1XR4A

X-ray crystal structure of putative citrate lyase alpha chain/citrate-acp transferase [salmonella typhimurium]
Total Genus 164
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
164
sequence length
506
structure length
506
Chain Sequence
AMKETVTMLNQQYVVPEGLQPYQGVTANSPWLASETEKRRRKICDSLEEAIRRSGLKNGMTISFHHAFRGGDKVVNMVMAKLAEMGFRDLTLASSSLIDAHWPLIEHIKNGVVRQIYTSGLRGKLGEEISAGLMENPVQIHSHGGRVKLIQSGELNIDVAFLGVPCCDEFGNANGFSGKSRCGSLGYAQVDAQYAKCVVLLTEEWVEFPNYPASIAQDQVDLIVQVDEVGDPEKITAGAIRLSSNPRELLIARQAANVIEHSGYFCDGFSLQTGTGGASLAVTRFLEDKMRRHNITASFGLGGITGTMVDLHEKGLIKALLDTQSFDGDAARSLAQNPHHIEISTNQYANPASKGAACERLNVVMLSALEIDVNFNVNVMTGSNGVLRGASGGHSDTAAGADLTIITAPLVRGRIPCVVEKVLTTVTPGASVDVLVTDHGIAVNPARQDLLDNLRAAGVALMTIEQLQQRAEQLTGKPQPIEFTDRVVAVVRYRDGSVIDVIRQVK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords putative citrate lyase alpha chain/citrate-ACP transferase
publication title X-ray crystal structure of putative citrate lyase alpha chain/citrate-ACP transferase from Salmonella typhimurium.
rcsb
source organism Salmonella typhimurium
molecule tags Hydrolase/transferase
total genus 164
structure length 506
sequence length 506
chains with identical sequence B
ec nomenclature
pdb deposition date 2004-10-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF04223 CitF Citrate lyase, alpha subunit (CitF)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1080.10 Alpha Beta 3-Layer(aba) Sandwich Glutaconate Coenzyme A-transferase Glutaconate Coenzyme A-transferase 1xr4A01
3.40.1080.10 Alpha Beta 3-Layer(aba) Sandwich Glutaconate Coenzyme A-transferase Glutaconate Coenzyme A-transferase 1xr4A02
2AHWA 2OASA 1POIB 1K6DA 1XR4A 5DBNA 3GK7A 3CDKA 3OXOA 2HJ0A 2AHUA 1OOZA 1POIA 3RRLB 3K6MA 2NRBA 3QDQA 3DLXA 1M3EA 3D3UA 3RRLA 5DBNB 1OPEA 3EH7A 2AHVA 2NRCA 3CDKB 4KGBA 1O9LA 1OOYA
chains in the Genus database with same CATH superfamily
2AHWA 2OASA 1POIB 1K6DA 1XR4A 5DBNA 3GK7A 3CDKA 3OXOA 2HJ0A 2AHUA 1OOZA 1POIA 3RRLB 3K6MA 2NRBA 3QDQA 3DLXA 1M3EA 3D3UA 3RRLA 5DBNB 1OPEA 3EH7A 2AHVA 2NRCA 3CDKB 4KGBA 1O9LA 1OOYA
chains in the Genus database with same CATH topology
2AHWA 2OASA 1POIB 1K6DA 1XR4A 5DBNA 3GK7A 3CDKA 3OXOA 2HJ0A 2AHUA 1OOZA 1POIA 3RRLB 3K6MA 2NRBA 3QDQA 3DLXA 1M3EA 3D3UA 3RRLA 5DBNB 1OPEA 3EH7A 2AHVA 2NRCA 3CDKB 4KGBA 1O9LA 1OOYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2AHW A;  2OAS A;  1POI B;  1K6D A;  1XR4 A;  5DBN A;  3GK7 A;  3CDK A;  3OXO A;  2HJ0 A;  2AHU A;  1OOZ A;  1POI A;  3RRL B;  3K6M A;  2NRB A;  3QDQ A;  3DLX A;  1M3E A;  3D3U A;  3RRL A;  5DBN B;  1OPE A;  3EH7 A;  2AHV A;  2NRC A;  3CDK B;  4KGB A;  1O9L A;  1OOY A; 
#chains in the Genus database with same CATH topology
 2AHW A;  2OAS A;  1POI B;  1K6D A;  1XR4 A;  5DBN A;  3GK7 A;  3CDK A;  3OXO A;  2HJ0 A;  2AHU A;  1OOZ A;  1POI A;  3RRL B;  3K6M A;  2NRB A;  3QDQ A;  3DLX A;  1M3E A;  3D3U A;  3RRL A;  5DBN B;  1OPE A;  3EH7 A;  2AHV A;  2NRC A;  3CDK B;  4KGB A;  1O9L A;  1OOY A; 
#chains in the Genus database with same CATH homology
 2AHW A;  2OAS A;  1POI B;  1K6D A;  1XR4 A;  5DBN A;  3GK7 A;  3CDK A;  3OXO A;  2HJ0 A;  2AHU A;  1OOZ A;  1POI A;  3RRL B;  3K6M A;  2NRB A;  3QDQ A;  3DLX A;  1M3E A;  3D3U A;  3RRL A;  5DBN B;  1OPE A;  3EH7 A;  2AHV A;  2NRC A;  3CDK B;  4KGB A;  1O9L A;  1OOY A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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