1WV3A

Crystal structure of n-terminal domain of hypothetical protein sav0287 from staphylococcus aureus
Total Genus 43
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
43
sequence length
186
structure length
186
Chain Sequence
MHKLIIKYNKQLKMLNLRDGKTYTISEDERADITLKSLGEVIHLEQNNQGTWQANHTSINKVLVRKGDLDDITLQLYTEADYASFAYPSIQDTMTIGPNAYDDMVIQSLMNAIIIKDFQSIQESQYVRIVHDKNTDVYINYELQEQLTNKAYIGDHIYVEGIWLEVQADGLNVLSQNTVASSLIRL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Structural genomics, unknown function
molecule keywords similar to DNA segregation ATPase and related proteins
publication title Crystal structure analysis reveals a novel forkhead-associated domain of ESAT-6 secretion system C protein in Staphylococcus aureus.
pubmed doi rcsb
source organism Staphylococcus aureus subsp. aureus mu50
total genus 43
structure length 186
sequence length 186
ec nomenclature
pdb deposition date 2004-12-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF12538 FtsK_SpoIIIE_N DNA transporter
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.200.20 Mainly Beta Sandwich Tumour Suppressor Smad4 Tumour Suppressor Smad4 1wv3A02
2.60.200.20 Mainly Beta Sandwich Tumour Suppressor Smad4 Tumour Suppressor Smad4 1wv3A01
2AFFA 3VPYA 1DMZA 3UNMA 3I0NA 1R21A 2KB3A 3HUEA 3FM8A 3POAA 2BRFA 2JPEA 1J4PA 1FHRA 1K3NA 3I6UA 1QU5A 3OUNA 1UJXA 1YJMA 1LGQA 1WLNA 2XT9B 3UNNA 3UN0A 3I6WA 1UHTA 1K3JA 4EJQA 3KT9A 2JQJA 1K3QA 3PO8A 2EH0A 3VA1A 2A0TA 1MZKA 2PIEA 4D9VA 5DJOA 2FEZA 1J4KA 3UMZA 3ELSA 5A8IA 3VA4A 2CSWA 1K2MA 3UOTA 1YJ5C 5E50A 4EGXA 2JQIA 1FHQA 1J4LA 2KKLA 2FF4A 4JONA 2G1LA 3HUFA 1J4QA 3GQSA 2KFUA 2LC1A 1J4OA 1G3GA 2KB4A 3MDBA 3ELVA 4A0EA 3I0MA 1WV3A 3UV0A 4QCJA 4G2SA 4H87A 2JKDA 1G6GA 3HX1A 1K2NA 2W3OA 1GXCA 2JQLA 1LGPA
chains in the Genus database with same CATH superfamily
2AFFA 3VPYA 2QV7A 1DMZA 3UNMA 1U7VA 3I0NA 1R21A 3V7YA 2KB3A 5JEJA 3HUEA 2I2CA 3FM8A 5EJGA 3AFOA 3POAA 2BRFA 2JPEA 3T5PA 1J4PA 1FHRA 1K3NA 3S40A 3I6UA 5DHRA 1QU5A 5DHPA 1SUWA 2I1WA 3OUNA 3VZCA 1UJXA 1YJMA 1LGQA 1WLNA 5DHSA 2XT9B 3UNNA 1MJSA 3UN0A 3DITA 4JIWD 4DY6A 3I6WA 4WERA 5EJHA 1UHTA 1K3JA 4EJQA 3A77A 3KT9A 5JEKA 4WRRA 3PFNA 2JQJA 5DHTA 1K3QA 4L02A 3PO8A 2EH0A 2I2DA 5C4VA 2Q5FA 5DHQA 1Y3HA 3VA1A 5EJFA 3V7WA 1DD1A 2A0TA 5DHUA 1G88A 1YGSA 1Z0ZA 1MZKA 2PIEA 4D9VA 1KHUA 1U7FB 3DSHA 5JEMA 4A4YA 4V24A 5DJOA 2FEZA 1J4KA 5EJIA 3ELSA 3UMZA 3VZDA 5A8IA 2I2FA 1YT5A 1Y3IA 3VA4A 3V80A 2CSWA 5BVIA 1K2MA 5JERA 3UOTA 1YJ5C 5E50A 5JELA 1KHXA 4EGXA 2JQIA 2P1RA 1FHQA 3V7UA 1U0RA 4R9PA 1Z0UA 1J4LA 2JGRA 2KKLA 3V8NA 3VZBA 2FF4A 2I29A 4JONA 1Z0SA 4JIVD 5JEOA 2G1LA 3HUFA 1J4QA 4HAOA 1U7VB 1U7FA 3GQSA 1DEVA 3V8PA 3V8QA 2KFUA 2LC1A 1J4OA 1G3GA 2KB4A 3MDBA 3ELVA 4A0EA 3I0MA 2BONA 2XXSA 1MK2A 1MR1A 1U0TA 1WV3A 4KU0D 1J2FA 3UV0A 2I2BA 4QCJA 4G2SA 3V8RA 4H87A 2JKDA 2AN1A 1ZOQA 2I2AA 1G6GA 2QVLA 3V8MA 3HX1A 1K2NA 1QWTA 3GMJA 2W3OA 1GXCA 2JQLA 1LGPA
chains in the Genus database with same CATH topology
2AFFA 3VPYA 2QV7A 1DMZA 3UNMA 1U7VA 3I0NA 1R21A 2KB3A 5JEJA 3HUEA 3FM8A 3POAA 2BRFA 2JPEA 3T5PA 1J4PA 1FHRA 1K3NA 3S40A 3I6UA 1QU5A 3OUNA 3VZCA 1UJXA 1YJMA 1LGQA 1WLNA 2XT9B 3UNNA 1MJSA 3UN0A 3DITA 4JIWD 3I6WA 4WERA 1UHTA 1K3JA 4EJQA 3A77A 3KT9A 5JEKA 4WRRA 2JQJA 1K3QA 4L02A 3PO8A 2EH0A 5C4VA 3VA1A 1DD1A 2A0TA 1G88A 1YGSA 1MZKA 2PIEA 4D9VA 1KHUA 1U7FB 3DSHA 5JEMA 4A4YA 4V24A 5DJOA 2FEZA 1J4KA 3UMZA 3ELSA 3VZDA 5A8IA 3VA4A 2CSWA 5BVIA 1K2MA 5JERA 3UOTA 1YJ5C 5E50A 5JELA 1KHXA 4EGXA 2JQIA 2P1RA 1FHQA 4R9PA 1J4LA 2JGRA 2KKLA 3VZBA 2FF4A 4JONA 4JIVD 5JEOA 2G1LA 3HUFA 1J4QA 1U7VB 1U7FA 3GQSA 1DEVA 2KFUA 2LC1A 1J4OA 1G3GA 2KB4A 3MDBA 3ELVA 4A0EA 3I0MA 2BONA 2XXSA 1MK2A 1MR1A 1WV3A 4KU0D 1J2FA 3UV0A 4QCJA 4G2SA 4H87A 2JKDA 1ZOQA 1G6GA 2QVLA 3HX1A 1K2NA 1QWTA 3GMJA 2W3OA 1GXCA 2JQLA 1LGPA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2AFF A;  3VPY A;  1DMZ A;  3UNM A;  3I0N A;  1R21 A;  2KB3 A;  3HUE A;  3FM8 A;  3POA A;  2BRF A;  2JPE A;  1J4P A;  1FHR A;  1K3N A;  3I6U A;  1QU5 A;  3OUN A;  1UJX A;  1YJM A;  1LGQ A;  1WLN A;  2XT9 B;  3UNN A;  3UN0 A;  3I6W A;  1UHT A;  1K3J A;  4EJQ A;  3KT9 A;  2JQJ A;  1K3Q A;  3PO8 A;  2EH0 A;  3VA1 A;  2A0T A;  1MZK A;  2PIE A;  4D9V A;  5DJO A;  2FEZ A;  1J4K A;  3UMZ A;  3ELS A;  5A8I A;  3VA4 A;  2CSW A;  1K2M A;  3UOT A;  1YJ5 C;  5E50 A;  4EGX A;  2JQI A;  1FHQ A;  1J4L A;  2KKL A;  2FF4 A;  4JON A;  2G1L A;  3HUF A;  1J4Q A;  3GQS A;  2KFU A;  2LC1 A;  1J4O A;  1G3G A;  2KB4 A;  3MDB A;  3ELV A;  4A0E A;  3I0M A;  1WV3 A;  3UV0 A;  4QCJ A;  4G2S A;  4H87 A;  2JKD A;  1G6G A;  3HX1 A;  1K2N A;  2W3O A;  1GXC A;  2JQL A;  1LGP A; 
#chains in the Genus database with same CATH topology
 2AFF A;  3VPY A;  2QV7 A;  1DMZ A;  3UNM A;  1U7V A;  3I0N A;  1R21 A;  3V7Y A;  2KB3 A;  5JEJ A;  3HUE A;  2I2C A;  3FM8 A;  5EJG A;  3AFO A;  3POA A;  2BRF A;  2JPE A;  3T5P A;  1J4P A;  1FHR A;  1K3N A;  3S40 A;  3I6U A;  5DHR A;  1QU5 A;  5DHP A;  1SUW A;  2I1W A;  3OUN A;  3VZC A;  1UJX A;  1YJM A;  1LGQ A;  1WLN A;  5DHS A;  2XT9 B;  3UNN A;  1MJS A;  3UN0 A;  3DIT A;  4JIW D;  4DY6 A;  3I6W A;  4WER A;  5EJH A;  1UHT A;  1K3J A;  4EJQ A;  3A77 A;  3KT9 A;  5JEK A;  4WRR A;  3PFN A;  2JQJ A;  5DHT A;  1K3Q A;  4L02 A;  3PO8 A;  2EH0 A;  2I2D A;  5C4V A;  2Q5F A;  5DHQ A;  1Y3H A;  3VA1 A;  5EJF A;  3V7W A;  1DD1 A;  2A0T A;  5DHU A;  1G88 A;  1YGS A;  1Z0Z A;  1MZK A;  2PIE A;  4D9V A;  1KHU A;  1U7F B;  3DSH A;  5JEM A;  4A4Y A;  4V24 A;  5DJO A;  2FEZ A;  1J4K A;  5EJI A;  3ELS A;  3UMZ A;  3VZD A;  5A8I A;  2I2F A;  1YT5 A;  1Y3I A;  3VA4 A;  3V80 A;  2CSW A;  5BVI A;  1K2M A;  5JER A;  3UOT A;  1YJ5 C;  5E50 A;  5JEL A;  1KHX A;  4EGX A;  2JQI A;  2P1R A;  1FHQ A;  3V7U A;  1U0R A;  4R9P A;  1Z0U A;  1J4L A;  2JGR A;  2KKL A;  3V8N A;  3VZB A;  2FF4 A;  2I29 A;  4JON A;  1Z0S A;  4JIV D;  5JEO A;  2G1L A;  3HUF A;  1J4Q A;  4HAO A;  1U7V B;  1U7F A;  3GQS A;  1DEV A;  3V8P A;  3V8Q A;  2KFU A;  2LC1 A;  1J4O A;  1G3G A;  2KB4 A;  3MDB A;  3ELV A;  4A0E A;  3I0M A;  2BON A;  2XXS A;  1MK2 A;  1MR1 A;  1U0T A;  1WV3 A;  4KU0 D;  1J2F A;  3UV0 A;  2I2B A;  4QCJ A;  4G2S A;  3V8R A;  4H87 A;  2JKD A;  2AN1 A;  1ZOQ A;  2I2A A;  1G6G A;  2QVL A;  3V8M A;  3HX1 A;  1K2N A;  1QWT A;  3GMJ A;  2W3O A;  1GXC A;  2JQL A;  1LGP A; 
#chains in the Genus database with same CATH homology
 2AFF A;  3VPY A;  2QV7 A;  1DMZ A;  3UNM A;  1U7V A;  3I0N A;  1R21 A;  2KB3 A;  5JEJ A;  3HUE A;  3FM8 A;  3POA A;  2BRF A;  2JPE A;  3T5P A;  1J4P A;  1FHR A;  1K3N A;  3S40 A;  3I6U A;  1QU5 A;  3OUN A;  3VZC A;  1UJX A;  1YJM A;  1LGQ A;  1WLN A;  2XT9 B;  3UNN A;  1MJS A;  3UN0 A;  3DIT A;  4JIW D;  3I6W A;  4WER A;  1UHT A;  1K3J A;  4EJQ A;  3A77 A;  3KT9 A;  5JEK A;  4WRR A;  2JQJ A;  1K3Q A;  4L02 A;  3PO8 A;  2EH0 A;  5C4V A;  3VA1 A;  1DD1 A;  2A0T A;  1G88 A;  1YGS A;  1MZK A;  2PIE A;  4D9V A;  1KHU A;  1U7F B;  3DSH A;  5JEM A;  4A4Y A;  4V24 A;  5DJO A;  2FEZ A;  1J4K A;  3UMZ A;  3ELS A;  3VZD A;  5A8I A;  3VA4 A;  2CSW A;  5BVI A;  1K2M A;  5JER A;  3UOT A;  1YJ5 C;  5E50 A;  5JEL A;  1KHX A;  4EGX A;  2JQI A;  2P1R A;  1FHQ A;  4R9P A;  1J4L A;  2JGR A;  2KKL A;  3VZB A;  2FF4 A;  4JON A;  4JIV D;  5JEO A;  2G1L A;  3HUF A;  1J4Q A;  1U7V B;  1U7F A;  3GQS A;  1DEV A;  2KFU A;  2LC1 A;  1J4O A;  1G3G A;  2KB4 A;  3MDB A;  3ELV A;  4A0E A;  3I0M A;  2BON A;  2XXS A;  1MK2 A;  1MR1 A;  1WV3 A;  4KU0 D;  1J2F A;  3UV0 A;  4QCJ A;  4G2S A;  4H87 A;  2JKD A;  1ZOQ A;  1G6G A;  2QVL A;  3HX1 A;  1K2N A;  1QWT A;  3GMJ A;  2W3O A;  1GXC A;  2JQL A;  1LGP A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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