1XHNA

The crystal structure of cellular repressor of e1a-stimulated genes (creg)
Total Genus 43
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
43
sequence length
172
structure length
172
Chain Sequence
GSLPPREDAARVARFVTHVSDWGALATISTLEAVRGRPFADVLSLSDGPPGAGSGVPYFYLSPLQLSVSNLQENPYATLTMTLAQTNFCKKHGFDPQSPLCVHIMLSGTVTKVNETEMDIAKHSLFIRHPEMKTWPSSHNWFFAKLNITNIWVLDYFGGPKIVTPEEYYNVT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Unknown function
molecule keywords Cellular Repressor of E1A-stimulated Genes
publication title The crystal structure of CREG, a secreted glycoprotein involved in cellular growth and differentiation
pubmed doi rcsb
source organism Homo sapiens
total genus 43
structure length 172
sequence length 172
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2004-09-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF13883 Pyrid_oxidase_2 Pyridoxamine 5'-phosphate oxidase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.110.10 Mainly Beta Roll Pnp Oxidase; Chain A Electron Transport, Fmn-binding Protein; Chain A 1xhnA01
5CHOA 1RFEA 2R0XA 3BA3A 3R5WA 3VY5A 3BNKA 2RDEA 1USFA 1TY9A 1G79A 1NRGA 1RZ0A 2VPAA 1T9MA 4L82A 1DNLA 2IG6A 2Q9KA 1VL7A 2R6VA 3ZOCA 3BPKA 2FURA 1W9AA 3PFTA 1WGBA 1I0RA 2RE7A 1Y30A 1WLIA 4HMWA 3EC6A 4R82A 3E4VA 1EJEA 4XHYA 2D37A 2ASFA 3A6RA 3DMBA 2HQ7A 1I0SA 2QEAA 4Y9IA 4HMVA 2E83A 3CP3A 3U0IA 3GASA 4YWNA 4F07A 1G77A 2D38A 2FG9A 3NFWA 3AWHA 2ED4A 3B5MA 5JABA 4XJ2A 2HHZA 1W3RA 3R5PA 3A20A 3ZOFA 2HTIA 5BNCA 3ZOHA 2OU5A 3R5LA 1FLMA 3RH7A 1JNWA 3AMFA 3FKHA 1RZ1A 4Z85A 4HX6A 3U35A 3R5YA 1USCA 2D5MA 2FHQA 2IABA 3ZODA 3U34A 3DB0A 3R5RA 2OL5A 2GJGA 4ZKYA 2X1KA 1W3QA 1XXOA 1G78A 2A2JA 2X1JA 3DNHA 2HQ9A 3KYGA 3CB0A 3TGVA 2ARZA 2IMLA 1YLNA 1G76A 5CHEC 2ECUA 4YBNA 3ZOGA 4HMSA 4QVBA 2I02A 1WV4A 2HTDA 3HY8A 3VY2A 3IN6A 1W3OA 4HMXA 5ESCA 3ZOEA 2NR4A 2I51A 3K86A 3SWJA 1AXJA 3A6QA 4HMUA 2QCKA 2AQ6A 4N7RC 2PTFA 3R5ZA 4IRAA 3FGEA 3VYAA 3K88A 3U5WA 3HMZA 3K87A 1W3PA 3F7EA 3KYFA 1XHNA 1WLKA 1CI0A 1YOAA 2D36A 3H96A 2ECRA 4HMTA
chains in the Genus database with same CATH superfamily
5CHOA 1RFEA 2P5ZX 2R0XA 3BA3A 3R5WA 3VY5A 3BNKA 2RDEA 1USFA 2K4QA 1TY9A 1G79A 4HKHA 1NRGA 1RZ0A 2VPAA 1T9MA 4L82A 1DNLA 2IG6A 2Q9KA 1VL7A 2R6VA 3ZOCA 3BPKA 2FURA 1W9AA 3PFTA 1WGBA 1I0RA 3V4HA 2RE7A 1Y30A 1WLIA 4HMWA 3EC6A 4R82A 3E4VA 1EJEA 4XHYA 2D37A 2ASFA 3A6RA 3DMBA 2HQ7A 1I0SA 2QEAA 4Y9IA 4HMVA 2E83A 3CP3A 3U0IA 3GASA 4YWNA 4F07A 1G77A 2D38A 2FG9A 3NFWA 3AWHA 2ED4A 3B5MA 5JABA 4XJ2A 2HHZA 1W3RA 3R5PA 3A20A 3ZOFA 2HTIA 5BNCA 3ZOHA 2OU5A 3R5LA 1FLMA 3RH7A 1JNWA 3AMFA 3FKHA 1RZ1A 4Z85A 4HX6A 3U35A 2L1TA 3R5YA 1USCA 2D5MA 2FHQA 2IABA 3ZODA 3U34A 3DB0A 3HE1A 3R5RA 2OL5A 2GJGA 4ZKYA 2X1KA 1W3QA 1XXOA 1G78A 2A2JA 2X1JA 3DNHA 1Y12A 2HQ9A 3KYGA 3CB0A 3TGVA 2ARZA 2IMLA 1YLNA 1G76A 5CHEC 2ECUA 4YBNA 4TV4A 3ZOGA 4HMSA 4UHVA 4QVBA 2I02A 1WV4A 2HTDA 3HY8A 3VY2A 3IN6A 1W3OA 4HMXA 5ESCA 3ZOEA 2NR4A 2I51A 3EAAA 3K86A 4W64A 3SWJA 1AXJA 3A6QA 4HMUA 2QCKA 2AQ6A 4N7RC 2PTFA 3R5ZA 4IRAA 3FGEA 3VYAA 3K88A 3U5WA 2GUJA 3HMZA 3K87A 1W3PA 3F7EA 3KYFA 4MTKA 1XHNA 1WLKA 1CI0A 1YOAA 2D36A 3H96A 2ECRA 4HMTA
chains in the Genus database with same CATH topology
5CHOA 1RFEA 2R0XA 3BA3A 3R5WA 3VY5A 3BNKA 2RDEA 1USFA 1TY9A 1G79A 1NRGA 1RZ0A 2VPAA 1T9MA 4L82A 1DNLA 2IG6A 2Q9KA 1VL7A 2R6VA 3ZOCA 3BPKA 2FURA 1W9AA 3PFTA 1WGBA 1I0RA 2RE7A 1Y30A 1WLIA 4HMWA 3EC6A 4R82A 3E4VA 1EJEA 4XHYA 2D37A 2ASFA 3A6RA 3DMBA 2HQ7A 1I0SA 2QEAA 4Y9IA 4HMVA 2E83A 3CP3A 3U0IA 3GASA 4YWNA 4F07A 1G77A 2D38A 2FG9A 3NFWA 3AWHA 2ED4A 3B5MA 5JABA 4XJ2A 2HHZA 1W3RA 3R5PA 3A20A 3ZOFA 2HTIA 5BNCA 3ZOHA 2OU5A 3R5LA 1FLMA 3RH7A 1JNWA 3AMFA 3FKHA 1RZ1A 4Z85A 4HX6A 3U35A 3R5YA 1USCA 2D5MA 2FHQA 2IABA 3ZODA 3U34A 3DB0A 3R5RA 2OL5A 2GJGA 4ZKYA 2X1KA 1W3QA 1XXOA 1G78A 2A2JA 2X1JA 3DNHA 2HQ9A 3KYGA 3CB0A 3TGVA 2ARZA 2IMLA 1YLNA 1G76A 5CHEC 2ECUA 4YBNA 3ZOGA 4HMSA 4QVBA 2I02A 1WV4A 2HTDA 3HY8A 3VY2A 3IN6A 1W3OA 4HMXA 5ESCA 3ZOEA 2NR4A 2I51A 3K86A 3SWJA 1AXJA 3A6QA 4HMUA 2QCKA 2AQ6A 4N7RC 2PTFA 3R5ZA 4IRAA 3FGEA 3VYAA 3K88A 3U5WA 3HMZA 3K87A 1W3PA 3F7EA 3KYFA 1XHNA 1WLKA 1CI0A 1YOAA 2D36A 3H96A 2ECRA 4HMTA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5CHO A;  1RFE A;  2R0X A;  3BA3 A;  3R5W A;  3VY5 A;  3BNK A;  2RDE A;  1USF A;  1TY9 A;  1G79 A;  1NRG A;  1RZ0 A;  2VPA A;  1T9M A;  4L82 A;  1DNL A;  2IG6 A;  2Q9K A;  1VL7 A;  2R6V A;  3ZOC A;  3BPK A;  2FUR A;  1W9A A;  3PFT A;  1WGB A;  1I0R A;  2RE7 A;  1Y30 A;  1WLI A;  4HMW A;  3EC6 A;  4R82 A;  3E4V A;  1EJE A;  4XHY A;  2D37 A;  2ASF A;  3A6R A;  3DMB A;  2HQ7 A;  1I0S A;  2QEA A;  4Y9I A;  4HMV A;  2E83 A;  3CP3 A;  3U0I A;  3GAS A;  4YWN A;  4F07 A;  1G77 A;  2D38 A;  2FG9 A;  3NFW A;  3AWH A;  2ED4 A;  3B5M A;  5JAB A;  4XJ2 A;  2HHZ A;  1W3R A;  3R5P A;  3A20 A;  3ZOF A;  2HTI A;  5BNC A;  3ZOH A;  2OU5 A;  3R5L A;  1FLM A;  3RH7 A;  1JNW A;  3AMF A;  3FKH A;  1RZ1 A;  4Z85 A;  4HX6 A;  3U35 A;  3R5Y A;  1USC A;  2D5M A;  2FHQ A;  2IAB A;  3ZOD A;  3U34 A;  3DB0 A;  3R5R A;  2OL5 A;  2GJG A;  4ZKY A;  2X1K A;  1W3Q A;  1XXO A;  1G78 A;  2A2J A;  2X1J A;  3DNH A;  2HQ9 A;  3KYG A;  3CB0 A;  3TGV A;  2ARZ A;  2IML A;  1YLN A;  1G76 A;  5CHE C;  2ECU A;  4YBN A;  3ZOG A;  4HMS A;  4QVB A;  2I02 A;  1WV4 A;  2HTD A;  3HY8 A;  3VY2 A;  3IN6 A;  1W3O A;  4HMX A;  5ESC A;  3ZOE A;  2NR4 A;  2I51 A;  3K86 A;  3SWJ A;  1AXJ A;  3A6Q A;  4HMU A;  2QCK A;  2AQ6 A;  4N7R C;  2PTF A;  3R5Z A;  4IRA A;  3FGE A;  3VYA A;  3K88 A;  3U5W A;  3HMZ A;  3K87 A;  1W3P A;  3F7E A;  3KYF A;  1XHN A;  1WLK A;  1CI0 A;  1YOA A;  2D36 A;  3H96 A;  2ECR A;  4HMT A; 
#chains in the Genus database with same CATH topology
 5CHO A;  1RFE A;  2P5Z X;  2R0X A;  3BA3 A;  3R5W A;  3VY5 A;  3BNK A;  2RDE A;  1USF A;  2K4Q A;  1TY9 A;  1G79 A;  4HKH A;  1NRG A;  1RZ0 A;  2VPA A;  1T9M A;  4L82 A;  1DNL A;  2IG6 A;  2Q9K A;  1VL7 A;  2R6V A;  3ZOC A;  3BPK A;  2FUR A;  1W9A A;  3PFT A;  1WGB A;  1I0R A;  3V4H A;  2RE7 A;  1Y30 A;  1WLI A;  4HMW A;  3EC6 A;  4R82 A;  3E4V A;  1EJE A;  4XHY A;  2D37 A;  2ASF A;  3A6R A;  3DMB A;  2HQ7 A;  1I0S A;  2QEA A;  4Y9I A;  4HMV A;  2E83 A;  3CP3 A;  3U0I A;  3GAS A;  4YWN A;  4F07 A;  1G77 A;  2D38 A;  2FG9 A;  3NFW A;  3AWH A;  2ED4 A;  3B5M A;  5JAB A;  4XJ2 A;  2HHZ A;  1W3R A;  3R5P A;  3A20 A;  3ZOF A;  2HTI A;  5BNC A;  3ZOH A;  2OU5 A;  3R5L A;  1FLM A;  3RH7 A;  1JNW A;  3AMF A;  3FKH A;  1RZ1 A;  4Z85 A;  4HX6 A;  3U35 A;  2L1T A;  3R5Y A;  1USC A;  2D5M A;  2FHQ A;  2IAB A;  3ZOD A;  3U34 A;  3DB0 A;  3HE1 A;  3R5R A;  2OL5 A;  2GJG A;  4ZKY A;  2X1K A;  1W3Q A;  1XXO A;  1G78 A;  2A2J A;  2X1J A;  3DNH A;  1Y12 A;  2HQ9 A;  3KYG A;  3CB0 A;  3TGV A;  2ARZ A;  2IML A;  1YLN A;  1G76 A;  5CHE C;  2ECU A;  4YBN A;  4TV4 A;  3ZOG A;  4HMS A;  4UHV A;  4QVB A;  2I02 A;  1WV4 A;  2HTD A;  3HY8 A;  3VY2 A;  3IN6 A;  1W3O A;  4HMX A;  5ESC A;  3ZOE A;  2NR4 A;  2I51 A;  3EAA A;  3K86 A;  4W64 A;  3SWJ A;  1AXJ A;  3A6Q A;  4HMU A;  2QCK A;  2AQ6 A;  4N7R C;  2PTF A;  3R5Z A;  4IRA A;  3FGE A;  3VYA A;  3K88 A;  3U5W A;  2GUJ A;  3HMZ A;  3K87 A;  1W3P A;  3F7E A;  3KYF A;  4MTK A;  1XHN A;  1WLK A;  1CI0 A;  1YOA A;  2D36 A;  3H96 A;  2ECR A;  4HMT A; 
#chains in the Genus database with same CATH homology
 5CHO A;  1RFE A;  2R0X A;  3BA3 A;  3R5W A;  3VY5 A;  3BNK A;  2RDE A;  1USF A;  1TY9 A;  1G79 A;  1NRG A;  1RZ0 A;  2VPA A;  1T9M A;  4L82 A;  1DNL A;  2IG6 A;  2Q9K A;  1VL7 A;  2R6V A;  3ZOC A;  3BPK A;  2FUR A;  1W9A A;  3PFT A;  1WGB A;  1I0R A;  2RE7 A;  1Y30 A;  1WLI A;  4HMW A;  3EC6 A;  4R82 A;  3E4V A;  1EJE A;  4XHY A;  2D37 A;  2ASF A;  3A6R A;  3DMB A;  2HQ7 A;  1I0S A;  2QEA A;  4Y9I A;  4HMV A;  2E83 A;  3CP3 A;  3U0I A;  3GAS A;  4YWN A;  4F07 A;  1G77 A;  2D38 A;  2FG9 A;  3NFW A;  3AWH A;  2ED4 A;  3B5M A;  5JAB A;  4XJ2 A;  2HHZ A;  1W3R A;  3R5P A;  3A20 A;  3ZOF A;  2HTI A;  5BNC A;  3ZOH A;  2OU5 A;  3R5L A;  1FLM A;  3RH7 A;  1JNW A;  3AMF A;  3FKH A;  1RZ1 A;  4Z85 A;  4HX6 A;  3U35 A;  3R5Y A;  1USC A;  2D5M A;  2FHQ A;  2IAB A;  3ZOD A;  3U34 A;  3DB0 A;  3R5R A;  2OL5 A;  2GJG A;  4ZKY A;  2X1K A;  1W3Q A;  1XXO A;  1G78 A;  2A2J A;  2X1J A;  3DNH A;  2HQ9 A;  3KYG A;  3CB0 A;  3TGV A;  2ARZ A;  2IML A;  1YLN A;  1G76 A;  5CHE C;  2ECU A;  4YBN A;  3ZOG A;  4HMS A;  4QVB A;  2I02 A;  1WV4 A;  2HTD A;  3HY8 A;  3VY2 A;  3IN6 A;  1W3O A;  4HMX A;  5ESC A;  3ZOE A;  2NR4 A;  2I51 A;  3K86 A;  3SWJ A;  1AXJ A;  3A6Q A;  4HMU A;  2QCK A;  2AQ6 A;  4N7R C;  2PTF A;  3R5Z A;  4IRA A;  3FGE A;  3VYA A;  3K88 A;  3U5W A;  3HMZ A;  3K87 A;  1W3P A;  3F7E A;  3KYF A;  1XHN A;  1WLK A;  1CI0 A;  1YOA A;  2D36 A;  3H96 A;  2ECR A;  4HMT A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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