1X4SA

Solution structure of zinc finger hit domain in protein fon
Total Genus 6
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
6
sequence length
59
structure length
59
Chain Sequence
b'GSSGSSGMEPAGPCGFCPAGEVQPARYTCPRCNAPYCSLRCYRTHGTCAENFYSGPSSG'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Solution structure of the zinc finger HIT domain in protein FON
pubmed doi rcsb
molecule keywords Zinc finger HIT domain containing protein 2
source organism Homo sapiens
molecule tags Metal binding protein
total genus 6
structure length 59
sequence length 59
ec nomenclature
pdb deposition date 2005-05-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF04438 zf-HIT HIT zinc finger
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.190 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1x4sA00
1X4SA
chains in the Genus database with same CATH superfamily
2CJSC 2JW6A 1R79A 2LB7A 1TBQR 1H0ZA 2UZ3A 2GIVA 4A24A 4B6DA 7WGAA 1VDDA 1AN1I 2NU2I 1UVFA 1TBNA 4L9MA 1FYBA 1UHAA 2N17A 2PQ8A 5J8FA 5DAEA 1PCEA 3TO9A 3QAHA 1P9GA 1YTPA 1CE3A 2LEOA 1KBEA 1WTJA 2ROWA 3HH2C 3CXLA 5FUVA 3UEYA 1K7VA 1XBTA 1PPFI 2F3CI 2KMRA 2GVIA 4UXIA 1OYVI 2UVOA 1CT2I 1K7UA 1X4SA 2LUYA 3OVOA 2P6AC 2QQDA 2VRWB 2J87A 3KY9A 5EX3A 1NXUA 2JXDA 5FUYA 5HI7A 2OVOA 1KMAA 2SGDI 3RU0A 4MPIA 3UGLA 1TBOA 1SGEI 2KMOA 2QQCA 1OMTA 1Q9BA 2NU1I 4WP4A 2M5XA 1CSOI 1CHOI 1TGSI 5J8CA 1HPTA 1TOTA 1MJ9A 1PTQA 2DIPA 2JYYA 1Z7KB 2SGFI 3MEKA 1MJAA 5FUWA 2DB6A 1YU6C 2E73A 1ULNA 2BUSA 2X52A 5JHWC 1UVGA 1IY5A 1KBFA 2SGPI 3UOEA 4OVOA 1IY6A 1LR8A 1SGNI 1TURA 1W3SA 3B4VC 2GKTI 1FAQA 3SGBI 1Y1CA 4GI3C 1WGTA 1CT4I 2SGQI 2CWGA 2Y0MA 3FSXA 2J9RA 3SEKC 1DS2I 2WVJA 1FARA 2NU0I 1OMUA 2L7XA 3OL0A 2B8TA 4HGUA 1SGPI 1SGRI 3R5DA 2A20A 3VDUA 1BMOA 1W4RA 1TUSA 3BJIA 3TO6A 1MJBA 1LR9A 2WGCA 2ELIA 1S20A 2V53A 4UXHA 1Y1BA 2XRCA 2NU4I 1U5KA 2ORVA 2DKVA 3TOBA 2N1AB 2ORWA 3FC3A 1PJUA 2W0TA 3VE5A 1OVOA 3UGIA 1IW4A 3E2IA 3TOAA 1RFHA 3GOXA 5E3QA 2OU2A 3UFFA 2FNFX 2QQEA 2GKRI 5E3PA 1ULKA 2YUUA 2SGEI 1MT1A 4DNCA 1M8CA 2V1CA 2L8EA 3TO7A 2OD1A 4E1RA 5CCLA 5FUXA 2B0UC 1CT0I 1M8BA 2QQ0A 1SGDI 1WKXA 1DS3I 3VDPA 2GKVA 1WGCA 2JZMA 2X3TA 3TJQA 1LR7A 4SGBI 1V1HA 1K7TA 1XX6A 5CCMA 2ENZA 5E3RA 2E5RA 3UGDA 1X74A 1TBRR 1CGJI 4AMLA 9WGAA 2ERWA 2JA1A 2KCXA 3QWPA 4JCVE 1V1IA 1SGYI 2ARPF 3R5BA 3OXLA 2CWFA 1FY7A 3OXGA 1N13A 1NUBA 3R5AA 5HQ8A 3R5CA 2RIJA 1PTRA 2ENNA 3PDNA 4E1PA 2CWHA 1HEVA 3E59A 1Y8FA 3QTLD 1XA6A 3D00A 3SGQI 2QPOA 1CGII 2KMQA 1R0RI 2K9HA 2N52A 1ULMA 1UUCA 2V1CC 1SGQI 2OZUA 2KMPA 4FKDA 2NU3I 1Z2IA 3UEJA 2YQPA 3FSYA 5EX0A 2ODDA 1HDLA 2WCYA 3OXFA 1P9ZA 2N71A 1TIHA 2RC4A 4UXJA 1HJAI 1BUSA
chains in the Genus database with same CATH topology
2CJSC 2JW6A 1R79A 1TBQR 1H0ZA 2UZ3A 4A24A 4B6DA 1VDDA 1AN1I 2NU2I 1UVFA 1TBNA 4L9MA 1FYBA 2N17A 5DAEA 1PCEA 1YTPA 1CE3A 2LEOA 1KBEA 2ROWA 3HH2C 3CXLA 5FUVA 3UEYA 1XBTA 1PPFI 2F3CI 2KMRA 2GVIA 4UXIA 1OYVI 1CT2I 1X4SA 2LUYA 3OVOA 2P6AC 2QQDA 2VRWB 2J87A 3KY9A 5EX3A 5FUYA 2JXDA 5HI7A 2OVOA 1KMAA 2SGDI 3RU0A 3UGLA 1TBOA 1SGEI 2KMOA 2QQCA 1OMTA 2NU1I 2M5XA 1CSOI 1CHOI 1TGSI 3GOXA 1HPTA 1TOTA 1PTQA 2DIPA 2JYYA 3MEKA 1Z7KB 2SGFI 5FUWA 2DB6A 1YU6C 2E73A 2BUSA 5JHWC 1UVGA 1IY5A 1KBFA 2SGPI 4OVOA 1IY6A 1LR8A 1SGNI 1TURA 1W3SA 3B4VC 2GKTI 1FAQA 3SGBI 1Y1CA 4GI3C 1CT4I 2SGQI 2J9RA 3SEKC 1DS2I 2WVJA 1FARA 2NU0I 1OMUA 2L7XA 3OL0A 2B8TA 4HGUA 1SGPI 1SGRI 5CCLA 2A20A 3VDUA 1BMOA 1W4RA 1TUSA 3BJIA 1LR9A 2ELIA 2V53A 4UXHA 1Y1BA 2XRCA 2NU4I 1U5KA 2ORVA 2N1AB 2ORWA 3FC3A 1PJUA 2W0TA 3VE5A 1OVOA 3UGIA 1IW4A 3E2IA 1RFHA 3UFFA 2FNFX 2QQEA 2GKRI 2YUUA 2SGEI 1MT1A 1M8CA 2V1CA 2L8EA 2OD1A 4E1RA 5FUXA 2B0UC 1CT0I 1M8BA 2QQ0A 1SGDI 1DS3I 3VDPA 2GKVA 2JZMA 3TJQA 1LR7A 4SGBI 1XX6A 1V1HA 5CCMA 2ENZA 2E5RA 3UGDA 1X74A 1TBRR 1CGJI 2ERWA 2JA1A 2KCXA 3QWPA 4JCVE 1V1IA 1SGYI 2ARPF 5HQ8A 3OXLA 3OXGA 1N13A 1NUBA 1PTRA 2ENNA 3PDNA 4E1PA 3E59A 1Y8FA 3QTLD 1XA6A 3D00A 3SGQI 2QPOA 1CGII 2KMQA 1R0RI 2K9HA 2N52A 1UUCA 2V1CC 1SGQI 2KMPA 4FKDA 2NU3I 3UEJA 2YQPA 5EX0A 2ODDA 1HDLA 2WCYA 3OXFA 2N71A 1TIHA 4UXJA 1HJAI 1BUSA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1X4S A; 
#chains in the Genus database with same CATH topology
 2CJS C;  2JW6 A;  1R79 A;  2LB7 A;  1TBQ R;  1H0Z A;  2UZ3 A;  2GIV A;  4A24 A;  4B6D A;  7WGA A;  1VDD A;  1AN1 I;  2NU2 I;  1UVF A;  1TBN A;  4L9M A;  1FYB A;  1UHA A;  2N17 A;  2PQ8 A;  5J8F A;  5DAE A;  1PCE A;  3TO9 A;  3QAH A;  1P9G A;  1YTP A;  1CE3 A;  2LEO A;  1KBE A;  1WTJ A;  2ROW A;  3HH2 C;  3CXL A;  5FUV A;  3UEY A;  1K7V A;  1XBT A;  1PPF I;  2F3C I;  2KMR A;  2GVI A;  4UXI A;  1OYV I;  2UVO A;  1CT2 I;  1K7U A;  1X4S A;  2LUY A;  3OVO A;  2P6A C;  2QQD A;  2VRW B;  2J87 A;  3KY9 A;  5EX3 A;  1NXU A;  2JXD A;  5FUY A;  5HI7 A;  2OVO A;  1KMA A;  2SGD I;  3RU0 A;  4MPI A;  3UGL A;  1TBO A;  1SGE I;  2KMO A;  2QQC A;  1OMT A;  1Q9B A;  2NU1 I;  4WP4 A;  2M5X A;  1CSO I;  1CHO I;  1TGS I;  5J8C A;  1HPT A;  1TOT A;  1MJ9 A;  1PTQ A;  2DIP A;  2JYY A;  1Z7K B;  2SGF I;  3MEK A;  1MJA A;  5FUW A;  2DB6 A;  1YU6 C;  2E73 A;  1ULN A;  2BUS A;  2X52 A;  5JHW C;  1UVG A;  1IY5 A;  1KBF A;  2SGP I;  3UOE A;  4OVO A;  1IY6 A;  1LR8 A;  1SGN I;  1TUR A;  1W3S A;  3B4V C;  2GKT I;  1FAQ A;  3SGB I;  1Y1C A;  4GI3 C;  1WGT A;  1CT4 I;  2SGQ I;  2CWG A;  2Y0M A;  3FSX A;  2J9R A;  3SEK C;  1DS2 I;  2WVJ A;  1FAR A;  2NU0 I;  1OMU A;  2L7X A;  3OL0 A;  2B8T A;  4HGU A;  1SGP I;  1SGR I;  3R5D A;  2A20 A;  3VDU A;  1BMO A;  1W4R A;  1TUS A;  3BJI A;  3TO6 A;  1MJB A;  1LR9 A;  2WGC A;  2ELI A;  1S20 A;  2V53 A;  4UXH A;  1Y1B A;  2XRC A;  2NU4 I;  1U5K A;  2ORV A;  2DKV A;  3TOB A;  2N1A B;  2ORW A;  3FC3 A;  1PJU A;  2W0T A;  3VE5 A;  1OVO A;  3UGI A;  1IW4 A;  3E2I A;  3TOA A;  1RFH A;  3GOX A;  5E3Q A;  2OU2 A;  3UFF A;  2FNF X;  2QQE A;  2GKR I;  5E3P A;  1ULK A;  2YUU A;  2SGE I;  1MT1 A;  4DNC A;  1M8C A;  2V1C A;  2L8E A;  3TO7 A;  2OD1 A;  4E1R A;  5CCL A;  5FUX A;  2B0U C;  1CT0 I;  1M8B A;  2QQ0 A;  1SGD I;  1WKX A;  1DS3 I;  3VDP A;  2GKV A;  1WGC A;  2JZM A;  2X3T A;  3TJQ A;  1LR7 A;  4SGB I;  1V1H A;  1K7T A;  1XX6 A;  5CCM A;  2ENZ A;  5E3R A;  2E5R A;  3UGD A;  1X74 A;  1TBR R;  1CGJ I;  4AML A;  9WGA A;  2ERW A;  2JA1 A;  2KCX A;  3QWP A;  4JCV E;  1V1I A;  1SGY I;  2ARP F;  3R5B A;  3OXL A;  2CWF A;  1FY7 A;  3OXG A;  1N13 A;  1NUB A;  3R5A A;  5HQ8 A;  3R5C A;  2RIJ A;  1PTR A;  2ENN A;  3PDN A;  4E1P A;  2CWH A;  1HEV A;  3E59 A;  1Y8F A;  3QTL D;  1XA6 A;  3D00 A;  3SGQ I;  2QPO A;  1CGI I;  2KMQ A;  1R0R I;  2K9H A;  2N52 A;  1ULM A;  1UUC A;  2V1C C;  1SGQ I;  2OZU A;  2KMP A;  4FKD A;  2NU3 I;  1Z2I A;  3UEJ A;  2YQP A;  3FSY A;  5EX0 A;  2ODD A;  1HDL A;  2WCY A;  3OXF A;  1P9Z A;  2N71 A;  1TIH A;  2RC4 A;  4UXJ A;  1HJA I;  1BUS A; 
#chains in the Genus database with same CATH homology
 2CJS C;  2JW6 A;  1R79 A;  1TBQ R;  1H0Z A;  2UZ3 A;  4A24 A;  4B6D A;  1VDD A;  1AN1 I;  2NU2 I;  1UVF A;  1TBN A;  4L9M A;  1FYB A;  2N17 A;  5DAE A;  1PCE A;  1YTP A;  1CE3 A;  2LEO A;  1KBE A;  2ROW A;  3HH2 C;  3CXL A;  5FUV A;  3UEY A;  1XBT A;  1PPF I;  2F3C I;  2KMR A;  2GVI A;  4UXI A;  1OYV I;  1CT2 I;  1X4S A;  2LUY A;  3OVO A;  2P6A C;  2QQD A;  2VRW B;  2J87 A;  3KY9 A;  5EX3 A;  5FUY A;  2JXD A;  5HI7 A;  2OVO A;  1KMA A;  2SGD I;  3RU0 A;  3UGL A;  1TBO A;  1SGE I;  2KMO A;  2QQC A;  1OMT A;  2NU1 I;  2M5X A;  1CSO I;  1CHO I;  1TGS I;  3GOX A;  1HPT A;  1TOT A;  1PTQ A;  2DIP A;  2JYY A;  3MEK A;  1Z7K B;  2SGF I;  5FUW A;  2DB6 A;  1YU6 C;  2E73 A;  2BUS A;  5JHW C;  1UVG A;  1IY5 A;  1KBF A;  2SGP I;  4OVO A;  1IY6 A;  1LR8 A;  1SGN I;  1TUR A;  1W3S A;  3B4V C;  2GKT I;  1FAQ A;  3SGB I;  1Y1C A;  4GI3 C;  1CT4 I;  2SGQ I;  2J9R A;  3SEK C;  1DS2 I;  2WVJ A;  1FAR A;  2NU0 I;  1OMU A;  2L7X A;  3OL0 A;  2B8T A;  4HGU A;  1SGP I;  1SGR I;  5CCL A;  2A20 A;  3VDU A;  1BMO A;  1W4R A;  1TUS A;  3BJI A;  1LR9 A;  2ELI A;  2V53 A;  4UXH A;  1Y1B A;  2XRC A;  2NU4 I;  1U5K A;  2ORV A;  2N1A B;  2ORW A;  3FC3 A;  1PJU A;  2W0T A;  3VE5 A;  1OVO A;  3UGI A;  1IW4 A;  3E2I A;  1RFH A;  3UFF A;  2FNF X;  2QQE A;  2GKR I;  2YUU A;  2SGE I;  1MT1 A;  1M8C A;  2V1C A;  2L8E A;  2OD1 A;  4E1R A;  5FUX A;  2B0U C;  1CT0 I;  1M8B A;  2QQ0 A;  1SGD I;  1DS3 I;  3VDP A;  2GKV A;  2JZM A;  3TJQ A;  1LR7 A;  4SGB I;  1XX6 A;  1V1H A;  5CCM A;  2ENZ A;  2E5R A;  3UGD A;  1X74 A;  1TBR R;  1CGJ I;  2ERW A;  2JA1 A;  2KCX A;  3QWP A;  4JCV E;  1V1I A;  1SGY I;  2ARP F;  5HQ8 A;  3OXL A;  3OXG A;  1N13 A;  1NUB A;  1PTR A;  2ENN A;  3PDN A;  4E1P A;  3E59 A;  1Y8F A;  3QTL D;  1XA6 A;  3D00 A;  3SGQ I;  2QPO A;  1CGI I;  2KMQ A;  1R0R I;  2K9H A;  2N52 A;  1UUC A;  2V1C C;  1SGQ I;  2KMP A;  4FKD A;  2NU3 I;  3UEJ A;  2YQP A;  5EX0 A;  2ODD A;  1HDL A;  2WCY A;  3OXF A;  2N71 A;  1TIH A;  4UXJ A;  1HJA I;  1BUS A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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