Z A;  2LB7 A;  1WGC A;  1UHA A;  1P9G A;  7WGA A;  9WGA A;  2X52 A;  2WGC A;  1K7V A;  1K7U A;  2UVO A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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