1X4SA

Solution structure of zinc finger hit domain in protein fon
Total Genus 6
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
6
sequence length
59
structure length
59
Chain Sequence
GSSGSSGMEPAGPCGFCPAGEVQPARYTCPRCNAPYCSLRCYRTHGTCAENFYSGPSSG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Metal binding protein
source organism Homo sapiens
publication title Solution structure of the zinc finger HIT domain in protein FON
pubmed doi rcsb
molecule keywords Zinc finger HIT domain containing protein 2
total genus 6
structure length 59
sequence length 59
ec nomenclature
pdb deposition date 2005-05-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF04438 zf-HIT HIT zinc finger
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.190 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1x4sA00
1X4SA
chains in the Genus database with same CATH superfamily
2WVJA 2GVIA 5CCMA 2KMQA 2QQEA 1PCEA 2KMOA 1TBNA 4OVOA 1FAQA 1UVGA 4MPIA 3R5BA 2VRWB 2OU2A 1X4SA 1YTPA 3UGLA 3UFFA 4UXHA 4AMLA 3TOAA 2ROWA 3FSYA 1SGNI 1TURA 5JHWC 2ORVA 1ULNA 1HJAI 2L7XA 5E3QA 2J87A 1NUBA 2LB7A 2QQ0A 3QTLD 3UEJA 1KMAA 1P9GA 1R79A 4UXJA 1Y8FA 2DB6A 1CGII 1Z2IA 2RIJA 4HGUA 1OVOA 4UXIA 1WTJA 4B6DA 2NU3I 2NU4I 3OL0A 4GI3C 1OMTA 9WGAA 3VDPA 2JZMA 3TO9A 1RFHA 2N1AB 3SGQI 4SGBI 2J9RA 3GOXA 1OMUA 1BMOA 2GIVA 2CWGA 2JW6A 1M8CA 2KCXA 3R5CA 3VDUA 1LR7A 1TOTA 1SGEI 4E1RA 1IY6A 7WGAA 1N13A 3TO7A 1CE3A 1PJUA 3OXLA 4A24A 2RC4A 1PTRA 2SGFI 2X3TA 3QAHA 1VDDA 5J8FA 1SGDI 1TUSA 2YUUA 1IW4A 2NU1I 2F3CI 3CXLA 1AN1I 1TBRR 5FUXA 1H0ZA 5HQ8A 2N17A 2ERWA 1V1HA 1ULMA 2QQCA 2X52A 1UUCA 4JCVE 3FC3A 1M8BA 1HPTA 2L8EA 2B8TA 2BUSA 2KMRA 2LUYA 1Y1BA 2CWHA 4FKDA 5FUWA 1CT2I 1V1IA 2JYYA 2XRCA 1XA6A 3UEYA 2W0TA 1XBTA 2NU0I 2DIPA 1NXUA 1YU6C 1LR8A 5J8CA 2V1CC 2E5RA 1KBEA 3BJIA 5FUVA 1PPFI 3E59A 1TIHA 2OVOA 2DKVA 5DAEA 5CCLA 1MJAA 2SGDI 5HI7A 2N71A 1K7VA 1CT0I 5FUYA 2K9HA 1PTQA 2WGCA 2OZUA 3OVOA 2P6AC 1LR9A 4L9MA 1FY7A 2NU2I 2CWFA 3R5AA 1MJBA 5EX0A 2GKVA 1XX6A 1UVFA 2ENZA 2B0UC 2ENNA 2SGEI 2UVOA 2ODDA 3UOEA 1IY5A 2LEOA 3B4VC 1ULKA 2ELIA 2JXDA 3MEKA 2CJSC 2JA1A 3TOBA 1WGTA 3UGIA 4DNCA 1R0RI 3HH2C 3QWPA 1DS3I 3FSXA 2FNFX 2GKTI 1TGSI 3PDNA 1Q9BA 2V53A 2UZ3A 3D00A 3UGDA 1K7TA 1BUSA 1HEVA 2ORWA 2GKRI 1UHAA 1TBQR 1CHOI 2QQDA 1SGQI 3E2IA 1OYVI 1SGPI 1WGCA 2ARPF 2WCYA 1Y1CA 2YQPA 5E3PA 2OD1A 1CSOI 3KY9A 2KMPA 1Z7KB 3SEKC 3TJQA 3OXFA 2M5XA 2QPOA 1WKXA 1CGJI 2PQ8A 5EX3A 5E3RA 3VE5A 1K7UA 2V1CA 2SGPI 4E1PA 2N52A 4WP4A 3RU0A 1KBFA 1W4RA 1MT1A 3OXGA 1P9ZA 2E73A 1S20A 1TBOA 1MJ9A 1DS2I 1U5KA 2A20A 3TO6A 1CT4I 1SGYI 1FYBA 1SGRI 1W3SA 3R5DA 2Y0MA 1X74A 1HDLA 3SGBI 1FARA 2SGQI
chains in the Genus database with same CATH topology
2WVJA 2GVIA 5CCMA 2KMQA 2QQEA 1PCEA 2KMOA 1TBNA 4OVOA 1FAQA 1UVGA 2VRWB 1X4SA 1YTPA 3UGLA 3UFFA 4UXHA 2ROWA 1SGNI 1TURA 5JHWC 2ORVA 2L7XA 1HJAI 3UEJA 2J87A 1NUBA 1KMAA 2QQ0A 3QTLD 1R79A 4UXJA 1Y8FA 2DB6A 1CGII 4HGUA 4UXIA 1OVOA 4B6DA 2NU3I 2NU4I 3OL0A 4GI3C 1OMTA 3VDPA 2JZMA 3GOXA 1RFHA 2N1AB 3SGQI 4SGBI 2J9RA 1OMUA 1BMOA 2JW6A 2KCXA 3VDUA 1M8CA 4E1RA 1IY6A 1LR7A 1TOTA 1SGEI 1N13A 1CE3A 1PJUA 3OXLA 4A24A 1PTRA 2SGFI 1VDDA 1IW4A 1SGDI 1TUSA 2YUUA 2NU1I 2F3CI 3CXLA 1AN1I 1TBRR 5FUXA 1H0ZA 5HQ8A 2N17A 2ERWA 1V1HA 2QQCA 1UUCA 4JCVE 3FC3A 1M8BA 1HPTA 2L8EA 2B8TA 2BUSA 2KMRA 2LUYA 1Y1BA 5FUWA 4FKDA 3UEYA 1CT2I 1V1IA 2JYYA 2XRCA 1XA6A 2W0TA 1XBTA 2NU0I 2DIPA 1YU6C 1LR8A 2V1CC 2E5RA 1KBEA 3BJIA 5FUVA 1PPFI 3E59A 1TIHA 2OVOA 5DAEA 5CCLA 2SGDI 5HI7A 2N71A 5FUYA 1CT0I 2K9HA 1PTQA 3OVOA 2P6AC 1LR9A 4L9MA 2NU2I 5EX0A 2GKVA 1XX6A 1UVFA 2ENZA 2B0UC 2ENNA 2SGEI 2ODDA 1IY5A 2LEOA 3B4VC 2ELIA 3MEKA 2JXDA 2CJSC 2JA1A 3UGIA 1R0RI 3HH2C 3QWPA 1DS3I 2FNFX 2GKTI 1TGSI 3PDNA 2V53A 2UZ3A 3D00A 3UGDA 1BUSA 2ORWA 2GKRI 1TBQR 1CHOI 2QQDA 1SGQI 3E2IA 1OYVI 1SGPI 2ARPF 2WCYA 1Y1CA 2YQPA 2OD1A 1CSOI 3KY9A 2KMPA 1Z7KB 3SEKC 3TJQA 3OXFA 2M5XA 2QPOA 5EX3A 1CGJI 3VE5A 2V1CA 2SGPI 4E1PA 2N52A 1KBFA 3RU0A 1W4RA 1MT1A 3OXGA 2E73A 1TBOA 1DS2I 2A20A 1U5KA 1FYBA 1CT4I 1SGYI 1SGRI 1W3SA 1X74A 1HDLA 3SGBI 1FARA 2SGQI
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1X4S A; 
#chains in the Genus database with same CATH topology
 2WVJ A;  2GVI A;  5CCM A;  2KMQ A;  2QQE A;  1PCE A;  2KMO A;  1TBN A;  4OVO A;  1FAQ A;  1UVG A;  4MPI A;  3R5B A;  2VRW B;  2OU2 A;  1X4S A;  1YTP A;  3UGL A;  3UFF A;  4UXH A;  4AML A;  3TOA A;  2ROW A;  3FSY A;  1SGN I;  1TUR A;  5JHW C;  2ORV A;  1ULN A;  1HJA I;  2L7X A;  5E3Q A;  2J87 A;  1NUB A;  2LB7 A;  2QQ0 A;  3QTL D;  3UEJ A;  1KMA A;  1P9G A;  1R79 A;  4UXJ A;  1Y8F A;  2DB6 A;  1CGI I;  1Z2I A;  2RIJ A;  4HGU A;  1OVO A;  4UXI A;  1WTJ A;  4B6D A;  2NU3 I;  2NU4 I;  3OL0 A;  4GI3 C;  1OMT A;  9WGA A;  3VDP A;  2JZM A;  3TO9 A;  1RFH A;  2N1A B;  3SGQ I;  4SGB I;  2J9R A;  3GOX A;  1OMU A;  1BMO A;  2GIV A;  2CWG A;  2JW6 A;  1M8C A;  2KCX A;  3R5C A;  3VDU A;  1LR7 A;  1TOT A;  1SGE I;  4E1R A;  1IY6 A;  7WGA A;  1N13 A;  3TO7 A;  1CE3 A;  1PJU A;  3OXL A;  4A24 A;  2RC4 A;  1PTR A;  2SGF I;  2X3T A;  3QAH A;  1VDD A;  5J8F A;  1SGD I;  1TUS A;  2YUU A;  1IW4 A;  2NU1 I;  2F3C I;  3CXL A;  1AN1 I;  1TBR R;  5FUX A;  1H0Z A;  5HQ8 A;  2N17 A;  2ERW A;  1V1H A;  1ULM A;  2QQC A;  2X52 A;  1UUC A;  4JCV E;  3FC3 A;  1M8B A;  1HPT A;  2L8E A;  2B8T A;  2BUS A;  2KMR A;  2LUY A;  1Y1B A;  2CWH A;  4FKD A;  5FUW A;  1CT2 I;  1V1I A;  2JYY A;  2XRC A;  1XA6 A;  3UEY A;  2W0T A;  1XBT A;  2NU0 I;  2DIP A;  1NXU A;  1YU6 C;  1LR8 A;  5J8C A;  2V1C C;  2E5R A;  1KBE A;  3BJI A;  5FUV A;  1PPF I;  3E59 A;  1TIH A;  2OVO A;  2DKV A;  5DAE A;  5CCL A;  1MJA A;  2SGD I;  5HI7 A;  2N71 A;  1K7V A;  1CT0 I;  5FUY A;  2K9H A;  1PTQ A;  2WGC A;  2OZU A;  3OVO A;  2P6A C;  1LR9 A;  4L9M A;  1FY7 A;  2NU2 I;  2CWF A;  3R5A A;  1MJB A;  5EX0 A;  2GKV A;  1XX6 A;  1UVF A;  2ENZ A;  2B0U C;  2ENN A;  2SGE I;  2UVO A;  2ODD A;  3UOE A;  1IY5 A;  2LEO A;  3B4V C;  1ULK A;  2ELI A;  2JXD A;  3MEK A;  2CJS C;  2JA1 A;  3TOB A;  1WGT A;  3UGI A;  4DNC A;  1R0R I;  3HH2 C;  3QWP A;  1DS3 I;  3FSX A;  2FNF X;  2GKT I;  1TGS I;  3PDN A;  1Q9B A;  2V53 A;  2UZ3 A;  3D00 A;  3UGD A;  1K7T A;  1BUS A;  1HEV A;  2ORW A;  2GKR I;  1UHA A;  1TBQ R;  1CHO I;  2QQD A;  1SGQ I;  3E2I A;  1OYV I;  1SGP I;  1WGC A;  2ARP F;  2WCY A;  1Y1C A;  2YQP A;  5E3P A;  2OD1 A;  1CSO I;  3KY9 A;  2KMP A;  1Z7K B;  3SEK C;  3TJQ A;  3OXF A;  2M5X A;  2QPO A;  1WKX A;  1CGJ I;  2PQ8 A;  5EX3 A;  5E3R A;  3VE5 A;  1K7U A;  2V1C A;  2SGP I;  4E1P A;  2N52 A;  4WP4 A;  3RU0 A;  1KBF A;  1W4R A;  1MT1 A;  3OXG A;  1P9Z A;  2E73 A;  1S20 A;  1TBO A;  1MJ9 A;  1DS2 I;  1U5K A;  2A20 A;  3TO6 A;  1CT4 I;  1SGY I;  1FYB A;  1SGR I;  1W3S A;  3R5D A;  2Y0M A;  1X74 A;  1HDL A;  3SGB I;  1FAR A;  2SGQ I; 
#chains in the Genus database with same CATH homology
 2WVJ A;  2GVI A;  5CCM A;  2KMQ A;  2QQE A;  1PCE A;  2KMO A;  1TBN A;  4OVO A;  1FAQ A;  1UVG A;  2VRW B;  1X4S A;  1YTP A;  3UGL A;  3UFF A;  4UXH A;  2ROW A;  1SGN I;  1TUR A;  5JHW C;  2ORV A;  2L7X A;  1HJA I;  3UEJ A;  2J87 A;  1NUB A;  1KMA A;  2QQ0 A;  3QTL D;  1R79 A;  4UXJ A;  1Y8F A;  2DB6 A;  1CGI I;  4HGU A;  4UXI A;  1OVO A;  4B6D A;  2NU3 I;  2NU4 I;  3OL0 A;  4GI3 C;  1OMT A;  3VDP A;  2JZM A;  3GOX A;  1RFH A;  2N1A B;  3SGQ I;  4SGB I;  2J9R A;  1OMU A;  1BMO A;  2JW6 A;  2KCX A;  3VDU A;  1M8C A;  4E1R A;  1IY6 A;  1LR7 A;  1TOT A;  1SGE I;  1N13 A;  1CE3 A;  1PJU A;  3OXL A;  4A24 A;  1PTR A;  2SGF I;  1VDD A;  1IW4 A;  1SGD I;  1TUS A;  2YUU A;  2NU1 I;  2F3C I;  3CXL A;  1AN1 I;  1TBR R;  5FUX A;  1H0Z A;  5HQ8 A;  2N17 A;  2ERW A;  1V1H A;  2QQC A;  1UUC A;  4JCV E;  3FC3 A;  1M8B A;  1HPT A;  2L8E A;  2B8T A;  2BUS A;  2KMR A;  2LUY A;  1Y1B A;  5FUW A;  4FKD A;  3UEY A;  1CT2 I;  1V1I A;  2JYY A;  2XRC A;  1XA6 A;  2W0T A;  1XBT A;  2NU0 I;  2DIP A;  1YU6 C;  1LR8 A;  2V1C C;  2E5R A;  1KBE A;  3BJI A;  5FUV A;  1PPF I;  3E59 A;  1TIH A;  2OVO A;  5DAE A;  5CCL A;  2SGD I;  5HI7 A;  2N71 A;  5FUY A;  1CT0 I;  2K9H A;  1PTQ A;  3OVO A;  2P6A C;  1LR9 A;  4L9M A;  2NU2 I;  5EX0 A;  2GKV A;  1XX6 A;  1UVF A;  2ENZ A;  2B0U C;  2ENN A;  2SGE I;  2ODD A;  1IY5 A;  2LEO A;  3B4V C;  2ELI A;  3MEK A;  2JXD A;  2CJS C;  2JA1 A;  3UGI A;  1R0R I;  3HH2 C;  3QWP A;  1DS3 I;  2FNF X;  2GKT I;  1TGS I;  3PDN A;  2V53 A;  2UZ3 A;  3D00 A;  3UGD A;  1BUS A;  2ORW A;  2GKR I;  1TBQ R;  1CHO I;  2QQD A;  1SGQ I;  3E2I A;  1OYV I;  1SGP I;  2ARP F;  2WCY A;  1Y1C A;  2YQP A;  2OD1 A;  1CSO I;  3KY9 A;  2KMP A;  1Z7K B;  3SEK C;  3TJQ A;  3OXF A;  2M5X A;  2QPO A;  5EX3 A;  1CGJ I;  3VE5 A;  2V1C A;  2SGP I;  4E1P A;  2N52 A;  1KBF A;  3RU0 A;  1W4R A;  1MT1 A;  3OXG A;  2E73 A;  1TBO A;  1DS2 I;  2A20 A;  1U5K A;  1FYB A;  1CT4 I;  1SGY I;  1SGR I;  1W3S A;  1X74 A;  1HDL A;  3SGB I;  1FAR A;  2SGQ I; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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