1WX2B

Crystal structure of the oxy-form of the copper-bound streptomyces castaneoglobisporus tyrosinase complexed with a caddie protein prepared by the addition of hydrogenperoxide
Total Genus 15
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
15
sequence length
83
structure length
72
Chain Sequence
AAPESFDEVYKGRRIQGRPAGYEVFVDGVQLHVMRNADGSWISVVSHYDPVPTPRAAARAAVDELQGAPLLP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase/metal transport
molecule keywords tyrosinase
publication title Crystallographic Evidence That the Dinuclear Copper Center of Tyrosinase Is Flexible during Catalysis
pubmed doi rcsb
source organism Streptomyces castaneoglobisporus
total genus 15
structure length 72
sequence length 83
ec nomenclature
pdb deposition date 2005-01-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF06236 MelC1 Tyrosinase co-factor MelC1
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1880.10 Alpha Beta 2-Layer Sandwich protein ne1242 fold protein ne1242 domain like 1wx2B01
3AWXB 2AHLB 3AWYB 2ZMZB 1WX5B 2ZWEB 2ZMXB 1WXCB 3AX0B 2ZWGB 3AWWB 2ZMYB 2ZWFB 3AWUB 3AWVB 3AWTB 3AWZB 2AHKB 1WX2B 1WX4B 3AWSB 2JV8A 2ZWDB
chains in the Genus database with same CATH superfamily
4NBGA 3AWXB 2AHLB 3VMIA 1WW9A 4NB8A 3AWYB 2ZMZB 1WX5B 2ZWEB 2ZMXB 1WXCB 3AX0B 1Z03A 2ZWGB 3AWWB 4NBAA 4NBBA 2ZMYB 3GKQA 2DE7A 1Z02A 2ZWFB 3AWUB 3AWVB 3VMGA 3AWZB 3AWTB 1Z01A 2AHKB 2DE5A 2DE6A 1WX2B 4NB9A 4NBEA 4NBCA 1WX4B 4NBFA 4NBDA 3VMHA 3AWSB 4NBHA 3GCFA 2JV8A 2ZWDB
chains in the Genus database with same CATH topology
3AWXB 2AHLB 3AWYB 2ZMZB 1WX5B 2ZWEB 2ZMXB 1WXCB 3AX0B 2ZWGB 3AWWB 2ZMYB 2ZWFB 3AWUB 3AWVB 3AWTB 3AWZB 2AHKB 1WX2B 1WX4B 3AWSB 2JV8A 2ZWDB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3AWX B;  2AHL B;  3AWY B;  2ZMZ B;  1WX5 B;  2ZWE B;  2ZMX B;  1WXC B;  3AX0 B;  2ZWG B;  3AWW B;  2ZMY B;  2ZWF B;  3AWU B;  3AWV B;  3AWT B;  3AWZ B;  2AHK B;  1WX2 B;  1WX4 B;  3AWS B;  2JV8 A;  2ZWD B; 
#chains in the Genus database with same CATH topology
 4NBG A;  3AWX B;  2AHL B;  3VMI A;  1WW9 A;  4NB8 A;  3AWY B;  2ZMZ B;  1WX5 B;  2ZWE B;  2ZMX B;  1WXC B;  3AX0 B;  1Z03 A;  2ZWG B;  3AWW B;  4NBA A;  4NBB A;  2ZMY B;  3GKQ A;  2DE7 A;  1Z02 A;  2ZWF B;  3AWU B;  3AWV B;  3VMG A;  3AWZ B;  3AWT B;  1Z01 A;  2AHK B;  2DE5 A;  2DE6 A;  1WX2 B;  4NB9 A;  4NBE A;  4NBC A;  1WX4 B;  4NBF A;  4NBD A;  3VMH A;  3AWS B;  4NBH A;  3GCF A;  2JV8 A;  2ZWD B; 
#chains in the Genus database with same CATH homology
 3AWX B;  2AHL B;  3AWY B;  2ZMZ B;  1WX5 B;  2ZWE B;  2ZMX B;  1WXC B;  3AX0 B;  2ZWG B;  3AWW B;  2ZMY B;  2ZWF B;  3AWU B;  3AWV B;  3AWT B;  3AWZ B;  2AHK B;  1WX2 B;  1WX4 B;  3AWS B;  2JV8 A;  2ZWD B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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