1WNJA

Nmr structure of human coactosin-like protein
Total Genus 35
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
35
sequence length
145
structure length
145
Chain Sequence
GIRMATKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAFVRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEEDFIKSELKKAGGANYDAQTE
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Protein binding
molecule keywords Coactosin-like protein
publication title NMR structure of human coactosin-like protein
pubmed doi rcsb
source organism Homo sapiens
total genus 35
structure length 145
sequence length 145
ec nomenclature
pdb deposition date 2004-08-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00241 Cofilin_ADF Cofilin/tropomyosin-type actin-binding protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.20.10 Alpha Beta 3-Layer(aba) Sandwich Severin Severin 1wnjA00
2XFAA 2LXXA 3L50A 1DEJS 1TVJA 3CJBG 1QPVA 1RGIG 4CBXG 3TU5B 4JD2H 4LIZA 3CIPG 5HVKD 1KCQA 1V6FA 1SVRA 2FH4A 5KYNA 1C0FS 1M2OA 1YAGG 1EQYS 1HQZ1 1UDMA 1MDUA 4KEEA 1X67A 1C0GS 2XF1A 3EH1A 1T44G 2KVKA 3EFOA 2MP4A 1NPHA 3CI5G 3DAWB 5FAEA 3FFNA 3EH2A 1TMWA 2MOTA 1J72A 1SVQA 5KYYA 2I2QA 2QTVA 2VILA 1JHWA 5IVUA 2MV2A 5A1MA 1T2LA 2FF6G 1H1VG 1AK6A 1VFQA 2LJ8A 3A5NS 2VIKA 4BEX1 2VACA 3EGDB 3Q2BA 1M2VB 5DD2A 2L72A 5KYUB 5HVKB 1F7SA 3EGDA 3FG6A 1M2VA 1Q8XA 2NUTB 1ESVS 1CFYA 5KYUA 3FG7A 1NMDG 2NUTA 3A5OS 4S10C 5KYYB 1D4XG 1YVNG 1WFSA 2FH1A 2W0IA 1VKKA 1D0NA 5KYXB 1WM4A 4Z94G 1CNUA 1PCXA 4PKGG 4CBUG 4PKHB 1T3XA 2FH2A 2NUPB 5KYWB 2LLFA 1NLVG 2NUPA 5KYWA 5L6WC 1PD1A 3EG9B 1PD0A 1AK7A 1T3YA 3EG9A 1COFA 1SVYA 1WNJA 4KEFA 2FGHA 3CJCG 5KYXA 3FFKA 1AHQA 1NM1G 1P8ZG 2FH3A 2D8BA 3A5MS 4CBWG 2HD7A 1Q8GA 1M4JA 3EFOB 1P8XA 3A5LS 3EGXB 5FAFA 4KEDA 2FF3A 4PKIG 3EGXA
chains in the Genus database with same CATH superfamily
2XFAA 2LXXA 3L50A 1DEJS 1TVJA 3CJBG 1QPVA 1RGIG 4CBXG 3TU5B 4JD2H 4LIZA 3CIPG 5HVKD 1KCQA 1V6FA 1SVRA 2FH4A 5KYNA 1C0FS 1M2OA 1YAGG 1EQYS 1HQZ1 1UDMA 1MDUA 4KEEA 1X67A 1C0GS 2XF1A 3EH1A 1T44G 2KVKA 3EFOA 2MP4A 1NPHA 3CI5G 3DAWB 5FAEA 3FFNA 3EH2A 1TMWA 2MOTA 3DA7A 1J72A 1SVQA 5KYYA 2I2QA 2QTVA 2VILA 1JHWA 5IVUA 2MV2A 5A1MA 1T2LA 2FF6G 1H1VG 1AK6A 1VFQA 2LJ8A 3A5NS 2VIKA 4BEX1 2VACA 3EGDB 3Q2BA 1M2VB 5DD2A 2L72A 5KYUB 5HVKB 1F7SA 3EGDA 3FG6A 1M2VA 1Q8XA 2NUTB 1ESVS 1CFYA 5KYUA 3FG7A 1NMDG 2NUTA 3A5OS 4S10C 5KYYB 1D4XG 1YVNG 1WFSA 2FH1A 2W0IA 1VKKA 1D0NA 5KYXB 1WM4A 4Z94G 1CNUA 1PCXA 4PKGG 4CBUG 4PKHB 1T3XA 2FH2A 2NUPB 5KYWB 2LLFA 1NLVG 2NUPA 5KYWA 5L6WC 1PD1A 3EG9B 1PD0A 1AK7A 1T3YA 3EG9A 1COFA 1SVYA 1WNJA 4KEFA 2FGHA 3CJCG 5KYXA 3FFKA 1AHQA 1NM1G 1P8ZG 2FH3A 2D8BA 3A5MS 4CBWG 2HD7A 1Q8GA 1M4JA 3EFOB 1P8XA 3A5LS 3EGXB 5FAFA 4KEDA 2FF3A 4PKIG 3EGXA
chains in the Genus database with same CATH topology
2XFAA 2LXXA 3L50A 1DEJS 1TVJA 3CJBG 1QPVA 1RGIG 4CBXG 3TU5B 4JD2H 4LIZA 3CIPG 5HVKD 1KCQA 1V6FA 1SVRA 2FH4A 5KYNA 1C0FS 1M2OA 1YAGG 1EQYS 1HQZ1 1UDMA 1MDUA 4KEEA 1X67A 1C0GS 2XF1A 3EH1A 1T44G 2KVKA 3EFOA 2MP4A 1NPHA 3CI5G 3DAWB 5FAEA 3FFNA 3EH2A 1TMWA 2MOTA 3DA7A 1J72A 1SVQA 5KYYA 2I2QA 2QTVA 2VILA 1JHWA 5IVUA 2MV2A 5A1MA 1T2LA 2FF6G 1H1VG 1AK6A 1VFQA 2LJ8A 3A5NS 2VIKA 4BEX1 2VACA 3EGDB 3Q2BA 1M2VB 5DD2A 2L72A 5KYUB 5HVKB 1F7SA 3EGDA 3FG6A 1M2VA 1Q8XA 2NUTB 1ESVS 1CFYA 5KYUA 3FG7A 1NMDG 2NUTA 3A5OS 4S10C 5KYYB 1D4XG 1YVNG 1WFSA 2FH1A 2W0IA 1VKKA 1D0NA 5KYXB 1WM4A 4Z94G 1CNUA 1PCXA 4PKGG 4CBUG 4PKHB 1T3XA 2FH2A 2NUPB 5KYWB 2LLFA 1NLVG 2NUPA 5KYWA 5L6WC 1PD1A 3EG9B 1PD0A 1AK7A 1T3YA 3EG9A 1COFA 1SVYA 1WNJA 4KEFA 2FGHA 3CJCG 5KYXA 3FFKA 1AHQA 1NM1G 1P8ZG 2FH3A 2D8BA 3A5MS 4CBWG 2HD7A 1Q8GA 1M4JA 3EFOB 1P8XA 3A5LS 3EGXB 5FAFA 4KEDA 2FF3A 4PKIG 3EGXA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2XFA A;  2LXX A;  3L50 A;  1DEJ S;  1TVJ A;  3CJB G;  1QPV A;  1RGI G;  4CBX G;  3TU5 B;  4JD2 H;  4LIZ A;  3CIP G;  5HVK D;  1KCQ A;  1V6F A;  1SVR A;  2FH4 A;  5KYN A;  1C0F S;  1M2O A;  1YAG G;  1EQY S;  1HQZ 1;  1UDM A;  1MDU A;  4KEE A;  1X67 A;  1C0G S;  2XF1 A;  3EH1 A;  1T44 G;  2KVK A;  3EFO A;  2MP4 A;  1NPH A;  3CI5 G;  3DAW B;  5FAE A;  3FFN A;  3EH2 A;  1TMW A;  2MOT A;  1J72 A;  1SVQ A;  5KYY A;  2I2Q A;  2QTV A;  2VIL A;  1JHW A;  5IVU A;  2MV2 A;  5A1M A;  1T2L A;  2FF6 G;  1H1V G;  1AK6 A;  1VFQ A;  2LJ8 A;  3A5N S;  2VIK A;  4BEX 1;  2VAC A;  3EGD B;  3Q2B A;  1M2V B;  5DD2 A;  2L72 A;  5KYU B;  5HVK B;  1F7S A;  3EGD A;  3FG6 A;  1M2V A;  1Q8X A;  2NUT B;  1ESV S;  1CFY A;  5KYU A;  3FG7 A;  1NMD G;  2NUT A;  3A5O S;  4S10 C;  5KYY B;  1D4X G;  1YVN G;  1WFS A;  2FH1 A;  2W0I A;  1VKK A;  1D0N A;  5KYX B;  1WM4 A;  4Z94 G;  1CNU A;  1PCX A;  4PKG G;  4CBU G;  4PKH B;  1T3X A;  2FH2 A;  2NUP B;  5KYW B;  2LLF A;  1NLV G;  2NUP A;  5KYW A;  5L6W C;  1PD1 A;  3EG9 B;  1PD0 A;  1AK7 A;  1T3Y A;  3EG9 A;  1COF A;  1SVY A;  1WNJ A;  4KEF A;  2FGH A;  3CJC G;  5KYX A;  3FFK A;  1AHQ A;  1NM1 G;  1P8Z G;  2FH3 A;  2D8B A;  3A5M S;  4CBW G;  2HD7 A;  1Q8G A;  1M4J A;  3EFO B;  1P8X A;  3A5L S;  3EGX B;  5FAF A;  4KED A;  2FF3 A;  4PKI G;  3EGX A; 
#chains in the Genus database with same CATH topology
 2XFA A;  2LXX A;  3L50 A;  1DEJ S;  1TVJ A;  3CJB G;  1QPV A;  1RGI G;  4CBX G;  3TU5 B;  4JD2 H;  4LIZ A;  3CIP G;  5HVK D;  1KCQ A;  1V6F A;  1SVR A;  2FH4 A;  5KYN A;  1C0F S;  1M2O A;  1YAG G;  1EQY S;  1HQZ 1;  1UDM A;  1MDU A;  4KEE A;  1X67 A;  1C0G S;  2XF1 A;  3EH1 A;  1T44 G;  2KVK A;  3EFO A;  2MP4 A;  1NPH A;  3CI5 G;  3DAW B;  5FAE A;  3FFN A;  3EH2 A;  1TMW A;  2MOT A;  3DA7 A;  1J72 A;  1SVQ A;  5KYY A;  2I2Q A;  2QTV A;  2VIL A;  1JHW A;  5IVU A;  2MV2 A;  5A1M A;  1T2L A;  2FF6 G;  1H1V G;  1AK6 A;  1VFQ A;  2LJ8 A;  3A5N S;  2VIK A;  4BEX 1;  2VAC A;  3EGD B;  3Q2B A;  1M2V B;  5DD2 A;  2L72 A;  5KYU B;  5HVK B;  1F7S A;  3EGD A;  3FG6 A;  1M2V A;  1Q8X A;  2NUT B;  1ESV S;  1CFY A;  5KYU A;  3FG7 A;  1NMD G;  2NUT A;  3A5O S;  4S10 C;  5KYY B;  1D4X G;  1YVN G;  1WFS A;  2FH1 A;  2W0I A;  1VKK A;  1D0N A;  5KYX B;  1WM4 A;  4Z94 G;  1CNU A;  1PCX A;  4PKG G;  4CBU G;  4PKH B;  1T3X A;  2FH2 A;  2NUP B;  5KYW B;  2LLF A;  1NLV G;  2NUP A;  5KYW A;  5L6W C;  1PD1 A;  3EG9 B;  1PD0 A;  1AK7 A;  1T3Y A;  3EG9 A;  1COF A;  1SVY A;  1WNJ A;  4KEF A;  2FGH A;  3CJC G;  5KYX A;  3FFK A;  1AHQ A;  1NM1 G;  1P8Z G;  2FH3 A;  2D8B A;  3A5M S;  4CBW G;  2HD7 A;  1Q8G A;  1M4J A;  3EFO B;  1P8X A;  3A5L S;  3EGX B;  5FAF A;  4KED A;  2FF3 A;  4PKI G;  3EGX A; 
#chains in the Genus database with same CATH homology
 2XFA A;  2LXX A;  3L50 A;  1DEJ S;  1TVJ A;  3CJB G;  1QPV A;  1RGI G;  4CBX G;  3TU5 B;  4JD2 H;  4LIZ A;  3CIP G;  5HVK D;  1KCQ A;  1V6F A;  1SVR A;  2FH4 A;  5KYN A;  1C0F S;  1M2O A;  1YAG G;  1EQY S;  1HQZ 1;  1UDM A;  1MDU A;  4KEE A;  1X67 A;  1C0G S;  2XF1 A;  3EH1 A;  1T44 G;  2KVK A;  3EFO A;  2MP4 A;  1NPH A;  3CI5 G;  3DAW B;  5FAE A;  3FFN A;  3EH2 A;  1TMW A;  2MOT A;  3DA7 A;  1J72 A;  1SVQ A;  5KYY A;  2I2Q A;  2QTV A;  2VIL A;  1JHW A;  5IVU A;  2MV2 A;  5A1M A;  1T2L A;  2FF6 G;  1H1V G;  1AK6 A;  1VFQ A;  2LJ8 A;  3A5N S;  2VIK A;  4BEX 1;  2VAC A;  3EGD B;  3Q2B A;  1M2V B;  5DD2 A;  2L72 A;  5KYU B;  5HVK B;  1F7S A;  3EGD A;  3FG6 A;  1M2V A;  1Q8X A;  2NUT B;  1ESV S;  1CFY A;  5KYU A;  3FG7 A;  1NMD G;  2NUT A;  3A5O S;  4S10 C;  5KYY B;  1D4X G;  1YVN G;  1WFS A;  2FH1 A;  2W0I A;  1VKK A;  1D0N A;  5KYX B;  1WM4 A;  4Z94 G;  1CNU A;  1PCX A;  4PKG G;  4CBU G;  4PKH B;  1T3X A;  2FH2 A;  2NUP B;  5KYW B;  2LLF A;  1NLV G;  2NUP A;  5KYW A;  5L6W C;  1PD1 A;  3EG9 B;  1PD0 A;  1AK7 A;  1T3Y A;  3EG9 A;  1COF A;  1SVY A;  1WNJ A;  4KEF A;  2FGH A;  3CJC G;  5KYX A;  3FFK A;  1AHQ A;  1NM1 G;  1P8Z G;  2FH3 A;  2D8B A;  3A5M S;  4CBW G;  2HD7 A;  1Q8G A;  1M4J A;  3EFO B;  1P8X A;  3A5L S;  3EGX B;  5FAF A;  4KED A;  2FF3 A;  4PKI G;  3EGX A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...